├── .gitignore ├── Ours ├── ASPP.py ├── Base_transformer.py ├── __init__.py ├── __pycache__ │ ├── ASPP.cpython-37.pyc │ ├── Base_transformer.cpython-37.pyc │ ├── __init__.cpython-37.pyc │ ├── base.cpython-37.pyc │ ├── cell_DETR.cpython-37.pyc │ └── resnet.cpython-37.pyc ├── base.py ├── cell_DETR.py ├── non_local.py └── resnet.py ├── README.md ├── dataset ├── __init__.py ├── __pycache__ │ ├── __init__.cpython-37.pyc │ ├── isbi2016.cpython-37.pyc │ └── isic2016.cpython-37.pyc ├── isic2016.py └── isic2018.py ├── framework.jpg ├── infer.py ├── lib ├── Cell_DETR_master │ ├── .gitignore │ ├── DETR_Test.py │ ├── DeepDetr.py │ ├── LICENSE │ ├── __pycache__ │ │ ├── backbone.cpython-37.pyc │ │ ├── bounding_box_head.cpython-37.pyc │ │ ├── detr_new.cpython-37.pyc │ │ ├── segmentation.cpython-37.pyc │ │ └── transformer.cpython-37.pyc │ ├── augmentation.py │ ├── backbone.py │ ├── botr.py │ ├── botr2.py │ ├── bounding_box_head.py │ ├── ccccode.py │ ├── dataset.py │ ├── dcn2 │ │ ├── .gitignore │ │ ├── LICENSE │ │ ├── README.md │ │ ├── build.py │ │ ├── build_modulated.py │ │ ├── functions │ │ │ ├── __init__.py │ │ │ ├── deform_conv.py │ │ │ └── modulated_dcn_func.py │ │ ├── modules │ │ │ ├── __init__.py │ │ │ ├── deform_conv.py │ │ │ └── modulated_dcn.py │ │ ├── src │ │ │ ├── cuda │ │ │ │ ├── deform_psroi_pooling_cuda.cu │ │ │ │ ├── deform_psroi_pooling_cuda.h │ │ │ │ ├── modulated_deform_im2col_cuda.cu │ │ │ │ └── modulated_deform_im2col_cuda.h │ │ │ ├── deform_conv.c │ │ │ ├── deform_conv.h │ │ │ ├── deform_conv_cuda.c │ │ │ ├── deform_conv_cuda.h │ │ │ ├── deform_conv_cuda_kernel.cu │ │ │ ├── deform_conv_cuda_kernel.h │ │ │ ├── modulated_dcn.c │ │ │ ├── modulated_dcn.h │ │ │ ├── modulated_dcn_cuda.c │ │ │ └── modulated_dcn_cuda.h │ │ ├── test.py │ │ └── test_modulated.py │ ├── detr.py │ ├── detr_new.py │ ├── images │ │ └── CELL_DETR.PNG │ ├── lossfunction.py │ ├── main.py │ ├── matcher.py │ ├── misc.py │ ├── model_wrapper.py │ ├── pade_activation_unit │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-37.pyc │ │ │ └── utils.cpython-37.pyc │ │ ├── cuda │ │ │ ├── pau_cuda.cpp │ │ │ ├── pau_cuda_kernels.cu │ │ │ ├── python_imp │ │ │ │ ├── Pade.py │ │ │ │ └── __init__.py │ │ │ └── setup.py │ │ ├── torchsummary.py │ │ └── utils.py │ ├── pixel_adaptive_convolution │ │ ├── README.md │ │ ├── __pycache__ │ │ │ └── pac.cpython-37.pyc │ │ ├── pac.py │ │ ├── paccrf.py │ │ ├── requirements.txt │ │ ├── test_pac.py │ │ └── tools │ │ │ ├── flowlib.py │ │ │ └── plot_log.py │ ├── requirements.txt │ ├── segmentation.py │ ├── sgtr.py │ ├── transformer.py │ └── validation_metric.py └── non_local │ ├── non_local_concatenation.py │ ├── non_local_dot_product.py │ ├── non_local_embedded_gaussian.py │ └── non_local_gaussian.py ├── src ├── BAT_Modules.py ├── __pycache__ │ ├── BAT_Modules.cpython-37.pyc │ ├── losses.cpython-37.pyc │ ├── transformer.cpython-37.pyc │ └── utils.cpython-37.pyc ├── losses.py ├── process_point.py ├── process_resize.py ├── transformer.py └── 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