├── .gitignore ├── ito ├── CAR_bug.txt ├── CAR_ssm_bug.txt ├── N.bug.txt ├── Qglauca.csv ├── exampe_code2_stan.R ├── exampe_code_stan.R ├── example_code.R ├── nenrin.data ├── nenrin1.bug.txt ├── nenrin1.stan ├── nenrin2.bug.txt ├── nenrin2.stan └── nenrin3.bug.txt ├── kubo ├── jags1 │ ├── Makefile │ ├── model.bug │ ├── model.bug.txt │ ├── pg.txt │ ├── rcode1.R │ ├── rcode2.R │ └── runjags.R └── jags2 │ ├── Makefile │ ├── model.bug │ ├── model.bug.txt │ ├── pg.txt │ └── runjags.R ├── matsuura ├── example1 │ ├── example1.ipynb │ ├── model1.stan │ ├── model2-updated.stan │ ├── model2.stan │ ├── output │ │ └── fig1.png │ ├── runstan1.R │ ├── runstan1b-post1.R │ ├── runstan1b-post2.R │ ├── runstan1b.R │ ├── runstan2-post-fig1.R │ └── runstan2.R ├── example2 │ ├── example2.ipynb │ ├── input │ │ └── data-season.txt │ ├── model-updated.stan │ ├── model.stan │ ├── output │ │ ├── fig2-bottom-left.png │ │ ├── fig2-bottom-right.png │ │ ├── fig2-top-left.png │ │ └── fig2-top-right.png │ ├── runstan-post-decision.R │ ├── runstan-post-fig2.R │ └── runstan.R └── example3 │ ├── example3.ipynb │ ├── fig3.R │ ├── input │ ├── data-plate-design.txt │ └── data-plate.txt │ ├── model-updated.stan │ ├── model.stan │ ├── output │ ├── fig3.png │ ├── fig4-left.png │ └── fig4-right.png │ ├── runstan-post-fig4.R │ └── runstan.R └── watanabe ├── code1.py ├── code2.py ├── code3.py ├── code4.py └── code_pymc2.py /.gitignore: -------------------------------------------------------------------------------- 1 | *.RData -------------------------------------------------------------------------------- /ito/CAR_bug.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/iwanami-datascience/vol1/HEAD/ito/CAR_bug.txt -------------------------------------------------------------------------------- /ito/CAR_ssm_bug.txt: -------------------------------------------------------------------------------- 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