├── .gitignore ├── .readthedocs.yml ├── .travis.yml ├── LICENSE ├── README.md ├── attic ├── orbit_RV.py └── orbit_conventional.py ├── doc ├── .static │ └── notebooks │ │ ├── scripts.ipynb │ │ └── tutorial.ipynb ├── Makefile ├── changelog.rst ├── conf.py ├── configuration.rst ├── covariance.rst ├── data.rst ├── getting-started.rst ├── index.rst ├── models.rst ├── orbit.rst ├── quickstart.md ├── reconstruction.rst ├── sampling.rst ├── scripts.rst └── tutorial.rst ├── output.gif ├── psoap ├── __init__.py ├── constants.py ├── covariance.py ├── data.py ├── data │ ├── 41Dra │ │ ├── README.md │ │ ├── astro.dat │ │ └── rv.dat │ ├── GJ3305AB │ │ ├── astro.txt │ │ └── rv.txt │ ├── Gl417BC │ │ └── data.txt │ ├── Gl570BC │ │ ├── astro.txt │ │ ├── rv1.txt │ │ └── rv2.txt │ ├── HD10009 │ │ ├── astro.txt │ │ ├── rv1.txt │ │ └── rv2.txt │ ├── Sigma248 │ │ ├── astro.txt │ │ └── rv.txt │ ├── chunks.dat │ ├── config.SB1.yaml │ ├── config.SB2.yaml │ ├── config.ST3.yaml │ └── masks.dat ├── initialize.py ├── matrix_functions.pyx ├── orbit.py ├── orbit_astrometry.py ├── plot_samples.py ├── sample.py ├── sample_parallel.py ├── samplers.py └── utils.py ├── requirements.txt ├── scripts ├── TRES │ ├── README.md │ ├── StuffHDF5.py │ ├── TRESio_astropy.py │ ├── extract_files_BCV.sh │ ├── fname_to_date.py │ ├── plot_all_orders.py │ ├── plot_order.py │ └── rectification.txt ├── fake │ ├── make_fake_SB1.py │ ├── make_fake_SB2.py │ └── make_fake_ST3.py ├── make_fake_primary_data.py ├── make_fake_secondary_data.py ├── psoap_apply_calibration.py ├── psoap_gelman_rubin.py ├── psoap_generate_chunks.py ├── psoap_generate_masks.py ├── psoap_hdf5_exploder.py ├── psoap_plot_calibration.py ├── psoap_plot_orbit.py ├── psoap_predict_SB2.py ├── psoap_predict_ST3.py ├── psoap_process_calibration_ST3.py ├── psoap_process_chunks.py ├── psoap_process_masks.py ├── psoap_retrieve_SB2.py ├── psoap_retrieve_SB2_draw.py ├── psoap_retrieve_ST3.py └── psoap_retrieve_ST3_draw.py ├── setup.py └── tests ├── test_orbit.py ├── test_orbit_astrometry_41Dra.py ├── test_orbit_astrometry_GJ3305AB.py ├── test_orbit_astrometry_Gl417BC.py ├── test_orbit_astrometry_Gl570BC.py ├── test_orbit_astrometry_HD10009.py ├── test_orbit_astrometry_Sigma248.py └── test_orbit_astrometry_triple.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/.gitignore -------------------------------------------------------------------------------- /.readthedocs.yml: -------------------------------------------------------------------------------- 1 | name: psoap 2 | 3 | python: 4 | setup_py_install: true 5 | version: 3.5 6 | -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/.travis.yml -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/README.md -------------------------------------------------------------------------------- /attic/orbit_RV.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/attic/orbit_RV.py -------------------------------------------------------------------------------- /attic/orbit_conventional.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/attic/orbit_conventional.py -------------------------------------------------------------------------------- /doc/.static/notebooks/scripts.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/.static/notebooks/scripts.ipynb -------------------------------------------------------------------------------- /doc/.static/notebooks/tutorial.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/.static/notebooks/tutorial.ipynb -------------------------------------------------------------------------------- /doc/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/Makefile -------------------------------------------------------------------------------- /doc/changelog.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/changelog.rst -------------------------------------------------------------------------------- /doc/conf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/conf.py -------------------------------------------------------------------------------- /doc/configuration.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/configuration.rst -------------------------------------------------------------------------------- /doc/covariance.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/covariance.rst -------------------------------------------------------------------------------- /doc/data.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/data.rst -------------------------------------------------------------------------------- /doc/getting-started.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/getting-started.rst -------------------------------------------------------------------------------- /doc/index.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/index.rst -------------------------------------------------------------------------------- /doc/models.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/models.rst -------------------------------------------------------------------------------- /doc/orbit.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/orbit.rst -------------------------------------------------------------------------------- /doc/quickstart.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/quickstart.md -------------------------------------------------------------------------------- /doc/reconstruction.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/reconstruction.rst -------------------------------------------------------------------------------- /doc/sampling.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/sampling.rst -------------------------------------------------------------------------------- /doc/scripts.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/scripts.rst -------------------------------------------------------------------------------- /doc/tutorial.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/doc/tutorial.rst -------------------------------------------------------------------------------- /output.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/output.gif -------------------------------------------------------------------------------- /psoap/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/__init__.py -------------------------------------------------------------------------------- /psoap/constants.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/constants.py -------------------------------------------------------------------------------- /psoap/covariance.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/covariance.py -------------------------------------------------------------------------------- /psoap/data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data.py -------------------------------------------------------------------------------- /psoap/data/41Dra/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/41Dra/README.md -------------------------------------------------------------------------------- /psoap/data/41Dra/astro.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/41Dra/astro.dat -------------------------------------------------------------------------------- /psoap/data/41Dra/rv.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/41Dra/rv.dat -------------------------------------------------------------------------------- /psoap/data/GJ3305AB/astro.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/GJ3305AB/astro.txt -------------------------------------------------------------------------------- /psoap/data/GJ3305AB/rv.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/GJ3305AB/rv.txt -------------------------------------------------------------------------------- /psoap/data/Gl417BC/data.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Gl417BC/data.txt -------------------------------------------------------------------------------- /psoap/data/Gl570BC/astro.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Gl570BC/astro.txt -------------------------------------------------------------------------------- /psoap/data/Gl570BC/rv1.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Gl570BC/rv1.txt -------------------------------------------------------------------------------- /psoap/data/Gl570BC/rv2.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Gl570BC/rv2.txt -------------------------------------------------------------------------------- /psoap/data/HD10009/astro.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/HD10009/astro.txt -------------------------------------------------------------------------------- /psoap/data/HD10009/rv1.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/HD10009/rv1.txt -------------------------------------------------------------------------------- /psoap/data/HD10009/rv2.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/HD10009/rv2.txt -------------------------------------------------------------------------------- /psoap/data/Sigma248/astro.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Sigma248/astro.txt -------------------------------------------------------------------------------- /psoap/data/Sigma248/rv.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/Sigma248/rv.txt -------------------------------------------------------------------------------- /psoap/data/chunks.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/chunks.dat -------------------------------------------------------------------------------- /psoap/data/config.SB1.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/config.SB1.yaml -------------------------------------------------------------------------------- /psoap/data/config.SB2.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/config.SB2.yaml -------------------------------------------------------------------------------- /psoap/data/config.ST3.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/data/config.ST3.yaml -------------------------------------------------------------------------------- /psoap/data/masks.dat: -------------------------------------------------------------------------------- 1 | wl0 wl1 t0 t1 2 | -------------------------------------------------------------------------------- /psoap/initialize.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/initialize.py -------------------------------------------------------------------------------- /psoap/matrix_functions.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/matrix_functions.pyx -------------------------------------------------------------------------------- /psoap/orbit.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/orbit.py -------------------------------------------------------------------------------- /psoap/orbit_astrometry.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/orbit_astrometry.py -------------------------------------------------------------------------------- /psoap/plot_samples.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/plot_samples.py -------------------------------------------------------------------------------- /psoap/sample.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/sample.py -------------------------------------------------------------------------------- /psoap/sample_parallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/sample_parallel.py -------------------------------------------------------------------------------- /psoap/samplers.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/samplers.py -------------------------------------------------------------------------------- /psoap/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/psoap/utils.py -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/requirements.txt -------------------------------------------------------------------------------- /scripts/TRES/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/README.md -------------------------------------------------------------------------------- /scripts/TRES/StuffHDF5.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/StuffHDF5.py -------------------------------------------------------------------------------- /scripts/TRES/TRESio_astropy.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/TRESio_astropy.py -------------------------------------------------------------------------------- /scripts/TRES/extract_files_BCV.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/extract_files_BCV.sh -------------------------------------------------------------------------------- /scripts/TRES/fname_to_date.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/fname_to_date.py -------------------------------------------------------------------------------- /scripts/TRES/plot_all_orders.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/plot_all_orders.py -------------------------------------------------------------------------------- /scripts/TRES/plot_order.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/plot_order.py -------------------------------------------------------------------------------- /scripts/TRES/rectification.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/TRES/rectification.txt -------------------------------------------------------------------------------- /scripts/fake/make_fake_SB1.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/fake/make_fake_SB1.py -------------------------------------------------------------------------------- /scripts/fake/make_fake_SB2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/fake/make_fake_SB2.py -------------------------------------------------------------------------------- /scripts/fake/make_fake_ST3.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/fake/make_fake_ST3.py -------------------------------------------------------------------------------- /scripts/make_fake_primary_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/make_fake_primary_data.py -------------------------------------------------------------------------------- /scripts/make_fake_secondary_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/make_fake_secondary_data.py -------------------------------------------------------------------------------- /scripts/psoap_apply_calibration.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_apply_calibration.py -------------------------------------------------------------------------------- /scripts/psoap_gelman_rubin.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_gelman_rubin.py -------------------------------------------------------------------------------- /scripts/psoap_generate_chunks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_generate_chunks.py -------------------------------------------------------------------------------- /scripts/psoap_generate_masks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_generate_masks.py -------------------------------------------------------------------------------- /scripts/psoap_hdf5_exploder.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_hdf5_exploder.py -------------------------------------------------------------------------------- /scripts/psoap_plot_calibration.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_plot_calibration.py -------------------------------------------------------------------------------- /scripts/psoap_plot_orbit.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_plot_orbit.py -------------------------------------------------------------------------------- /scripts/psoap_predict_SB2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_predict_SB2.py -------------------------------------------------------------------------------- /scripts/psoap_predict_ST3.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_predict_ST3.py -------------------------------------------------------------------------------- /scripts/psoap_process_calibration_ST3.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_process_calibration_ST3.py -------------------------------------------------------------------------------- /scripts/psoap_process_chunks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_process_chunks.py -------------------------------------------------------------------------------- /scripts/psoap_process_masks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_process_masks.py -------------------------------------------------------------------------------- /scripts/psoap_retrieve_SB2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_retrieve_SB2.py -------------------------------------------------------------------------------- /scripts/psoap_retrieve_SB2_draw.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_retrieve_SB2_draw.py -------------------------------------------------------------------------------- /scripts/psoap_retrieve_ST3.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_retrieve_ST3.py -------------------------------------------------------------------------------- /scripts/psoap_retrieve_ST3_draw.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/scripts/psoap_retrieve_ST3_draw.py -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/setup.py -------------------------------------------------------------------------------- /tests/test_orbit.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_41Dra.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_41Dra.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_GJ3305AB.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_GJ3305AB.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_Gl417BC.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_Gl417BC.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_Gl570BC.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_Gl570BC.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_HD10009.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_HD10009.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_Sigma248.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_Sigma248.py -------------------------------------------------------------------------------- /tests/test_orbit_astrometry_triple.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iancze/PSOAP/HEAD/tests/test_orbit_astrometry_triple.py --------------------------------------------------------------------------------