├── FastGLOBETROTTER_Instructions.pdf ├── FastGLOBETROTTER_Tutorial.pdf ├── LICENCE.txt ├── README.md ├── fastGLOBETROTTER.R ├── fastGLOBETROTTERCompanion.c └── tutorial ├── AllFrenchYoruba30gen50prop.boot.txt ├── AllFrenchYoruba30gen50prop.main.pdf ├── AllFrenchYoruba30gen50prop.main.txt ├── AllFrenchYoruba30gen50prop.main_curves.txt ├── AllFrenchYoruba30gen50propchr21.txt ├── AllFrenchYoruba30gen50propchr21_DonorvTarget.samples.out.gz ├── AllFrenchYoruba30gen50propchr22.txt ├── AllFrenchYoruba30gen50propchr22_DonorvTarget.samples.out.gz ├── AllFrenchYoruba30gen50propchrAll_DonorvALL.chunklengths.out ├── Chrom21.recomrates ├── Chrom22.recomrates ├── ChromoPainterOutputSum.pl ├── ChromoPainterv2EstimatedNeMutExtractEM.pl ├── impute2chromopainter2.pl ├── individual.txt ├── output_estimateEM_Chr21.EMprobs.out ├── output_estimateEM_Chr22.EMprobs.out ├── paramfile.txt ├── popfile.txt ├── popfileSurr.txt ├── recomfile.txt └── samplefile.txt /FastGLOBETROTTER_Instructions.pdf: 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