├── .Rbuildignore ├── .Rproj.user ├── 454F7DD3 │ ├── console06 │ │ └── INDEX001 │ ├── cpp-definition-cache │ ├── pcs │ │ ├── files-pane.pper │ │ ├── source-pane.pper │ │ ├── windowlayoutstate.pper │ │ └── workbench-pane.pper │ ├── rmd-outputs │ ├── saved_source_markers │ └── sources │ │ └── per │ │ └── u │ │ ├── 5ED2A3DE │ │ └── 5ED2A3DE-contents ├── 4ED33FE3 │ ├── cpp-definition-cache │ ├── pcs │ │ ├── debug-breakpoints.pper │ │ ├── files-pane.pper │ │ ├── source-pane.pper │ │ ├── windowlayoutstate.pper │ │ └── workbench-pane.pper │ ├── persistent-state │ ├── rmd-outputs │ ├── saved_source_markers │ ├── sdb │ │ ├── per │ │ │ └── t │ │ │ │ ├── 40D10918 │ │ │ │ ├── 43AC8F96 │ │ │ │ ├── 487B3551 │ │ │ │ ├── 68D3076D │ │ │ │ ├── 9D77B1C8 │ │ │ │ └── CDBD42E1 │ │ └── prop │ │ │ ├── 10266048 │ │ │ ├── 25798004 │ │ │ ├── 116A82F2 │ │ │ ├── 145B276E │ │ │ ├── 1B4F654D │ │ │ ├── 1DD3699C │ │ │ ├── 22DBDB19 │ │ │ ├── 25103B24 │ │ │ ├── 27D09C73 │ │ │ ├── 2F6CC180 │ │ │ ├── 2FC6DD66 │ │ │ ├── 33447C55 │ │ │ ├── 3680F4E │ │ │ ├── 3BC6C21C │ │ │ ├── 3FD25796 │ │ │ ├── 4098E757 │ │ │ ├── 516D64A1 │ │ │ ├── 58F36198 │ │ │ ├── 5A92DC74 │ │ │ ├── 678F7769 │ │ │ ├── 73F2F4BC │ │ │ ├── 752CEFD3 │ │ │ ├── 7F317F10 │ │ │ ├── 81191E46 │ │ │ ├── 853DFE20 │ │ │ ├── 90A82CF0 │ │ │ ├── 9C2D9F7 │ │ │ ├── A13EC6DD │ │ │ ├── A463ED1D │ │ │ ├── AAE26DA1 │ │ │ ├── AD66D302 │ │ │ ├── ADFA56F5 │ │ │ ├── B2462736 │ │ │ ├── B8752AC │ │ │ ├── C7B6B6DC │ │ │ ├── CCF077C3 │ │ │ ├── CE3FAEDC │ │ │ ├── CFD0E4D6 │ │ │ ├── D25A016E │ │ │ ├── D431E36D │ │ │ ├── D46C89D9 │ │ │ ├── D5C8C0F7 │ │ │ ├── D7914C68 │ │ │ ├── D881C192 │ │ │ ├── D90D5CEA │ │ │ ├── DB88AECD │ │ │ ├── DE46C9B2 │ │ │ ├── DED0F5D0 │ │ │ ├── E540C340 │ │ │ ├── E798F8EA │ │ │ ├── EAC49045 │ │ │ ├── F04D7BD5 │ │ │ ├── F1C4C39 │ │ │ ├── F729B2B8 │ │ │ └── INDEX │ └── session-persistent-state ├── C20BFF5F │ ├── build_options │ ├── cpp-definition-cache │ ├── ctx │ │ └── ctx-43595 │ │ │ ├── search_path │ │ │ ├── package_paths │ │ │ └── search_path_elements │ │ │ └── settings │ ├── pcs │ │ ├── files-pane.pper │ │ ├── source-pane.pper │ │ ├── windowlayoutstate.pper │ │ └── workbench-pane.pper │ ├── persistent-state │ ├── rmd-outputs │ ├── saved_source_markers │ ├── sdb │ │ ├── per │ │ │ └── t │ │ │ │ └── A7F23B65 │ │ └── prop │ │ │ ├── 1D5460E0 │ │ │ ├── 2D607684 │ │ │ ├── 34DDC55A │ │ │ ├── 37F7EA5D │ │ │ ├── 39978E3F │ │ │ ├── 3B7D730B │ │ │ ├── 5095085B │ │ │ ├── 539B7E56 │ │ │ ├── 54F228CF │ │ │ ├── 5BE09C26 │ │ │ ├── 5E6F8A1E │ │ │ ├── 623455CB │ │ │ ├── 691B36DF │ │ │ ├── 697934A3 │ │ │ ├── 9AEC8362 │ │ │ ├── 9E40E44 │ │ │ ├── B2E723D3 │ │ │ ├── F84BA1CD │ │ │ └── INDEX │ ├── session-persistent-state │ └── vcs_options ├── CCA4DF3B │ ├── console06 │ │ └── INDEX001 │ ├── cpp-definition-cache │ ├── pcs │ │ ├── files-pane.pper │ │ ├── source-pane.pper │ │ ├── windowlayoutstate.pper │ │ └── workbench-pane.pper │ ├── rmd-outputs │ ├── saved_source_markers │ └── sources │ │ ├── per │ │ └── t │ │ │ ├── 4CC92F37 │ │ │ ├── 4CC92F37-contents │ │ │ ├── 994B7A8C │ │ │ ├── 994B7A8C-contents │ │ │ ├── D338EEEE │ │ │ ├── D338EEEE-contents │ │ │ ├── D849A660 │ │ │ └── D849A660-contents │ │ └── prop │ │ ├── 1DC398E6 │ │ ├── 2E925340 │ │ ├── 3A7D9A79 │ │ ├── 5A302EE6 │ │ ├── 84297AF6 │ │ ├── 92CBE76E │ │ ├── 93B48BA3 │ │ ├── B48453AB │ │ ├── C1474A20 │ │ ├── C1BE46F8 │ │ ├── D13871B5 │ │ ├── DA471997 │ │ ├── DB16578C │ │ ├── DC8CCB7D │ │ ├── EE16000D │ │ ├── F56E9AA2 │ │ ├── F5AF19E6 │ │ ├── FE30BEC3 │ │ └── INDEX ├── D46573F8 │ ├── build_options │ ├── console06 │ │ ├── E42385ED │ │ ├── E42385ED.env │ │ └── INDEX001 │ ├── cpp-definition-cache │ ├── pcs │ │ ├── debug-breakpoints.pper │ │ ├── files-pane.pper │ │ ├── source-pane.pper │ │ ├── windowlayoutstate.pper │ │ └── workbench-pane.pper │ ├── persistent-state │ ├── rmd-outputs │ ├── saved_source_markers │ └── sources │ │ ├── prop │ │ ├── 28184444 │ │ ├── 90561334 │ │ ├── 1692B0 │ │ ├── 16BF40B5 │ │ ├── 1B06F89 │ │ ├── 1F8BEB03 │ │ ├── 20734E87 │ │ ├── 2821F45F │ │ ├── 2B750134 │ │ ├── 2EE66BFB │ │ ├── 30A985F8 │ │ ├── 30E0D90 │ │ ├── 329C5648 │ │ ├── 48AC2EFF │ │ ├── 48F19CB1 │ │ ├── 4B8203A5 │ │ ├── 502CC685 │ │ ├── 54A7EF80 │ │ ├── 5E852DCD │ │ ├── 6308215C │ │ ├── 684D9AFB │ │ ├── 6869E2EF │ │ ├── 6F4412DB │ │ ├── 748D0BA5 │ │ ├── 77A6344D │ │ ├── 8DD275FF │ │ ├── 995E087D │ │ ├── A51E928A │ │ ├── A6289A6D │ │ ├── A6CE2E48 │ │ ├── A8F200FF │ │ ├── AB048C7B │ │ ├── B0ACC44 │ │ ├── B21A34FE │ │ ├── B2AE81D9 │ │ ├── B66917F7 │ │ ├── B7E97374 │ │ ├── BA95574B │ │ ├── C14FA771 │ │ ├── C799AD89 │ │ ├── C7BFCEBD │ │ ├── C8324DF9 │ │ ├── C979067C │ │ ├── D358FCC6 │ │ ├── D4BCA408 │ │ ├── D8C79CBB │ │ ├── D967D3E3 │ │ ├── DE081089 │ │ ├── DF68C362 │ │ ├── DFB9D79C │ │ ├── EA0EC806 │ │ ├── EC5E7BE6 │ │ ├── F5A58818 │ │ └── INDEX │ │ └── s-571B5F3B │ │ ├── 13C65E5C-contents │ │ ├── 2EBDBF02-contents │ │ ├── 326B032F-contents │ │ ├── 3DF2939D-contents │ │ ├── 59956B1F-contents │ │ ├── 63529059-contents │ │ ├── 678E8B10-contents │ │ ├── 6A950F0F-contents │ │ ├── 818E9FA7-contents │ │ ├── 92F2DC19-contents │ │ ├── AA49A17D-contents │ │ ├── B9D32A84-contents │ │ ├── C2881DE0-contents │ │ ├── CDAECCA2 │ │ ├── CDAECCA2-contents │ │ ├── D267204B-contents │ │ ├── EEB997E6-contents │ │ ├── F2CAF5C8-contents │ │ └── lock_file └── shared │ └── notebooks │ ├── patch-chunk-names │ └── paths ├── .github ├── ISSUE_TEMPLATE │ ├── bug-report.md │ ├── feature-request.md │ └── to-do.md └── workflows │ └── r.yml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── NEWS ├── R ├── CFA.R ├── EBICglasso.qgraph.R ├── EGA.R ├── EGA.estimate.R ├── EGA.fit.R ├── EGAnet.R ├── EGM.optimizations.R ├── Embed.R ├── LCT.R ├── S3plots.R ├── TMFG.R ├── UVA.R ├── auto.correlate.R ├── boot.ergoInfo.R ├── boot.wmt.R ├── bootEGA.R ├── color_palette_EGA.R ├── community.compare.R ├── community.consensus.R ├── community.detection.R ├── community.homogenize.R ├── community.unidimensional.R ├── compare.EGA.plots.R ├── convert2igraph.R ├── convert2tidygraph.R ├── cosine.R ├── depression.R ├── development.R ├── dimensionStability.R ├── dnn.weights.R ├── dynEGA.R ├── dynEGA.ind.pop.R ├── dynamic.network.compare.R ├── ega.wmt.R ├── entropyFit.R ├── ergoInfo.R ├── frobenius.R ├── genTEFI.R ├── glla.R ├── helpers.R ├── hierEGA.R ├── igraph2matrix.R ├── infoCluster.R ├── information.R ├── intelligenceBattery.R ├── invariance.R ├── itemDiagnostics.R ├── itemStability.R ├── jsd.R ├── jsd.ergodicity.R ├── known.graph.R ├── mctest.ergoInfo.R ├── modularity.R ├── net.loads.R ├── net.scores.R ├── network.compare.R ├── network.estimation.R ├── network.fit.R ├── network.predictability.R ├── network.regularization.R ├── oldUVA.R ├── oldsimEGM.R ├── optimism.R ├── plot_clusters.R ├── polychoric.matrix.R ├── prime.num.R ├── regularization.R ├── riEGA.R ├── rng_test.R ├── sim.dynEGA.R ├── simDFM.R ├── simEGM.R ├── tefi.R ├── tefi.compare.R ├── totalCor.R ├── totalCorMat.R ├── utils-EGAnet.R ├── vn.entropy.R ├── wmt2.R ├── wto.R └── zzz.R ├── Readme.md ├── data ├── .DS_Store ├── boot.wmt.RData ├── depression.RData ├── dnn.weights.RData ├── ega.wmt.RData ├── intelligenceBattery.RData ├── optimism.RData ├── prime.num.RData ├── sim.dynEGA.RData └── wmt2.RData ├── inst ├── CITATION ├── EGAnet_hex.png ├── EGAnet_hex_2.png └── eganet-qr.png ├── man ├── CFA.Rd ├── EBICglasso.qgraph.Rd ├── EGA.Rd ├── EGA.estimate.Rd ├── EGA.fit.Rd ├── EGAnet-package.Rd ├── EGAnet-plot.Rd ├── Embed.Rd ├── LCT.Rd ├── TMFG.Rd ├── UVA.Rd ├── auto.correlate.Rd ├── boot.ergoInfo.Rd ├── boot.wmt.Rd ├── bootEGA.Rd ├── color_palette_EGA.Rd ├── community.compare.Rd ├── community.consensus.Rd ├── community.detection.Rd ├── community.homogenize.Rd ├── community.unidimensional.Rd ├── compare.EGA.plots.Rd ├── convert2igraph.Rd ├── convert2tidygraph.Rd ├── cosine.Rd ├── depression.Rd ├── dimensionStability.Rd ├── dnn.weights.Rd ├── dynEGA.Rd ├── dynEGA.ind.pop.Rd ├── dynamic.network.compare.Rd ├── ega.wmt.Rd ├── entropyFit.Rd ├── ergoInfo.Rd ├── frobenius.Rd ├── genTEFI.Rd ├── glla.Rd ├── hierEGA.Rd ├── igraph2matrix.Rd ├── infoCluster.Rd ├── information.Rd ├── intelligenceBattery.Rd ├── invariance.Rd ├── itemDiagnostics.Rd ├── itemStability.Rd ├── jsd.Rd ├── known.graph.Rd ├── modularity.Rd ├── net.loads.Rd ├── net.scores.Rd ├── network.compare.Rd ├── network.estimation.Rd ├── network.fit.Rd ├── network.predictability.Rd ├── network.regularization.Rd ├── optimism.Rd ├── plot_clusters.Rd ├── polychoric.matrix.Rd ├── prime.num.Rd ├── riEGA.Rd ├── sim.dynEGA.Rd ├── simDFM.Rd ├── simEGM.Rd ├── tefi.Rd ├── tefi.compare.Rd ├── totalCor.Rd ├── totalCorMat.Rd ├── vn.entropy.Rd ├── wmt2.Rd └── wto.Rd └── src ├── init.c ├── modularity.c ├── modularity.h ├── nanotime.c ├── nanotime.h ├── polychoric_matrix.c ├── polychoric_matrix.h ├── signed_modularity.c ├── xoshiro.c ├── xoshiro.h ├── ziggurat.c └── ziggurat.h /.Rbuildignore: -------------------------------------------------------------------------------- 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