├── .gitignore ├── BINARY_README ├── CMakeLists.txt ├── Doxyfile ├── Doxyfile_internal ├── README.md ├── TUTORIALS.md ├── apps ├── CMakeLists.txt ├── cascades │ ├── CMakeLists.txt │ └── cascades.cpp ├── concomp │ ├── CMakeLists.txt │ └── concomp.cpp ├── example │ ├── CMakeLists.txt │ └── hello_world.cpp └── label_propagation │ ├── CMakeLists.txt │ └── label_propagation.cpp ├── cmake ├── FindAnt.cmake ├── FindBoost.cmake ├── FindCUDA.cmake ├── FindCUDA │ ├── make2cmake.cmake │ ├── parse_cubin.cmake │ └── run_nvcc.cmake ├── FindLibJpeg.cmake ├── FindMPICH2.cmake ├── FindMatlab.cmake ├── FindPerftools.cmake ├── Mex_stub.cpp └── mex_link.sh ├── configure ├── cxxtest ├── cxxtest │ ├── Descriptions.cpp │ ├── Descriptions.h │ ├── DummyDescriptions.cpp │ ├── DummyDescriptions.h │ ├── ErrorFormatter.h │ ├── ErrorPrinter.h │ ├── Flags.h │ ├── GlobalFixture.cpp │ ├── GlobalFixture.h │ ├── Gui.h │ ├── LinkedList.cpp │ ├── LinkedList.h │ ├── Mock.h │ ├── ParenPrinter.h │ ├── QtGui.h │ ├── RealDescriptions.cpp │ ├── RealDescriptions.h │ ├── Root.cpp │ ├── SelfTest.h │ ├── StdHeaders.h │ ├── StdTestSuite.h │ ├── StdValueTraits.h │ ├── StdioFilePrinter.h │ ├── StdioPrinter.h │ ├── TeeListener.h │ ├── TestListener.h │ ├── TestMain.h │ ├── TestRunner.h │ ├── TestSuite.cpp │ ├── TestSuite.h │ ├── TestTracker.cpp │ ├── TestTracker.h │ ├── ValueTraits.cpp │ ├── ValueTraits.h │ ├── Win32Gui.h │ ├── X11Gui.h │ ├── XUnitPrinter.h │ ├── XmlFormatter.h │ ├── XmlPrinter.h │ ├── YesNoRunner.h │ ├── __init__.py │ ├── __release__.py │ ├── cxx_parser.py │ ├── cxxtest_fog.py │ ├── cxxtest_misc.py │ ├── cxxtest_parser.py │ └── cxxtestgen.py ├── cxxtestgen └── python │ ├── README.txt │ ├── convert.py │ ├── cxxtest │ ├── __init__.py │ ├── __release__.py │ ├── cxx_parser.py │ ├── cxxtest_fog.py │ ├── cxxtest_misc.py │ ├── cxxtest_parser.py │ └── cxxtestgen.py │ ├── python3 │ ├── cxxtest │ │ ├── __init__.py │ │ ├── __release__.py │ │ ├── cxx_parser.py │ │ ├── cxxtest_fog.py │ │ ├── cxxtest_misc.py │ │ ├── cxxtest_parser.py │ │ └── cxxtestgen.py │ └── scripts │ │ └── cxxtestgen │ ├── scripts │ └── cxxtestgen │ └── setup.py ├── demoapps ├── CMakeLists.txt ├── dsl │ ├── CMakeLists.txt │ ├── gen_impl.cpp │ ├── gl_server.cpp │ ├── graph_typedefs.gen │ ├── impl.graphlab │ └── scala_impl │ │ └── dsl.scala ├── pagerank │ ├── CMakeLists.txt │ ├── simple_pagerank.cpp │ ├── warp_engine_pagerank.cpp │ └── warp_parfor_pagerank.cpp └── rpc │ ├── CMakeLists.txt │ ├── dht_performance_test.cpp │ ├── fiber_future_test.cpp │ ├── obj_fiber_future_test.cpp │ ├── rpc_call_perf_test.cpp │ ├── rpc_example1.cpp │ ├── rpc_example2.cpp │ ├── rpc_example3.cpp │ ├── rpc_example4.cpp │ ├── rpc_example5.cpp │ ├── rpc_example6.cpp │ ├── rpc_example7.cpp │ ├── rpc_example8.cpp │ └── rpc_example9.cpp ├── dist └── README ├── doc ├── README └── images │ ├── cycle_triangle.dot │ ├── cycle_triangle.gif │ ├── example_webgraph.dot │ ├── example_webgraph.gif │ ├── factor_graph_to_distributed_graph.png │ ├── factor_graph_to_distributed_graph.svg │ ├── graph_format_example.dot │ ├── graph_format_example.gif │ ├── images.pptx │ ├── in_triangle.dot │ ├── in_triangle.gif │ ├── noisy_img.jpeg │ ├── orig_img.jpeg │ ├── out_triangle.dot │ ├── out_triangle.gif │ ├── partition_fig.gif │ ├── potts_model.png │ ├── pred_img.jpeg │ ├── software_stack.png │ ├── system_overview.png │ ├── through_triangle.dot │ ├── through_triangle.gif │ ├── triangle_strong_community.png │ └── triangle_weak_community.png ├── images ├── 800px-PageRank-hi-res-300x215.png ├── Slide1.jpg ├── als_eqn.gif ├── cloudcv-1024x489.png ├── collaborative_filtering.jpg ├── gl_os_software_stack.png ├── kcore2-300x300.jpg ├── kmeans1.gif ├── panorama-1024x251.png ├── r-300x278.jpg ├── topic-300x179.gif ├── triangle_strong_community-150x150.jpg └── triangle_weak_community-150x150.jpg ├── license ├── LICENSE.txt ├── LICENSE_prepend.txt ├── corporate_CLA.txt └── individual_CLA.txt ├── matlab └── eventlog_parser.m ├── patches ├── boost.patch ├── libbz2_fpic.patch ├── libevent_clean_and_remap.sh ├── libevent_remap_file.txt ├── libhdfs.patch ├── libjson.patch ├── opencv_apple_rpath.patch ├── tcmalloc.patch └── zookeeper │ ├── Makefile │ └── configure ├── scripts ├── add_line_to_eof.sh ├── binary_list.txt ├── build_linux_static.sh ├── build_linux_static_no_jvm.sh ├── build_linux_static_no_jvm_no_mpi.sh ├── build_osx_static.sh ├── compile_static_release.sh ├── ec2 │ ├── benchmark_ec2.sh │ ├── gl-ec2 │ ├── gl_ec2.py │ ├── readme │ └── third_party │ │ └── boto-2.4.1.zip ├── ec2_tools │ ├── scatter │ ├── setup-hadoop │ └── setup-torque ├── install_graphlab.sh ├── license_prepend.sh ├── linux_run_script_no_jvm_template.sh ├── linux_run_script_template.sh ├── make_all_docs.sh ├── make_dist.sh ├── mpi_redirect_stdout.sh ├── mpirsync ├── rpcexec.py └── test_dist.sh ├── src ├── CMakeLists.txt ├── graphlab.hpp └── graphlab │ ├── CMakeLists.txt │ ├── aggregation │ ├── CMakeLists.txt │ ├── aggregation_includes.hpp │ └── distributed_aggregator.hpp │ ├── docs │ ├── faq.dox │ ├── overview.dox │ ├── using.dox │ └── using_warp.dox │ ├── engine │ ├── CMakeLists.txt │ ├── async_consistent_engine.hpp │ ├── distributed_chandy_misra.hpp │ ├── engine_includes.hpp │ ├── execution_status.hpp │ ├── iengine.hpp │ ├── message_array.hpp │ ├── omni_engine.hpp │ ├── synchronous_engine.hpp │ ├── warp_engine.hpp │ ├── warp_graph_broadcast.hpp │ ├── warp_graph_mapreduce.hpp │ ├── warp_graph_transform.hpp │ └── warp_parfor_all_vertices.hpp │ ├── graph │ ├── CMakeLists.txt │ ├── builtin_parsers.hpp │ ├── distributed_graph.hpp │ ├── dynamic_local_graph.hpp │ ├── graph_basic_types.hpp │ ├── graph_formats.dox │ ├── graph_gather_apply.hpp │ ├── graph_hash.hpp │ ├── graph_includes.hpp │ ├── graph_ops.hpp │ ├── graph_storage_deprecated.hpp │ ├── graph_vertex_join.hpp │ ├── ingress │ │ ├── distributed_batch_ingress.hpp │ │ ├── distributed_constrained_batch_ingress.hpp │ │ ├── distributed_constrained_oblivious_ingress.hpp │ │ ├── distributed_constrained_random_ingress.hpp │ │ ├── distributed_hdrf_ingress.hpp │ │ ├── distributed_identity_ingress.hpp │ │ ├── distributed_ingress_base.hpp │ │ ├── distributed_oblivious_ingress.hpp │ │ ├── distributed_random_ingress.hpp │ │ ├── ingress_edge_decision.hpp │ │ └── sharding_constraint.hpp │ ├── local_edge_buffer.hpp │ ├── local_graph.hpp │ ├── local_graph_ops.hpp │ └── vertex_set.hpp │ ├── jni │ ├── CMakeLists.txt │ ├── java_any.cpp │ ├── java_any.hpp │ ├── org_graphlab_Aggregator.cpp │ ├── org_graphlab_Aggregator.h │ ├── org_graphlab_Aggregator.hpp │ ├── org_graphlab_Context.cpp │ ├── org_graphlab_Context.h │ ├── org_graphlab_Context.hpp │ ├── org_graphlab_Core.cpp │ ├── org_graphlab_Core.h │ ├── org_graphlab_Core.hpp │ ├── org_graphlab_Updater.cpp │ ├── org_graphlab_Updater.h │ └── org_graphlab_Updater.hpp │ ├── logger │ ├── CMakeLists.txt │ ├── assertions.hpp │ ├── assertions.hpp.orig │ ├── backtrace.cpp │ ├── backtrace.hpp │ ├── fail_method.hpp │ ├── logger.cpp │ ├── logger.hpp │ └── logger_includes.hpp │ ├── macros_def.hpp │ ├── macros_undef.hpp │ ├── options │ ├── CMakeLists.txt │ ├── command_line_options.cpp │ ├── command_line_options.hpp │ ├── engine_help.txt │ ├── graph_help.txt │ ├── graphlab_options.hpp │ ├── options_includes.hpp │ ├── options_map.cpp │ └── options_map.hpp │ ├── parallel │ ├── CMakeLists.txt │ ├── atomic.hpp │ ├── atomic_add_vector2_empty_specialization.hpp │ ├── atomic_ops.hpp │ ├── cache_line_pad.hpp │ ├── deferred_rwlock.hpp │ ├── fiber_barrier.hpp │ ├── fiber_conditional.hpp │ ├── fiber_control.cpp │ ├── fiber_control.hpp │ ├── fiber_group.cpp │ ├── fiber_group.hpp │ ├── fiber_remote_request.hpp │ ├── lockfree_push_back.hpp │ ├── mutex.hpp │ ├── parallel_includes.hpp │ ├── pthread_tools.cpp │ ├── pthread_tools.hpp │ ├── queued_rwlock.hpp │ ├── thread_pool.cpp │ └── thread_pool.hpp │ ├── rpc │ ├── CMakeLists.txt │ ├── async_consensus.cpp │ ├── async_consensus.hpp │ ├── buffered_exchange.hpp │ ├── caching_dht.hpp │ ├── circular_char_buffer.cpp │ ├── circular_char_buffer.hpp │ ├── circular_iovec_buffer.hpp │ ├── dc.cpp │ ├── dc.hpp │ ├── dc_buffered_stream_send2.cpp │ ├── dc_buffered_stream_send2.hpp │ ├── dc_comm_base.hpp │ ├── dc_compile_parameters.hpp │ ├── dc_dist_object.hpp │ ├── dc_dist_object_base.hpp │ ├── dc_init_from_env.cpp │ ├── dc_init_from_env.hpp │ ├── dc_init_from_mpi.cpp │ ├── dc_init_from_mpi.hpp │ ├── dc_init_from_zookeeper.cpp │ ├── dc_init_from_zookeeper.hpp │ ├── dc_internal_types.hpp │ ├── dc_packet_mask.hpp │ ├── dc_receive.hpp │ ├── dc_send.hpp │ ├── dc_services.hpp │ ├── dc_stream_receive.cpp │ ├── dc_stream_receive.hpp │ ├── dc_tcp_comm.cpp │ ├── dc_tcp_comm.hpp │ ├── dc_thread_get_send_buffer.hpp │ ├── dc_types.hpp │ ├── delta_dht.cpp │ ├── delta_dht.hpp │ ├── dht.hpp │ ├── distributed_event_log.cpp │ ├── distributed_event_log.hpp │ ├── evwrapdef.h │ ├── evwrapundef.h │ ├── fiber_async_consensus.cpp │ ├── fiber_async_consensus.hpp │ ├── fiber_buffered_exchange.hpp │ ├── function_arg_types_def.hpp │ ├── function_arg_types_undef.hpp │ ├── function_broadcast_issue.hpp │ ├── function_call_dispatch.hpp │ ├── function_call_issue.hpp │ ├── function_ret_type.hpp │ ├── get_current_process_hash.cpp │ ├── get_current_process_hash.hpp │ ├── is_rpc_call.hpp │ ├── lazy_dht.hpp │ ├── mem_function_arg_types_def.hpp │ ├── mem_function_arg_types_undef.hpp │ ├── object_broadcast_issue.hpp │ ├── object_call_dispatch.hpp │ ├── object_call_issue.hpp │ ├── object_request_dispatch.hpp │ ├── object_request_issue.hpp │ ├── pod_template_structs.hpp │ ├── request_dispatch.hpp │ ├── request_future.hpp │ ├── request_issue.hpp │ ├── request_reply_handler.cpp │ ├── request_reply_handler.hpp │ ├── rpc.dox │ ├── rpc_includes.hpp │ ├── sample_sort.hpp │ ├── thread_local_send_buffer.cpp │ └── thread_local_send_buffer.hpp │ ├── scheduler │ ├── CMakeLists.txt │ ├── fifo_scheduler.cpp │ ├── fifo_scheduler.hpp │ ├── get_message_priority.hpp │ ├── ischeduler.hpp │ ├── priority_scheduler.cpp │ ├── priority_scheduler.hpp │ ├── queued_fifo_scheduler.cpp │ ├── queued_fifo_scheduler.hpp │ ├── scheduler_factory.hpp │ ├── scheduler_includes.hpp │ ├── scheduler_list.cpp │ ├── scheduler_list.hpp │ ├── sweep_scheduler.cpp │ └── sweep_scheduler.hpp │ ├── serialization │ ├── CMakeLists.txt │ ├── basic_types.hpp │ ├── conditional_serialize.hpp │ ├── has_load.hpp │ ├── has_save.hpp │ ├── iarchive.hpp │ ├── is_pod.hpp │ ├── iterator.hpp │ ├── list.hpp │ ├── map.hpp │ ├── oarchive.hpp │ ├── serializable_concept.hpp │ ├── serializable_pod.hpp │ ├── serialization.dox │ ├── serialization_includes.hpp │ ├── serialize.hpp │ ├── serialize_to_from_string.hpp │ ├── set.hpp │ ├── unordered_map.hpp │ ├── unordered_set.hpp │ ├── unsupported_serialize.hpp │ └── vector.hpp │ ├── ui │ ├── CMakeLists.txt │ ├── graphlab_visualization.js │ ├── index.html │ ├── intel_demo │ │ ├── graph_builder.json │ │ ├── graphlab_visualization.js │ │ ├── index.html │ │ └── style.css │ ├── metrics_server.cpp │ ├── metrics_server.hpp │ ├── mongoose │ │ ├── CMakeLists.txt │ │ ├── LICENSE │ │ ├── mongoose.cpp │ │ └── mongoose.h │ └── style.css │ ├── util │ ├── CMakeLists.txt │ ├── binary_parser.hpp │ ├── blocking_queue.hpp │ ├── bloom_filter.hpp │ ├── branch_hints.hpp │ ├── cache.hpp │ ├── chandy_misra.hpp │ ├── chandy_misra2.hpp │ ├── chandy_misra_lockfree.hpp │ ├── char_counting_sink.hpp │ ├── charstream.hpp │ ├── cuckoo_map.hpp │ ├── cuckoo_map_pow2.hpp │ ├── cuckoo_set_pow2.hpp │ ├── dense_bitset.hpp │ ├── empty.hpp │ ├── event_log.cpp │ ├── event_log.hpp │ ├── fast_multinomial.hpp │ ├── fiber_blocking_queue.hpp │ ├── fs_util.cpp │ ├── fs_util.hpp │ ├── generate_pds.hpp │ ├── generics │ │ ├── CMakeLists.txt │ │ ├── any.cpp │ │ ├── any.hpp │ │ ├── blob.hpp │ │ ├── block_linked_list.hpp │ │ ├── conditional_addition_wrapper.hpp │ │ ├── conditional_combiner_wrapper.hpp │ │ ├── counting_sort.hpp │ │ ├── csr_storage.hpp │ │ ├── dynamic_block.hpp │ │ ├── dynamic_csr_storage.hpp │ │ ├── float_selector.hpp │ │ ├── integer_selector.hpp │ │ ├── remove_member_pointer.hpp │ │ ├── robust_cast.hpp │ │ ├── shuffle.hpp │ │ ├── test_function_or_functor_type.hpp │ │ └── vector_zip.hpp │ ├── hash_functions.hpp │ ├── hashstream.hpp │ ├── hdfs.cpp │ ├── hdfs.hpp │ ├── hopscotch_map.hpp │ ├── hopscotch_set.hpp │ ├── hopscotch_table.hpp │ ├── inplace_lf_queue.cpp │ ├── inplace_lf_queue.hpp │ ├── inplace_lf_queue2.hpp │ ├── integer_mix.hpp │ ├── integer_selector.hpp │ ├── lock_free_internal.hpp │ ├── lock_free_pool.hpp │ ├── memory_info.cpp │ ├── memory_info.hpp │ ├── mpi_tools.cpp │ ├── mpi_tools.hpp │ ├── mutable_queue.hpp │ ├── net_util.cpp │ ├── net_util.hpp │ ├── random.cpp │ ├── random.hpp │ ├── resizing_array_sink.hpp │ ├── safe_circular_char_buffer.cpp │ ├── safe_circular_char_buffer.hpp │ ├── small_map.hpp │ ├── small_set.hpp │ ├── stl_util.hpp │ ├── synchronized_unordered_map.hpp │ ├── synchronized_unordered_map2.hpp │ ├── system_usage.hpp │ ├── timer.cpp │ ├── timer.hpp │ ├── tracepoint.cpp │ ├── tracepoint.hpp │ ├── uint128.hpp │ ├── union_find.hpp │ ├── util_includes.hpp │ ├── web_util.cpp │ └── web_util.hpp │ ├── version.hpp │ ├── vertex_program │ ├── CMakeLists.txt │ ├── context.hpp │ ├── icontext.hpp │ ├── ivertex_program.hpp │ ├── messages.hpp │ ├── op_plus_eq_concept.hpp │ └── vertex_program_includes.hpp │ ├── warp.hpp │ └── zookeeper │ ├── key_value.cpp │ ├── key_value.hpp │ ├── server_list.cpp │ ├── server_list.hpp │ ├── zookeeper_common.cpp │ └── zookeeper_common.hpp ├── tests ├── CMakeLists.txt ├── arbitrary_signal_test.cpp ├── async_consistent_test.cpp ├── chandy_misra.cxx ├── csr_storage_test.cxx ├── cuckootest.cpp ├── data │ ├── CMakeLists.txt │ ├── test_adj │ │ └── test.adj │ ├── test_snap │ │ └── test.snap │ └── test_tsv │ │ └── test.tsv ├── dc_consensus_test.cpp ├── dc_fiber_consensus_test.cpp ├── dc_test_sequentialization.cpp ├── dcsc_test.cpp ├── dense_bitset_test.cxx ├── dht_performance_test.cpp ├── distributed_chandy_misra_test.cpp ├── distributed_graph_test.cpp ├── distributed_ingress_test.cpp ├── empty_test.cxx ├── engine_terminator_bench.cxx ├── fiber_test.cpp ├── fibo_fiber_test.cpp ├── hdfs_test.cpp ├── hopscotch_test.cpp ├── local_graph_test.cxx ├── lock_free_pushback.cxx ├── mini_web_server.cpp ├── random_test.cxx ├── runtests.sh ├── scheduler_test.cxx ├── serializetests.cxx ├── sfinae_function_test.cpp ├── small_map_test.cxx ├── small_set_test.cxx ├── sort_test.cpp ├── synchronous_engine_test.cpp ├── test_lock_free_pool.cxx ├── test_parsers.cpp ├── test_vertex_set.cpp ├── thread_tools.cxx └── union_find_test.cxx └── toolkits ├── CMakeLists.txt ├── README.md ├── clustering ├── CMakeLists.txt ├── clustering.dox ├── generate_synthetic.cpp ├── graph_laplacian_for_sc.cpp ├── kmeans.cpp └── spectral_clustering.cpp ├── collaborative_filtering ├── CMakeLists.txt ├── adpredictor.cpp ├── als.cpp ├── biassgd.cpp ├── cdf.hpp ├── collaborative_filtering.dox ├── cosamp.hpp ├── doc.cpp ├── eigen_serialization.hpp ├── eigen_wrapper.hpp ├── implicit.hpp ├── make_synthetic_als_data.cpp ├── math.hpp ├── nmf.cpp ├── printouts.hpp ├── sgd.cpp ├── sparse_als.cpp ├── stats.hpp ├── svd.cpp ├── svdpp.cpp ├── types.hpp ├── wals.cpp ├── warp_als_coord.cpp └── warp_nmf.cpp ├── computer_vision ├── CMakeLists.txt ├── computer_vision.dox ├── eigen_serialization.cpp ├── eigen_serialization.hpp ├── gcgraph.hpp ├── grabcut.cpp ├── opencv_serialization.cpp ├── opencv_serialization.hpp ├── precomp.hpp ├── seam_finders_gr.hpp ├── stitch_full_main.cpp ├── stitch_grlab.hpp ├── stitch_main.cpp ├── stitch_main.hpp ├── stitch_opts.hpp ├── stitching.cpp ├── stitching_detailed.cpp └── utils.hpp ├── extensions ├── CMakeLists.txt ├── MurmurHash3.cpp ├── MurmurHash3.h ├── example.txt ├── extension.cpp ├── extension_data.hpp ├── extension_gas.hpp ├── extension_gas_base_types.hpp ├── extension_gas_lambda_wrapper.hpp ├── extension_graph.cpp ├── extension_graph.hpp ├── extension_main.cpp ├── extension_main.hpp ├── extension_pagerank.cpp ├── extensions.hpp └── pagerank_extension_driver.cpp ├── graph_algorithms ├── CMakeLists.txt ├── betweeness.cpp ├── closeness.cpp ├── djikstra.cpp ├── graph_analytics.dox └── prestige.cpp ├── graph_analytics ├── CMakeLists.txt ├── TSC.cpp ├── approximate_diameter.cpp ├── connected_component.cpp ├── connected_component_stats.cpp ├── degree_ordered_coloring.cpp ├── directed_triangle_count.cpp ├── eigen_vector_normalization.cpp ├── format_convert.cpp ├── graph_analytics.dox ├── graph_laplacian.cpp ├── http │ ├── index.html │ ├── make_jsons.m │ ├── style.css │ ├── top_users.json │ └── twitter_triangles.js ├── kcore.cpp ├── pagerank.cpp ├── partitioning.cpp ├── saturation_ordered_coloring.cpp ├── simple_coloring.cpp ├── simple_undirected_triangle_count.cpp ├── sssp.cpp ├── undirected_triangle_count.cpp ├── warp_bond_percolation.cpp ├── warp_coloring.cpp ├── warp_pagerank.cpp └── warp_pagerank2.cpp ├── graphical_models ├── CMakeLists.txt ├── ad3_qp.hpp ├── dd_grlab.hpp ├── dd_main.cpp ├── dd_main.hpp ├── dd_opts.hpp ├── deprecated │ ├── factors │ │ ├── CMakeLists.txt │ │ ├── binary_factor.cpp │ │ ├── binary_factor.hpp │ │ ├── discrete_variable.cpp │ │ ├── factor_includes.hpp │ │ ├── factor_test.cxx │ │ ├── unary_factor.cpp │ │ └── unary_factor.hpp │ ├── gibbs_sampling │ │ ├── CMakeLists.txt │ │ ├── README │ │ ├── chromatic_sampler.cpp │ │ ├── chromatic_sampler.hpp │ │ ├── factorized_model.cpp │ │ ├── factorized_model.hpp │ │ ├── global_variables.cpp │ │ ├── global_variables.hpp │ │ ├── image.cpp │ │ ├── image.hpp │ │ ├── jt_splash_sampler.cpp │ │ ├── jt_splash_sampler.hpp │ │ ├── junction_tree.cpp │ │ ├── junction_tree.hpp │ │ ├── make_denoise_alchemy.cpp │ │ ├── matlab │ │ │ ├── Makefile │ │ │ ├── asg2ind.m │ │ │ ├── compile_gibbs_sampler.m │ │ │ ├── gibbs_sampler.m │ │ │ ├── gibbs_sampler_impl.cpp │ │ │ ├── ind2asg.m │ │ │ ├── matwrap.hpp │ │ │ ├── table_factor.m │ │ │ └── tests │ │ │ │ ├── denoise_test.m │ │ │ │ ├── make_grid_model.m │ │ │ │ ├── small_test.m │ │ │ │ └── small_test2.m │ │ ├── mrf.cpp │ │ ├── mrf.hpp │ │ ├── pgibbs_tls.cpp │ │ ├── pgibbs_tls.hpp │ │ ├── run_statistics.hpp │ │ ├── sampler.cpp │ │ ├── util.cpp │ │ └── util.hpp │ ├── kernelbp │ │ ├── CMakeLists.txt │ │ └── old │ │ │ ├── BallTreeDensity.cpp │ │ │ ├── CMakeLists.txt │ │ │ ├── cpp │ │ │ ├── BallTree.h │ │ │ ├── BallTreeClass.cc │ │ │ ├── BallTreeDensity.h │ │ │ ├── BallTreeDensityClass.cc │ │ │ ├── NOTICE │ │ │ └── kernels.h │ │ │ ├── denoise.cpp │ │ │ ├── fakemex.h │ │ │ ├── image.hpp │ │ │ ├── kde.h │ │ │ ├── prob.hpp │ │ │ └── prodSampleEpsilon.hpp │ └── loopybp_denoise.cpp ├── eigen_serialization.cpp ├── eigen_serialization.hpp ├── factors │ ├── CMakeLists.txt │ ├── bp_graph_data.h │ ├── bp_vertex_program.hpp │ ├── dense_table.hpp │ ├── discrete_assignment.hpp │ ├── discrete_bounds.hpp │ ├── discrete_domain.hpp │ ├── discrete_variable.hpp │ ├── factor_graph.hpp │ ├── factor_graphs.dox │ ├── fast_discrete_assignment.hpp │ ├── sparse_index.hpp │ ├── sparse_table.hpp │ ├── table_base.hpp │ ├── table_factor.hpp │ └── tests │ │ ├── CMakeLists.txt │ │ ├── denoise │ │ ├── CMakeLists.txt │ │ ├── denoise.cpp │ │ ├── denoised_gm.png │ │ └── noisy_img.png │ │ ├── test_MAD_relation │ │ ├── CMakeLists.txt │ │ └── test_MAD_relation.cpp │ │ ├── test_bool_var │ │ ├── CMakeLists.txt │ │ ├── test_bool_var.cpp │ │ └── test_cat_bool_joint.cpp │ │ ├── test_dense_table │ │ ├── CMakeLists.txt │ │ └── test_dense_table.cpp │ │ └── test_sparse_table │ │ ├── CMakeLists.txt │ │ ├── test_neg_relation.cpp │ │ └── test_sparse_table.cpp ├── graphical_models.dox ├── lbp_structured_prediction.cpp ├── mplp_denoise.cpp ├── mplp_structured_prediction.cpp ├── profile_lbp_synthetic.cpp ├── profile_lbp_synthetic2.cpp ├── synthetic_image_data.cpp └── utils.hpp ├── linear_solvers ├── CMakeLists.txt ├── jacobi.cpp └── linear_solvers.dox ├── toolkits.dox └── topic_modeling ├── CMakeLists.txt ├── cgs_lda.cpp ├── cgs_lda_mimno_experimental.cpp ├── deprecated ├── cgs_lda.cpp 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