├── .Rbuildignore ├── .github ├── CODEOWNERS ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── ISSUE_TEMPLATE │ ├── bug.yml │ ├── config.yml │ ├── feature.yml │ └── question.yml ├── PULL_REQUEST_TEMPLATE.md └── workflows │ ├── audit.yaml │ ├── bioccheck.yaml │ ├── branch-cleanup.yaml │ ├── build-check-install.yaml │ ├── check.yaml.shared │ ├── cla.yaml │ ├── cran-status.yaml │ ├── docs.yaml.shared │ ├── gitleaks.yaml │ ├── grammar.yaml │ ├── licenses.yaml │ ├── links.yaml │ ├── linter.yaml │ ├── pkgdown.yaml │ ├── post-release.yaml.shared │ ├── release.yaml │ ├── release.yaml.shared │ ├── revdepcheck.yaml │ ├── rhub.yaml │ ├── roxygen.yaml │ ├── scheduled.yaml.shared │ ├── spelling.yaml │ ├── style.yaml │ ├── test-coverage.yaml │ ├── validation.yaml │ ├── verdepcheck.yaml │ ├── version-bump.yaml │ ├── version.yaml │ └── wasm.yaml ├── .gitignore ├── .lintr ├── .pre-commit-config.yaml ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── NEWS.md ├── R └── hello.R ├── README.md ├── SECURITY.md ├── _pkgdown.yml ├── images ├── audit.png ├── bioccheck.png ├── branch-cleanup.png ├── gitleaks.png ├── grammar1.png ├── grammar2.png ├── license-report.png ├── links.png ├── pkgdown.png ├── presidio.png ├── r-cmd-check.png ├── release.png ├── rhub-workflow.png ├── roxygen.png ├── spellcheck.png ├── styler.png ├── superlinter.png ├── validation1.png ├── validation2.png ├── version-bump.png └── version.png ├── init.sh ├── inst ├── WORDLIST └── plumber │ └── hello │ └── plumber.R ├── man ├── hello.Rd ├── plumber_api.Rd └── shiny_app.Rd ├── r.pkg.template.Rproj ├── staged_dependencies.yaml ├── tests ├── testthat.R └── testthat │ ├── shiny-app │ └── app.R │ ├── test-api.R │ ├── test-hello.R │ └── test-shiny.R ├── vignettes └── hello.Rmd └── workflows.md /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/CODEOWNERS: -------------------------------------------------------------------------------- 1 | * @insightsengineering/idr 2 | -------------------------------------------------------------------------------- /.github/CODE_OF_CONDUCT.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/CODE_OF_CONDUCT.md -------------------------------------------------------------------------------- /.github/CONTRIBUTING.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/CONTRIBUTING.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/bug.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/ISSUE_TEMPLATE/bug.yml -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/config.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/ISSUE_TEMPLATE/config.yml -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/feature.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/ISSUE_TEMPLATE/feature.yml -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/question.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/ISSUE_TEMPLATE/question.yml -------------------------------------------------------------------------------- /.github/PULL_REQUEST_TEMPLATE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/PULL_REQUEST_TEMPLATE.md -------------------------------------------------------------------------------- /.github/workflows/audit.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/audit.yaml -------------------------------------------------------------------------------- /.github/workflows/bioccheck.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/bioccheck.yaml -------------------------------------------------------------------------------- /.github/workflows/branch-cleanup.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/branch-cleanup.yaml -------------------------------------------------------------------------------- /.github/workflows/build-check-install.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/build-check-install.yaml -------------------------------------------------------------------------------- /.github/workflows/check.yaml.shared: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/check.yaml.shared -------------------------------------------------------------------------------- /.github/workflows/cla.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/cla.yaml -------------------------------------------------------------------------------- /.github/workflows/cran-status.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/cran-status.yaml -------------------------------------------------------------------------------- /.github/workflows/docs.yaml.shared: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/docs.yaml.shared -------------------------------------------------------------------------------- /.github/workflows/gitleaks.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/gitleaks.yaml -------------------------------------------------------------------------------- /.github/workflows/grammar.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/grammar.yaml -------------------------------------------------------------------------------- /.github/workflows/licenses.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/licenses.yaml -------------------------------------------------------------------------------- /.github/workflows/links.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/links.yaml -------------------------------------------------------------------------------- /.github/workflows/linter.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/linter.yaml -------------------------------------------------------------------------------- /.github/workflows/pkgdown.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/pkgdown.yaml -------------------------------------------------------------------------------- /.github/workflows/post-release.yaml.shared: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/post-release.yaml.shared -------------------------------------------------------------------------------- /.github/workflows/release.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/release.yaml -------------------------------------------------------------------------------- /.github/workflows/release.yaml.shared: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/release.yaml.shared -------------------------------------------------------------------------------- /.github/workflows/revdepcheck.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/revdepcheck.yaml -------------------------------------------------------------------------------- /.github/workflows/rhub.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/rhub.yaml -------------------------------------------------------------------------------- /.github/workflows/roxygen.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/roxygen.yaml -------------------------------------------------------------------------------- /.github/workflows/scheduled.yaml.shared: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/scheduled.yaml.shared -------------------------------------------------------------------------------- /.github/workflows/spelling.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/spelling.yaml -------------------------------------------------------------------------------- /.github/workflows/style.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/style.yaml -------------------------------------------------------------------------------- /.github/workflows/test-coverage.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/test-coverage.yaml -------------------------------------------------------------------------------- /.github/workflows/validation.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/validation.yaml -------------------------------------------------------------------------------- /.github/workflows/verdepcheck.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/verdepcheck.yaml -------------------------------------------------------------------------------- /.github/workflows/version-bump.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/version-bump.yaml -------------------------------------------------------------------------------- /.github/workflows/version.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/version.yaml -------------------------------------------------------------------------------- /.github/workflows/wasm.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.github/workflows/wasm.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.gitignore -------------------------------------------------------------------------------- /.lintr: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.lintr -------------------------------------------------------------------------------- /.pre-commit-config.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/.pre-commit-config.yaml -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/LICENSE -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/NEWS.md -------------------------------------------------------------------------------- /R/hello.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/R/hello.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/README.md -------------------------------------------------------------------------------- /SECURITY.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/SECURITY.md -------------------------------------------------------------------------------- /_pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/_pkgdown.yml -------------------------------------------------------------------------------- /images/audit.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/audit.png -------------------------------------------------------------------------------- /images/bioccheck.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/bioccheck.png -------------------------------------------------------------------------------- /images/branch-cleanup.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/branch-cleanup.png -------------------------------------------------------------------------------- /images/gitleaks.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/gitleaks.png -------------------------------------------------------------------------------- /images/grammar1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/grammar1.png -------------------------------------------------------------------------------- /images/grammar2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/grammar2.png -------------------------------------------------------------------------------- /images/license-report.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/license-report.png -------------------------------------------------------------------------------- /images/links.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/links.png -------------------------------------------------------------------------------- /images/pkgdown.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/pkgdown.png -------------------------------------------------------------------------------- /images/presidio.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/presidio.png -------------------------------------------------------------------------------- /images/r-cmd-check.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/r-cmd-check.png -------------------------------------------------------------------------------- /images/release.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/release.png -------------------------------------------------------------------------------- /images/rhub-workflow.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/rhub-workflow.png -------------------------------------------------------------------------------- /images/roxygen.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/roxygen.png -------------------------------------------------------------------------------- /images/spellcheck.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/spellcheck.png -------------------------------------------------------------------------------- /images/styler.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/styler.png -------------------------------------------------------------------------------- /images/superlinter.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/superlinter.png -------------------------------------------------------------------------------- /images/validation1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/validation1.png -------------------------------------------------------------------------------- /images/validation2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/validation2.png -------------------------------------------------------------------------------- /images/version-bump.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/version-bump.png -------------------------------------------------------------------------------- /images/version.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/images/version.png -------------------------------------------------------------------------------- /init.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/init.sh -------------------------------------------------------------------------------- /inst/WORDLIST: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/inst/WORDLIST -------------------------------------------------------------------------------- /inst/plumber/hello/plumber.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/inst/plumber/hello/plumber.R -------------------------------------------------------------------------------- /man/hello.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/man/hello.Rd -------------------------------------------------------------------------------- /man/plumber_api.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/man/plumber_api.Rd -------------------------------------------------------------------------------- /man/shiny_app.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/man/shiny_app.Rd -------------------------------------------------------------------------------- /r.pkg.template.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/r.pkg.template.Rproj -------------------------------------------------------------------------------- /staged_dependencies.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/staged_dependencies.yaml -------------------------------------------------------------------------------- /tests/testthat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/tests/testthat.R -------------------------------------------------------------------------------- /tests/testthat/shiny-app/app.R: -------------------------------------------------------------------------------- 1 | r.pkg.template::shiny_app() 2 | -------------------------------------------------------------------------------- /tests/testthat/test-api.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/tests/testthat/test-api.R -------------------------------------------------------------------------------- /tests/testthat/test-hello.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/tests/testthat/test-hello.R -------------------------------------------------------------------------------- /tests/testthat/test-shiny.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/tests/testthat/test-shiny.R -------------------------------------------------------------------------------- /vignettes/hello.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/vignettes/hello.Rmd -------------------------------------------------------------------------------- /workflows.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/insightsengineering/r.pkg.template/HEAD/workflows.md --------------------------------------------------------------------------------