├── .gitattributes ├── .gitignore ├── .travis.yml ├── LICENSE ├── MANIFEST.in ├── README.rst ├── constclust ├── __init__.py ├── _version.py ├── aggregate.py ├── cluster.py ├── clustree.py ├── paramspace.py ├── permute.py ├── plotting.py └── utils.py ├── data └── cellbench10x.h5ad ├── docs ├── Makefile ├── _static │ └── img │ │ └── repo_fig.png └── source │ ├── _templates │ └── autosummary │ │ └── class.rst │ ├── api.rst │ ├── conf.py │ ├── index.rst │ ├── installation.rst │ └── tutorials.rst ├── notebooks ├── demo01.ipynb ├── interface.ipynb └── simulated.ipynb ├── requirements.txt ├── scripts ├── cluster.py ├── crossval.py └── downsample_groups.py ├── setup.cfg ├── setup.py ├── tests ├── __init__.py ├── test_aggregate.py ├── test_cluster.py ├── test_componentlist.py └── test_neighbors.py └── versioneer.py /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ivirshup/constclust/HEAD/.gitattributes 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