├── .gitattributes ├── .gitignore ├── .travis.yml ├── Jenkinsfile ├── LICENCE ├── MANIFEST.in ├── README.md ├── __init__.py ├── docs ├── .nojekyll ├── Makefile ├── build │ └── html │ │ ├── .nojekyll │ │ ├── _modules │ │ ├── index.html │ │ └── tensorgraph │ │ │ ├── cost.html │ │ │ ├── data_iterator.html │ │ │ ├── dataset │ │ │ ├── cifar10.html │ │ │ ├── cifar100.html │ │ │ ├── mnist.html │ │ │ └── preprocess.html │ │ │ ├── graph.html │ │ │ ├── layers │ │ │ ├── activation.html │ │ │ ├── backbones.html │ │ │ ├── cast.html │ │ │ ├── conv.html │ │ │ ├── linear.html │ │ │ ├── merge.html │ │ │ ├── misc.html │ │ │ ├── noise.html │ │ │ ├── normalization.html │ │ │ ├── recurrent.html │ │ │ ├── sampling.html │ │ │ └── template.html │ │ │ ├── models_zoo │ │ │ ├── airnet │ │ │ │ ├── model.html │ │ │ │ └── train.html │ │ │ ├── attention_unet │ │ │ │ ├── model.html │ │ │ │ └── train.html │ │ │ ├── densenet │ │ │ │ ├── model.html │ │ │ │ └── train.html │ │ │ ├── hed_modified │ │ │ │ ├── model.html │ │ │ │ └── train.html │ │ │ └── heteronet │ │ │ │ ├── layers.html │ │ │ │ ├── model.html │ │ │ │ └── train.html │ │ │ ├── node.html │ │ │ ├── progbar.html │ │ │ ├── sequential.html │ │ │ ├── stopper.html │ │ │ ├── trainobject.html │ │ │ └── utils.html │ │ ├── _sources │ │ ├── index.rst.txt │ │ └── modules │ │ │ ├── modules.rst.txt │ │ │ ├── tensorgraph.dataset.rst.txt │ │ │ ├── tensorgraph.layers.rst.txt │ │ │ ├── tensorgraph.models_zoo.airnet.rst.txt │ │ │ ├── tensorgraph.models_zoo.attention_unet.rst.txt │ │ │ ├── tensorgraph.models_zoo.densenet.rst.txt │ │ │ ├── tensorgraph.models_zoo.hed_modified.rst.txt │ │ │ ├── tensorgraph.models_zoo.heteronet.rst.txt │ │ │ ├── tensorgraph.models_zoo.rst.txt │ │ │ ├── tensorgraph.models_zoo.unet.rst.txt │ │ │ └── tensorgraph.rst.txt │ │ ├── _static │ │ ├── ajax-loader.gif │ │ ├── basic.css │ │ ├── comment-bright.png │ │ ├── comment-close.png │ │ ├── comment.png │ │ ├── css │ │ │ ├── badge_only.css │ │ │ └── theme.css │ │ ├── doctools.js │ │ ├── documentation_options.js │ │ ├── down-pressed.png │ │ ├── down.png │ │ ├── file.png │ │ ├── fonts │ │ │ ├── Inconsolata-Bold.ttf │ │ │ ├── Inconsolata-Regular.ttf │ │ │ ├── Lato-Bold.ttf │ │ │ ├── Lato-BoldItalic.ttf │ │ │ ├── Lato-Italic.ttf │ │ │ ├── Lato-Regular.ttf │ │ │ ├── RobotoSlab-Bold.ttf │ │ │ ├── RobotoSlab-Regular.ttf │ │ │ ├── fontawesome-webfont.eot │ │ │ ├── fontawesome-webfont.svg │ │ │ ├── fontawesome-webfont.ttf │ │ │ ├── fontawesome-webfont.woff │ │ │ └── fontawesome-webfont.woff2 │ │ ├── jquery-3.2.1.js │ │ ├── jquery.js │ │ ├── js │ │ │ ├── modernizr.min.js │ │ │ └── theme.js │ │ ├── minus.png │ │ ├── plus.png │ │ ├── pygments.css │ │ ├── searchtools.js │ │ ├── underscore-1.3.1.js │ │ ├── underscore.js │ │ ├── up-pressed.png │ │ ├── up.png │ │ └── websupport.js │ │ ├── genindex.html │ │ ├── index.html │ │ ├── modules │ │ ├── modules.html │ │ ├── tensorgraph.dataset.html │ │ ├── tensorgraph.html │ │ ├── tensorgraph.layers.html │ │ ├── tensorgraph.models_zoo.airnet.html │ │ ├── tensorgraph.models_zoo.attention_unet.html │ │ ├── tensorgraph.models_zoo.densenet.html │ │ ├── tensorgraph.models_zoo.hed_modified.html │ │ ├── tensorgraph.models_zoo.heteronet.html │ │ ├── tensorgraph.models_zoo.html │ │ └── tensorgraph.models_zoo.unet.html │ │ ├── objects.inv │ │ ├── py-modindex.html │ │ ├── search.html │ │ └── searchindex.js ├── conf.py ├── index.html ├── index.md ├── index.rst ├── make.bat ├── modules │ ├── modules.rst │ ├── tensorgraph.dataset.rst │ ├── tensorgraph.layers.rst │ ├── tensorgraph.models_zoo.airnet.rst │ ├── tensorgraph.models_zoo.attention_unet.rst │ ├── tensorgraph.models_zoo.densenet.rst │ ├── tensorgraph.models_zoo.hed_modified.rst │ ├── tensorgraph.models_zoo.heteronet.rst │ ├── tensorgraph.models_zoo.rst │ ├── tensorgraph.models_zoo.unet.rst │ └── tensorgraph.rst └── readme.md ├── draw ├── graph.png ├── hsoftmax.png └── transferlearn.png ├── examples ├── __init__.py ├── charcnn_text_classifier.py ├── cifar10_allcnn.py ├── example.py ├── hierachical_softmax.py ├── mnist_cnn.py ├── multi_gpus_horovod.py └── tweets_large.csv ├── exclude.txt ├── pipupdate.sh ├── setup.cfg ├── setup.py ├── tensorgraph ├── __init__.py ├── cost.py ├── data_iterator.py ├── dataset │ ├── __init__.py │ ├── cifar10.py │ ├── cifar100.py │ ├── mnist.py │ └── preprocess.py ├── graph.py ├── layers │ ├── __init__.py │ ├── activation.py │ ├── backbones.py │ ├── cast.py │ ├── conv.py │ ├── linear.py │ ├── merge.py │ ├── misc.py │ ├── noise.py │ ├── normalization.py │ ├── recurrent.py │ ├── sampling.py │ └── template.py ├── models_zoo │ ├── __init__.py │ ├── aibraintumormodel │ │ ├── .gitignore │ │ ├── README.md │ │ ├── __init__.py │ │ ├── main_train.py │ │ ├── model_C3 │ │ │ └── train_model_C3.ini │ │ ├── model_C4 │ │ │ └── train_model_C4.ini │ │ ├── model_C4R │ │ │ └── train_model_C4R.ini │ │ ├── model_C5 │ │ │ └── train_model_C5.ini │ │ ├── model_C5XS │ │ │ └── train_model_C5XS.ini │ │ ├── model_CR │ │ │ └── train_model_CR.ini │ │ ├── nn │ │ │ ├── __init__.py │ │ │ ├── data │ │ │ │ ├── __init__.py │ │ │ │ └── data_train_hvd.py │ │ │ ├── model │ │ │ │ ├── CommonBlocks.py │ │ │ │ ├── __init__.py │ │ │ │ ├── model_C3.py │ │ │ │ ├── model_C4.py │ │ │ │ ├── model_C4R.py │ │ │ │ ├── model_C5.py │ │ │ │ ├── model_C5XS.py │ │ │ │ └── model_CR.py │ │ │ └── run │ │ │ │ ├── __init__.py │ │ │ │ ├── configReader.py │ │ │ │ ├── costfunction.py │ │ │ │ ├── radiomicsFeatures.py │ │ │ │ └── train.py │ │ ├── run_mpi.sh │ │ └── run_nonmpi.sh │ ├── airnet │ │ ├── __init__.py │ │ ├── model.py │ │ └── train.py │ ├── attention_unet │ │ ├── README.md │ │ ├── __init__.py │ │ ├── img │ │ │ └── attention_unet.jpg │ │ ├── model.py │ │ └── train.py │ ├── densenet │ │ ├── README.md │ │ ├── __init__.py │ │ ├── img │ │ │ ├── level1.png │ │ │ ├── level2.png │ │ │ └── level3.png │ │ ├── model.py │ │ └── train.py │ ├── echocardiac │ │ └── dilated_unet │ │ │ ├── README.md │ │ │ ├── __init__.py │ │ │ ├── dilated_unet.png │ │ │ ├── model.py │ │ │ └── train.py │ ├── hed_modified │ │ ├── __init__.py │ │ ├── img │ │ │ ├── level1.png │ │ │ └── level2.png │ │ ├── model.py │ │ └── train.py │ ├── heteronet │ │ ├── README.md │ │ ├── __init__.py │ │ ├── img │ │ │ ├── level1.png │ │ │ ├── level2.png │ │ │ ├── level3_1.png │ │ │ └── level3_2.png │ │ ├── layers.py │ │ ├── model.py │ │ └── train.py │ ├── image_search │ │ ├── __init__.py │ │ ├── model.py │ │ ├── train.py │ │ └── triplet_or_hist_loss.py │ └── unet │ │ ├── README.md │ │ ├── __init__.py │ │ ├── model.py │ │ └── train.py ├── node.py ├── preprocessing.py ├── progbar.py ├── sequential.py ├── stopper.py ├── trainobject.py └── utils.py └── test ├── __init__.py ├── cost_test.py ├── data_iterator_test.py ├── layer_backbones_test.py ├── layer_conv_test.py ├── layer_linear_test.py ├── layer_merge_test.py ├── layer_misc_test.py ├── layer_noise_test.py ├── models_zoo ├── aibraintumormodel │ ├── model_C3_test.py │ ├── model_C4R_test.py │ ├── model_C5XS_test.py │ ├── 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