├── .gitignore ├── LICENSE ├── README.md ├── all_names.txt ├── application ├── __init__.py ├── dataLibs.py ├── dirtylist.py ├── model.py ├── router.py ├── static │ ├── css │ │ ├── 404.css │ │ ├── base.css │ │ ├── detail.css │ │ ├── help.css │ │ ├── login.css │ │ ├── prism.css │ │ ├── profile.css │ │ ├── range.css │ │ ├── semantic │ │ │ ├── components │ │ │ │ ├── accordion.css │ │ │ │ ├── accordion.js │ │ │ │ ├── accordion.min.css │ │ │ │ ├── accordion.min.js │ │ │ │ ├── ad.css │ │ │ │ ├── ad.min.css │ │ │ │ ├── api.js │ │ │ │ ├── api.min.js │ │ │ │ ├── breadcrumb.css │ │ │ │ ├── breadcrumb.min.css │ │ │ │ ├── button.css │ │ │ │ ├── button.min.css │ │ │ │ ├── card.css │ │ │ │ ├── card.min.css │ │ │ │ ├── checkbox.css │ │ │ │ ├── checkbox.js │ │ │ │ ├── checkbox.min.css │ │ │ │ ├── checkbox.min.js │ │ │ │ ├── comment.css │ │ │ │ ├── comment.min.css │ │ │ │ ├── container.css │ │ │ │ ├── container.min.css │ │ │ │ ├── dimmer.css │ │ │ │ ├── dimmer.js │ │ │ │ ├── dimmer.min.css │ │ │ │ ├── dimmer.min.js │ │ │ │ ├── divider.css │ │ │ │ ├── divider.min.css │ │ │ │ ├── dropdown.css │ │ │ │ ├── dropdown.js │ │ │ │ ├── dropdown.min.css │ │ │ │ ├── dropdown.min.js │ │ │ │ ├── embed.css │ │ │ │ ├── embed.js │ │ │ │ ├── embed.min.css │ │ │ │ ├── embed.min.js │ │ │ │ ├── feed.css │ │ │ │ ├── feed.min.css │ │ │ │ ├── flag.css │ │ │ │ ├── flag.min.css │ │ │ │ ├── form.css │ │ │ │ ├── form.js │ │ │ │ ├── form.min.css │ │ │ │ ├── form.min.js │ │ │ │ ├── grid.css │ │ │ │ ├── grid.min.css │ │ │ │ ├── header.css │ │ │ │ ├── header.min.css │ │ │ │ ├── icon.css │ │ │ │ ├── icon.min.css │ │ │ │ ├── image.css │ │ │ │ ├── image.min.css │ │ │ │ ├── input.css │ │ │ │ ├── input.min.css │ │ │ │ ├── item.css │ │ │ │ ├── item.min.css │ │ │ │ ├── label.css │ │ │ │ ├── label.min.css │ │ │ │ ├── list.css │ │ │ │ ├── list.min.css │ │ │ │ ├── loader.css │ │ │ │ ├── loader.min.css │ │ │ │ ├── menu.css │ │ │ │ ├── menu.min.css │ │ │ │ ├── message.css │ │ │ │ ├── message.min.css │ │ │ │ ├── modal.css │ │ │ │ ├── modal.js │ │ │ │ ├── modal.min.css │ │ │ │ ├── modal.min.js │ │ │ │ ├── nag.css │ │ │ │ ├── nag.js │ │ │ │ ├── nag.min.css │ │ │ │ ├── nag.min.js │ │ │ │ ├── popup.css │ │ │ │ ├── popup.js │ │ │ │ ├── popup.min.css │ │ │ │ ├── popup.min.js │ │ │ │ ├── progress.css │ │ │ │ ├── progress.js │ │ │ │ ├── progress.min.css │ │ │ │ ├── progress.min.js │ │ │ │ ├── rail.css │ │ │ │ ├── rail.min.css │ │ │ │ ├── range.css │ │ │ │ ├── range.js │ │ │ │ ├── rating.css │ │ │ │ ├── rating.js │ │ │ │ ├── rating.min.css │ │ │ │ ├── rating.min.js │ │ │ │ ├── reset.css │ │ │ │ ├── reset.min.css │ │ │ │ ├── reveal.css │ │ │ │ ├── reveal.min.css │ │ │ │ ├── search.css │ │ │ │ ├── search.js │ │ │ │ ├── search.min.css │ │ │ │ ├── search.min.js │ │ │ │ ├── segment.css │ │ │ │ ├── segment.min.css │ │ │ │ ├── shape.css │ │ │ │ ├── shape.js │ │ │ │ ├── shape.min.css │ │ │ │ ├── shape.min.js │ │ │ │ ├── sidebar.css │ │ │ │ ├── sidebar.js │ │ │ │ ├── sidebar.min.css │ │ │ │ ├── sidebar.min.js │ │ │ │ ├── site.css │ │ │ │ ├── site.js │ │ │ │ ├── site.min.css │ │ │ │ ├── site.min.js │ │ │ │ ├── state.js │ │ │ │ ├── state.min.js │ │ │ │ ├── statistic.css │ │ │ │ ├── statistic.min.css │ │ │ │ ├── step.css │ │ │ │ ├── step.min.css │ │ │ │ ├── sticky.css │ │ │ │ ├── sticky.js │ │ │ │ ├── sticky.min.css │ │ │ │ ├── sticky.min.js │ │ │ │ ├── tab.css │ │ │ │ ├── tab.js │ │ │ │ ├── tab.min.css │ │ │ │ ├── tab.min.js │ │ │ │ ├── table.css │ │ │ │ ├── table.min.css │ │ │ │ ├── transition.css │ │ │ │ ├── transition.js │ │ │ │ ├── transition.min.css │ │ │ │ ├── transition.min.js │ │ │ │ ├── visibility.js │ │ │ │ └── visibility.min.js │ │ │ ├── semantic.css │ │ │ ├── semantic.js │ │ │ ├── semantic.min.css │ │ │ ├── semantic.min.js │ │ │ └── themes │ │ │ │ ├── basic │ │ │ │ └── assets │ │ │ │ │ └── fonts │ │ │ │ │ ├── icons.eot │ │ │ │ │ ├── icons.svg │ │ │ │ │ ├── icons.ttf │ │ │ │ │ └── icons.woff │ │ │ │ ├── default │ │ │ │ └── assets │ │ │ │ │ ├── fonts │ │ │ │ │ ├── icons.eot │ │ │ │ │ ├── icons.svg │ │ │ │ │ ├── icons.ttf │ │ │ │ │ ├── icons.woff │ │ │ │ │ └── icons.woff2 │ │ │ │ │ └── images │ │ │ │ │ └── flags.png │ │ │ │ ├── github │ │ │ │ └── assets │ │ │ │ │ └── fonts │ │ │ │ │ ├── octicons-local.ttf │ │ │ │ │ ├── octicons.svg │ │ │ │ │ ├── octicons.ttf │ │ │ │ │ └── octicons.woff │ │ │ │ └── material │ │ │ │ └── assets │ │ │ │ └── fonts │ │ │ │ ├── icons.eot │ │ │ │ ├── icons.svg │ │ │ │ ├── icons.ttf │ │ │ │ └── icons.woff │ │ ├── setting.css │ │ ├── square.css │ │ ├── state_1.css │ │ ├── state_2.css │ │ ├── state_3.css │ │ ├── state_4.css │ │ ├── state_5.css │ │ └── sweetalert2.min.css │ ├── fonts │ │ ├── Futura.ttf │ │ └── Generica.otf │ ├── img │ │ ├── 403.png │ │ ├── 404-bg.png │ │ ├── 404-earth.png │ │ ├── 404-star-1.png │ │ ├── 404-star-2.png │ │ ├── 404-star-3.png │ │ ├── 404.png │ │ ├── 500.png │ │ ├── CDS-blue.png │ │ ├── CDS-green.png │ │ ├── CDS-orange.png │ │ ├── RBS-blue.png │ │ ├── RBS-green.png │ │ ├── RBS-orange.png │ │ ├── design_banner-1.1.jpg │ │ ├── detail_banner-1.1.jpg │ │ ├── fallingStar.png │ │ ├── favicon.png │ │ ├── help │ │ │ ├── detail.png │ │ │ ├── detail2.png │ │ │ ├── index.png │ │ │ ├── new-design-1.png │ │ │ ├── new-design-10.png │ │ │ ├── new-design-11.png │ │ │ ├── new-design-12.png │ │ │ ├── new-design-2.png │ │ │ ├── new-design-3.png │ │ │ ├── new-design-4.png │ │ │ ├── new-design-5.png │ │ │ ├── new-design-6.png │ │ │ ├── new-design-7.png │ │ │ ├── new-design-8.png │ │ │ ├── new-design-9.png │ │ │ ├── profile.png │ │ │ ├── searchbox.png │ │ │ ├── settings.png │ │ │ └── square.png │ │ ├── help_banner-1.1.jpg │ │ ├── icon │ │ │ ├── 0.jpg │ │ │ ├── 1.jpg │ │ │ ├── 10.jpg │ │ │ ├── 2.jpg │ │ │ ├── 3.jpg │ │ │ ├── 4.jpg │ │ │ ├── 5.jpg │ │ │ ├── 6.jpg │ │ │ ├── 7.jpg │ │ │ ├── 8.jpg │ │ │ ├── 9.jpg │ │ │ └── guest.jpg │ │ ├── login_bg.png │ │ ├── nothing.png │ │ ├── operator-blue.png │ │ ├── operator-green.png │ │ ├── operator-orange.png │ │ ├── pending.png │ │ ├── profile_banner-1.1.jpg │ │ ├── profile_banner.png │ │ ├── promoter-blue.png │ │ ├── promoter-green.png │ │ ├── promoter-orange.png │ │ ├── setting_banner1.1.jpg │ │ ├── square_banner1.1.jpg │ │ ├── teminator-blue.png │ │ ├── teminator-green.png │ │ ├── teminator-orange.png │ │ └── title_img.png │ ├── js │ │ ├── 404.js │ │ ├── Chart.bundle.min.js │ │ ├── Chart.min.js │ │ ├── angularplasmid.complete.min.js │ │ ├── base.js │ │ ├── detail.js │ │ ├── jquery-3.1.0.min.js │ │ ├── jquery.backstretch.min.js │ │ ├── jquery.md5.js │ │ ├── jquery.media.js │ │ ├── login.js │ │ ├── plax.js │ │ ├── prism.js │ │ ├── profile.js │ │ ├── range.js │ │ ├── setting.js │ │ ├── square.js │ │ ├── state_1.js │ │ ├── state_2.js │ │ ├── state_3.js │ │ ├── state_4.js │ │ ├── state_5.js │ │ └── sweetalert2.min.js │ ├── pdf │ │ ├── 10.pdf │ │ └── test.pdf │ ├── plupload │ │ ├── examples │ │ │ ├── custom.html │ │ │ ├── dump.php │ │ │ ├── events.html │ │ │ ├── jquery │ │ │ │ ├── all_runtimes.html │ │ │ │ ├── jquery_ui_widget.html │ │ │ │ ├── queue_widget.html │ │ │ │ └── s3.php │ │ │ └── upload.php │ │ ├── js │ │ │ ├── Moxie.swf │ │ │ ├── Moxie.xap │ │ │ ├── i18n │ │ │ │ ├── ar.js │ │ │ │ ├── az.js │ │ │ │ ├── bg.js │ │ │ │ ├── bs.js │ │ │ │ ├── ca.js │ │ │ │ ├── cs.js │ │ │ │ ├── cy.js │ │ │ │ ├── da.js │ │ │ │ ├── de.js │ │ │ │ ├── el.js │ │ │ │ ├── en.js │ │ │ │ ├── es.js │ │ │ │ ├── et.js │ │ │ │ ├── fa.js │ │ │ │ ├── fi.js │ │ │ │ ├── fr.js │ │ │ │ ├── he.js │ │ │ │ ├── hr.js │ │ │ │ ├── hu.js │ │ │ │ ├── hy.js │ │ │ │ ├── id.js │ │ │ │ ├── it.js │ │ │ │ ├── ja.js │ │ │ │ ├── ka.js │ │ │ │ ├── kk.js │ │ │ │ ├── km.js │ │ │ │ ├── ko.js │ │ │ │ ├── ku_IQ.js │ │ │ │ ├── lt.js │ │ │ │ ├── lv.js │ │ │ │ ├── ms.js │ │ │ │ ├── nl.js │ │ │ │ ├── pl.js │ │ │ │ ├── pt.js │ │ │ │ ├── pt_BR.js │ │ │ │ ├── ro.js │ │ │ │ ├── ru.js │ │ │ │ ├── sk.js │ │ │ │ ├── sl.js │ │ │ │ ├── sq.js │ │ │ │ ├── sr.js │ │ │ │ ├── sv.js │ │ │ │ ├── th_TH.js │ │ │ │ ├── tr.js │ │ │ │ ├── uk_UA.js │ │ │ │ ├── vi.js │ │ │ │ ├── zh_CN.js │ │ │ │ └── zh_TW.js │ │ │ ├── jquery.plupload.queue │ │ │ │ ├── css │ │ │ │ │ └── jquery.plupload.queue.css │ │ │ │ ├── img │ │ │ │ │ ├── backgrounds.gif │ │ │ │ │ ├── buttons-disabled.png │ │ │ │ │ ├── buttons.png │ │ │ │ │ ├── delete.gif │ │ │ │ │ ├── done.gif │ │ │ │ │ ├── error.gif │ │ │ │ │ ├── throbber.gif │ │ │ │ │ └── transp50.png │ │ │ │ ├── jquery.plupload.queue.js │ │ │ │ └── jquery.plupload.queue.min.js │ │ │ ├── jquery.ui.plupload │ │ │ │ ├── css │ │ │ │ │ └── jquery.ui.plupload.css │ │ │ │ ├── img │ │ │ │ │ ├── loading.gif │ │ │ │ │ └── plupload.png │ │ │ │ ├── jquery.ui.plupload.js │ │ │ │ └── jquery.ui.plupload.min.js │ │ │ ├── moxie.js │ │ │ ├── moxie.min.js │ │ │ ├── plupload.dev.js │ │ │ ├── plupload.full.min.js │ │ │ └── plupload.min.js │ │ ├── license.txt │ │ └── readme.md │ ├── protocol │ │ ├── Coculture │ │ │ └── 1.txt │ │ ├── Concentration measurement │ │ │ └── 1.txt │ │ ├── DNA Sequences │ │ │ └── 1.txt │ │ ├── Fluorescence measurement │ │ │ └── 1.txt │ │ ├── Plasmid construction │ │ │ └── 1.txt │ │ ├── Transfomation │ │ │ ├── 1.txt │ │ │ ├── m2.txt │ │ │ ├── m3.txt │ │ │ ├── m4.txt │ │ │ ├── m5.txt │ │ │ ├── m6.txt │ │ │ └── m7.txt │ │ └── protocol.txt │ └── upload │ │ ├── result_template.xls │ │ └── settings_template.xls └── templates │ ├── 403.html │ ├── 404.html │ ├── base.html │ ├── detail.html │ ├── help.html │ ├── login.html │ ├── profile.html │ ├── setting.html │ ├── square.html │ ├── state_1.html │ ├── state_2.html │ ├── state_3.html │ ├── state_4.html │ ├── state_5.html │ ├── testlogin.html │ ├── user.html │ └── wait.html ├── config.py ├── db_create.py ├── db_import_lists.py ├── get-pip.py ├── mar_total.txt ├── medium ├── Glucose&Ammonium phosphate, monobasic.txt └── sucrose&Ammonium phosphate, monobasic.txt ├── plasmid ├── pSB1AK3.txt ├── pSB1AT3.txt ├── pSB1C3.txt ├── pSB1K3.txt └── pSB1T3.txt ├── requirements.txt └── run.py /.gitignore: -------------------------------------------------------------------------------- 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