├── DESCRIPTION ├── NAMESPACE ├── R ├── clustering.R └── utilities.R ├── README.md ├── data └── counts.rda ├── man ├── counts.Rd ├── scSHC.Rd └── testClusters.Rd ├── scSHC.Rproj └── vignettes ├── demo.Rmd ├── demo.html ├── real_data.Rmd └── real_data.html /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/clustering.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/R/clustering.R -------------------------------------------------------------------------------- /R/utilities.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/R/utilities.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/README.md -------------------------------------------------------------------------------- /data/counts.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/data/counts.rda -------------------------------------------------------------------------------- /man/counts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/man/counts.Rd -------------------------------------------------------------------------------- /man/scSHC.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/man/scSHC.Rd -------------------------------------------------------------------------------- /man/testClusters.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/man/testClusters.Rd -------------------------------------------------------------------------------- /scSHC.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/scSHC.Rproj -------------------------------------------------------------------------------- /vignettes/demo.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/vignettes/demo.Rmd -------------------------------------------------------------------------------- /vignettes/demo.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/vignettes/demo.html -------------------------------------------------------------------------------- /vignettes/real_data.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/vignettes/real_data.Rmd -------------------------------------------------------------------------------- /vignettes/real_data.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/igrabski/sc-SHC/HEAD/vignettes/real_data.html --------------------------------------------------------------------------------