├── .gitignore ├── LICENSE ├── README.md ├── code-of-conduct.md ├── contributing.md └── docs ├── .nojekyll ├── CNAME ├── _sidebar.md ├── assets └── images │ ├── favicon.ico │ ├── md.png │ └── md_small.png ├── index.html └── md-engines ├── awesome-gromacs.md ├── awesome-lammps.md ├── awesome-openmm.md └── awesome-tinker.md /.gitignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 | -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/README.md -------------------------------------------------------------------------------- /code-of-conduct.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/code-of-conduct.md -------------------------------------------------------------------------------- /contributing.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/contributing.md -------------------------------------------------------------------------------- /docs/.nojekyll: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /docs/CNAME: -------------------------------------------------------------------------------- 1 | awesome-md.com -------------------------------------------------------------------------------- /docs/_sidebar.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/_sidebar.md -------------------------------------------------------------------------------- /docs/assets/images/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/assets/images/favicon.ico -------------------------------------------------------------------------------- /docs/assets/images/md.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/assets/images/md.png -------------------------------------------------------------------------------- /docs/assets/images/md_small.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/assets/images/md_small.png -------------------------------------------------------------------------------- /docs/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/index.html -------------------------------------------------------------------------------- /docs/md-engines/awesome-gromacs.md: -------------------------------------------------------------------------------- 1 | # Awesome Gromacs -------------------------------------------------------------------------------- /docs/md-engines/awesome-lammps.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ipudu/awesome-molecular-dynamics/HEAD/docs/md-engines/awesome-lammps.md -------------------------------------------------------------------------------- /docs/md-engines/awesome-openmm.md: -------------------------------------------------------------------------------- 1 | # Awesome OpenMM -------------------------------------------------------------------------------- /docs/md-engines/awesome-tinker.md: -------------------------------------------------------------------------------- 1 | # Awesome Tinker --------------------------------------------------------------------------------