├── .github └── ISSUE_TEMPLATE │ ├── bug-report.md │ ├── documentation.md │ └── feature-request.md ├── .gitignore ├── .readthedocs.yml ├── .travis.yml ├── Dockerfile ├── LICENSE ├── README.md ├── Singularity ├── create_env.sh ├── docs ├── Makefile ├── make.bat ├── requirements.txt └── source │ ├── conf.py │ ├── exec.rst │ ├── index.rst │ ├── learn.rst │ ├── models.rst │ ├── plot.rst │ └── util.rst ├── setup.py ├── synthtorch ├── __init__.py ├── errors.py ├── exec │ ├── __init__.py │ ├── exec.py │ ├── nn_predict.py │ └── nn_train.py ├── learn │ ├── __init__.py │ ├── layers.py │ ├── learner.py │ ├── loss.py │ ├── optim.py │ └── predict.py ├── models │ ├── __init__.py │ ├── densenet.py │ ├── nconvnet.py │ ├── unet.py │ └── vae.py ├── plot │ ├── __init__.py │ └── loss.py └── util │ ├── __init__.py │ ├── config.py │ └── helper.py ├── tests ├── __init__.py ├── _test_funcs.py ├── test_alt.py ├── test_annom.py ├── test_data │ ├── color │ │ └── test.png │ ├── csv │ │ └── test.csv │ ├── masks │ │ └── mask.nii.gz │ ├── nii │ │ └── test.nii.gz │ ├── png │ │ └── test.png │ └── tif │ │ └── test.tif ├── test_exec.py └── test_plot.py └── tutorials ├── 5min_tutorial.md └── tutorial.ipynb /.github/ISSUE_TEMPLATE/bug-report.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jcreinhold/synthtorch/HEAD/.github/ISSUE_TEMPLATE/bug-report.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/documentation.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jcreinhold/synthtorch/HEAD/.github/ISSUE_TEMPLATE/documentation.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/feature-request.md: -------------------------------------------------------------------------------- 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