├── .github ├── PULL_REQUEST_TEMPLATE └── workflows │ ├── dispatch.yml │ ├── pr_validation.yml │ ├── publish_pypi.yml │ └── routine_check.yml ├── .gitignore ├── .readthedocs.yml ├── CHANGELOG.md ├── LICENCE ├── MANIFEST.in ├── README.md ├── docs ├── Makefile ├── environment.yml ├── requirements.txt └── source │ ├── _ext │ └── generate_contrib_docs.py │ ├── _static │ ├── contrib_edit1.png │ ├── contrib_fork.png │ ├── contrib_fork2.png │ ├── contrib_fork3.png │ ├── contrib_fork4.png │ ├── contrib_pr1.png │ ├── espresso_arch.svg │ ├── inlab_logo_60px.png │ └── style.css │ ├── _templates │ ├── autosummary │ │ ├── base.rst │ │ ├── class.rst │ │ ├── exception.rst │ │ ├── function.rst │ │ └── module.rst │ └── layout.html │ ├── conf.py │ ├── contributor_guide │ ├── faq.rst │ ├── github.rst │ ├── index.rst │ ├── new_contrib.rst │ ├── setup.rst │ └── submit.rst │ ├── developer_guide │ ├── ci.rst │ ├── deploy.rst │ ├── develop.rst │ ├── index.rst │ ├── licence.rst │ └── repository.rst │ ├── index.rst │ └── user_guide │ ├── api │ └── index.rst │ ├── changelog.md │ ├── contrib │ └── _index.rst │ ├── examples.rst │ ├── faq.rst │ ├── index.rst │ ├── installation.rst │ ├── usage.rst │ └── why.rst ├── envs ├── environment_dev.yml ├── requirements_dev.txt └── requirements_test.txt ├── espresso_machine ├── doc_utils │ ├── __init__.py │ ├── _sample_code.txt │ └── gen_docs.py └── new_contribution │ ├── _template │ ├── LICENCE │ ├── README.md │ ├── __init__.py │ ├── data │ │ └── testdata.txt │ └── example_name.py │ └── create_new_contrib.py ├── pyproject.toml ├── src └── espresso │ ├── __init__.py │ ├── _espresso_problem.py │ ├── capabilities.py │ ├── contrib │ ├── __init__.py │ ├── active_problems.txt │ ├── fmm_tomography │ │ ├── .gitignore │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── datasets │ │ │ ├── cbmod.txt │ │ │ ├── example1 │ │ │ │ ├── receivers_InLab_lrt_r36.dat │ │ │ │ ├── receivers_crossb_nwt_r10.dat │ │ │ │ ├── sources_InLab_lrt_s500.dat │ │ │ │ ├── sources_crossb_nwt_s10.dat │ │ │ │ ├── ttimes.dat │ │ │ │ ├── ttimes_InLab_lrt_s500_r36.dat │ │ │ │ ├── ttimes_crossb_nwt_s10_r10.dat │ │ │ │ └── ttimes_crossb_nwt_s10_r10_pyfm2d.dat │ │ │ ├── example2 │ │ │ │ ├── gridt_ex1.vtx │ │ │ │ ├── receivers_ex1.dat │ │ │ │ ├── sources_ex1.dat │ │ │ │ └── ttimes.dat │ │ │ └── example3 │ │ │ │ ├── gridi.vtx │ │ │ │ ├── gridt.vtx │ │ │ │ ├── gridt_ex2.vtx │ │ │ │ ├── receivers_ex2.dat │ │ │ │ ├── sources_ex2.dat │ │ │ │ └── ttimes.dat │ │ └── fmm_tomography.py │ ├── gravity_inversion │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ │ ├── __init__.py │ │ │ ├── gravmodel1.txt │ │ │ └── testdata.txt │ │ └── gravity_inversion.py │ ├── magnetotelluric_1D │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ │ ├── 16-A_KN2.dat │ │ │ └── __init__.py │ │ ├── examples │ │ │ ├── example_01.ipynb │ │ │ ├── example_01.py │ │ │ ├── field_MT.ipynb │ │ │ ├── field_MT.py │ │ │ ├── synthetic_AMT.ipynb │ │ │ └── synthetic_AMT.py │ │ └── magnetotelluric_1D.py │ ├── pumping_test │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ └── pumping_test.py │ ├── receiver_function_inversion_knt │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ │ ├── cps_rf_data │ │ │ │ ├── end.txt │ │ │ │ ├── rf_00_1.0_0.0658.txt │ │ │ │ ├── rf_00_1.0_0.0658_interpolated.txt │ │ │ │ ├── rf_01_1.0_0.0665.txt │ │ │ │ ├── rf_01_1.0_0.0665_interpolated.txt │ │ │ │ ├── rf_02_1.0_0.0687.txt │ │ │ │ ├── rf_02_1.0_0.0687_interpolated.txt │ │ │ │ ├── rf_03_1.0_0.0690.txt │ │ │ │ ├── rf_03_1.0_0.0690_interpolated.txt │ │ │ │ ├── rf_04_1.0_0.0698.txt │ │ │ │ ├── rf_04_1.0_0.0698_interpolated.txt │ │ │ │ ├── rf_05_1.0_0.0698.txt │ │ │ │ ├── rf_05_1.0_0.0698_interpolated.txt │ │ │ │ ├── rf_06_1.0_0.0700.txt │ │ │ │ ├── rf_06_1.0_0.0700_interpolated.txt │ │ │ │ ├── rf_07_1.0_0.0704.txt │ │ │ │ ├── rf_07_1.0_0.0704_interpolated.txt │ │ │ │ ├── rf_08_1.0_0.0705.txt │ │ │ │ ├── rf_08_1.0_0.0705_interpolated.txt │ │ │ │ ├── rf_09_1.0_0.0713.txt │ │ │ │ ├── rf_09_1.0_0.0713_interpolated.txt │ │ │ │ ├── rf_10_1.0_0.0716.txt │ │ │ │ ├── rf_10_1.0_0.0716_interpolated.txt │ │ │ │ ├── rf_11_1.0_0.0716.txt │ │ │ │ ├── rf_11_1.0_0.0716_interpolated.txt │ │ │ │ ├── rf_12_1.0_0.0724.txt │ │ │ │ ├── rf_12_1.0_0.0724_interpolated.txt │ │ │ │ ├── rf_13_1.0_0.0724.txt │ │ │ │ ├── rf_13_1.0_0.0724_interpolated.txt │ │ │ │ ├── rf_14_1.0_0.0732.txt │ │ │ │ ├── rf_14_1.0_0.0732_interpolated.txt │ │ │ │ ├── rf_15_1.0_0.0738.txt │ │ │ │ ├── rf_15_1.0_0.0738_interpolated.txt │ │ │ │ ├── rf_16_1.0_0.0739.txt │ │ │ │ ├── rf_16_1.0_0.0739_interpolated.txt │ │ │ │ ├── rf_17_1.0_0.0746.txt │ │ │ │ ├── rf_17_1.0_0.0746_interpolated.txt │ │ │ │ ├── rf_18_1.0_0.0746.txt │ │ │ │ ├── rf_18_1.0_0.0746_interpolated.txt │ │ │ │ ├── rf_19_1.0_0.0751.txt │ │ │ │ ├── rf_19_1.0_0.0751_interpolated.txt │ │ │ │ ├── rf_20_1.0_0.0760.txt │ │ │ │ ├── rf_20_1.0_0.0760_interpolated.txt │ │ │ │ ├── rf_21_1.0_0.0787.txt │ │ │ │ ├── rf_21_1.0_0.0787_interpolated.txt │ │ │ │ ├── rf_22_2.5_0.0658.txt │ │ │ │ ├── rf_22_2.5_0.0658_interpolated.txt │ │ │ │ ├── rf_23_2.5_0.0665.txt │ │ │ │ ├── rf_23_2.5_0.0665_interpolated.txt │ │ │ │ ├── rf_24_2.5_0.0687.txt │ │ │ │ ├── rf_24_2.5_0.0687_interpolated.txt │ │ │ │ ├── rf_25_2.5_0.0690.txt │ │ │ │ ├── rf_25_2.5_0.0690_interpolated.txt │ │ │ │ ├── rf_26_2.5_0.0698.txt │ │ │ │ ├── rf_26_2.5_0.0698_interpolated.txt │ │ │ │ ├── rf_27_2.5_0.0698.txt │ │ │ │ ├── rf_27_2.5_0.0698_interpolated.txt │ │ │ │ ├── rf_28_2.5_0.0700.txt │ │ │ │ ├── rf_28_2.5_0.0700_interpolated.txt │ │ │ │ ├── rf_29_2.5_0.0705.txt │ │ │ │ ├── rf_29_2.5_0.0705_interpolated.txt │ │ │ │ ├── rf_30_2.5_0.0713.txt │ │ │ │ ├── rf_30_2.5_0.0713_interpolated.txt │ │ │ │ ├── rf_31_2.5_0.0716.txt │ │ │ │ ├── rf_31_2.5_0.0716_interpolated.txt │ │ │ │ ├── rf_32_2.5_0.0724.txt │ │ │ │ ├── rf_32_2.5_0.0724_interpolated.txt │ │ │ │ ├── rf_33_2.5_0.0724.txt │ │ │ │ ├── rf_33_2.5_0.0724_interpolated.txt │ │ │ │ ├── rf_34_2.5_0.0738.txt │ │ │ │ ├── rf_34_2.5_0.0738_interpolated.txt │ │ │ │ ├── rf_35_2.5_0.0739.txt │ │ │ │ ├── rf_35_2.5_0.0739_interpolated.txt │ │ │ │ ├── rf_36_2.5_0.0746.txt │ │ │ │ ├── rf_36_2.5_0.0746_interpolated.txt │ │ │ │ ├── rf_37_2.5_0.0751.txt │ │ │ │ ├── rf_37_2.5_0.0751_interpolated.txt │ │ │ │ ├── rf_38_2.5_0.0760.txt │ │ │ │ ├── rf_38_2.5_0.0760_interpolated.txt │ │ │ │ └── start.txt │ │ │ ├── dataset1.txt │ │ │ ├── dataset2.txt │ │ │ ├── prep_data_1_2.py │ │ │ └── prep_data_3.py │ │ └── receiver_function_inversion_knt.py │ ├── receiver_function_inversion_shibutani │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ │ ├── dataset1.txt │ │ │ ├── dataset4.txt │ │ │ └── prep_data.py │ │ └── receiver_function_inversion_shibutani.py │ ├── simple_regression │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ └── simple_regression.py │ ├── slug_test │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ └── slug_test.py │ ├── surface_wave_tomography │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ │ ├── __init__.py │ │ │ ├── example1.pickle │ │ │ ├── example2.pickle │ │ │ └── example3.pickle │ │ └── surface_wave_tomography.py │ └── xray_tomography │ │ ├── LICENCE │ │ ├── README.md │ │ ├── __init__.py │ │ ├── data │ │ ├── __init__.py │ │ ├── csiro_logo.png │ │ ├── example1.dat │ │ ├── example2.dat │ │ ├── example3.dat │ │ └── inlab_logo.png │ │ └── xray_tomography.py │ ├── exceptions.py │ ├── utils │ ├── __init__.py │ ├── data_loader.py │ ├── file_handler.py │ └── report.py │ └── version.py └── test ├── _utils.py ├── check_requires.py ├── conftest.py ├── criteria.py ├── run_examples.py └── test_examples.py /.github/PULL_REQUEST_TEMPLATE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/inlab-geo/espresso/HEAD/.github/PULL_REQUEST_TEMPLATE 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