├── 01_installingoccupancypackages.R ├── 02_singleseasonoccupancy.R ├── 03_singleseasonoccupancy_part2_modelcomparison.R ├── 04_dynamicoccupancy.R ├── 05_implicitdynamicsoccupancy.R ├── 06_multispeciesoccupancy.R ├── 07_multispeciesoccupancycovariates.R ├── 08_msomundetectedspecies.R ├── README.md ├── community_detection_3visits.csv ├── community_detection_history.RData ├── community_detection_history_covariates.RData ├── detection_history.csv ├── dynamic_detection_history.csv ├── dynamic_effort.csv ├── dynamic_site_cov.csv ├── effort.csv ├── observers.csv └── site_cov.csv /01_installingoccupancypackages.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jamesepaterson/occupancyworkshop/HEAD/01_installingoccupancypackages.R -------------------------------------------------------------------------------- /02_singleseasonoccupancy.R: -------------------------------------------------------------------------------- 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