├── .gitignore ├── EcoSynth ├── .gitignore ├── CMakeLists.txt ├── CTestTestfile.cmake ├── Doxyfile ├── Doxyfile.in ├── FindLibSVM.cmake ├── FindOpenCL.cmake ├── FindZeroMQ.cmake ├── Icons │ ├── ._.DS_Store │ ├── ._activeEraseIcon.png │ ├── ._activeIcon.png │ ├── ._activeLockIcon.png │ ├── ._brushmodeIcon.png │ ├── ._brushmodefadeIcon.png │ ├── ._copymodeIcon.png │ ├── ._copymodefadeIcon.png │ ├── ._curvemodeIcon.png │ ├── ._curvemodefadeIcon.png │ ├── ._delIcon.png │ ├── ._dense-f.png │ ├── ._dense-t.png │ ├── ._eraseIcon.png │ ├── ._fadeIcon.png │ ├── ._fillmodeIcon.png │ ├── ._fillmodefadeIcon.png │ ├── ._heal-f.png │ ├── ._heal-t.png │ ├── ._lockIcon.png │ ├── ._manipDecals.png │ ├── ._manipDecalsNew.png │ ├── ._older-f.png │ ├── ._older-t.png │ ├── ._pointmodeIcon.png │ ├── ._pointmodefadeIcon.png │ ├── ._similar-f.png │ ├── ._similar-t.png │ ├── ._sparse-f.png │ ├── ._sparse-t.png │ ├── ._textest.png │ ├── ._unassignedIcon.png │ ├── ._variable-f.png │ ├── ._variable-t.png │ ├── ._younger-f.png │ ├── ._younger-t.png │ ├── activeEraseIcon.png │ ├── activeIcon.png │ ├── activeLockIcon.png │ ├── brushmodeIcon.png │ ├── brushmodefadeIcon.png │ ├── copymodeIcon.png │ ├── copymodefadeIcon.png │ ├── curvemodeIcon.png │ ├── curvemodefadeIcon.png │ ├── delIcon.png │ ├── dense-f.png │ ├── dense-t.png │ ├── eraseIcon.png │ ├── fadeIcon.png │ ├── fillmodeIcon.png │ ├── fillmodefadeIcon.png │ ├── heal-f.png │ ├── heal-t.png │ ├── lockIcon.png │ ├── manipDecals.png │ ├── manipDecalsNew.png │ ├── older-f.png │ ├── older-t.png │ ├── pointmodeIcon.png │ ├── pointmodefadeIcon.png │ ├── similar-f.png │ ├── similar-t.png │ ├── sparse-f.png │ ├── sparse-t.png │ ├── textest.png │ ├── unassignedIcon.png │ ├── variable-f.png │ ├── variable-t.png │ ├── younger-f.png │ └── younger-t.png ├── README.md ├── buildecolearn.sh ├── clh │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── Makefile │ ├── clh.cpp │ ├── clh.h │ ├── clhpp.h │ ├── climgformats.cpp │ ├── cmake_install.cmake │ ├── texmark.cl │ ├── texmark.cpp │ ├── timer.cpp │ └── timer.h ├── cmake_install.cmake ├── colourmaps │ ├── ._.DS_Store │ ├── .__bgyr_35-85_c73_n256.csv │ ├── ._cyclic_grey_15-85_c0_n256.csv │ ├── ._cyclic_grey_15-85_c0_n256_s25.csv │ ├── ._cyclic_mrybm_35-75_c68_n256.csv │ ├── ._cyclic_mrybm_35-75_c68_n256_s25.csv │ ├── ._cyclic_mygbm_30-95_c78_n256.csv │ ├── ._cyclic_mygbm_30-95_c78_n256_s25.csv │ ├── ._cyclic_wrwbw_40-90_c42_n256.csv │ ├── ._cyclic_wrwbw_40-90_c42_n256_s25.csv │ ├── ._diverging-isoluminant_cjm_75_c23_n256.csv │ ├── ._diverging-isoluminant_cjm_75_c24_n256.csv │ ├── ._diverging-isoluminant_cjo_70_c25_n256.csv │ ├── ._diverging-linear_bjr_30-55_c53_n256.csv │ ├── ._diverging-linear_bjy_30-90_c45_n256.csv │ ├── ._diverging-rainbow_bgymr_45-85_c67_n256.csv │ ├── ._diverging_bkr_55-10_c35_n256.csv │ ├── ._diverging_bky_60-10_c30_n256.csv │ ├── ._diverging_bwr_40-95_c42_n256.csv │ ├── ._diverging_bwr_55-98_c37_n256.csv │ ├── ._diverging_cwm_80-100_c22_n256.csv │ ├── ._diverging_gkr_60-10_c40_n256.csv │ ├── ._diverging_gwr_55-95_c38_n256.csv │ ├── ._diverging_gwv_55-95_c39_n256.csv │ ├── ._isoluminant_cgo_70_c39_n256.csv │ ├── ._isoluminant_cgo_80_c38_n256.csv │ ├── ._isoluminant_cm_70_c39_n256.csv │ ├── ._linear_bgy_10-95_c74_n256.csv │ ├── ._linear_bgyw_15-100_c67_n256.csv │ ├── ._linear_bgyw_15-100_c68_n256.csv │ ├── ._linear_blue_5-95_c73_n256.csv │ ├── ._linear_blue_95-50_c20_n256.csv │ ├── ._linear_bmw_5-95_c86_n256.csv │ ├── ._linear_bmw_5-95_c89_n256.csv │ ├── ._linear_bmy_10-95_c71_n256.csv │ ├── ._linear_bmy_10-95_c78_n256.csv │ ├── ._linear_gow_60-85_c27_n256.csv │ ├── ._linear_gow_65-90_c35_n256.csv │ ├── ._linear_green_5-95_c69_n256.csv │ ├── ._linear_grey_0-100_c0_n256.csv │ ├── ._linear_grey_10-95_c0_n256.csv │ ├── ._linear_kry_5-95_c72_n256.csv │ ├── ._linear_kry_5-98_c75_n256.csv │ ├── ._linear_kryw_5-100_c64_n256.csv │ ├── ._linear_kryw_5-100_c67_n256.csv │ ├── ._linear_ternary-blue_0-44_c57_n256.csv │ ├── ._linear_ternary-green_0-46_c42_n256.csv │ ├── ._linear_ternary-red_0-50_c52_n256.csv │ ├── ._rainbow_bgyr_35-85_c72_n256.csv │ ├── ._rainbow_bgyr_35-85_c73_n256.csv │ ├── ._rainbow_bgyrm_35-85_c69_n256.csv │ ├── ._rainbow_bgyrm_35-85_c71_n256.csv │ ├── ._readme.txt │ ├── _bgyr_35-85_c73_n256.csv │ ├── cyclic_grey_15-85_c0_n256.csv │ ├── cyclic_grey_15-85_c0_n256_s25.csv │ ├── cyclic_mrybm_35-75_c68_n256.csv │ ├── cyclic_mrybm_35-75_c68_n256_s25.csv │ ├── cyclic_mygbm_30-95_c78_n256.csv │ ├── cyclic_mygbm_30-95_c78_n256_s25.csv │ ├── cyclic_wrwbw_40-90_c42_n256.csv │ ├── cyclic_wrwbw_40-90_c42_n256_s25.csv │ ├── diverging-isoluminant_cjm_75_c23_n256.csv │ ├── diverging-isoluminant_cjm_75_c24_n256.csv │ ├── diverging-isoluminant_cjo_70_c25_n256.csv │ ├── diverging-linear_bjr_30-55_c53_n256.csv │ ├── diverging-linear_bjy_30-90_c45_n256.csv │ ├── diverging-rainbow_bgymr_45-85_c67_n256.csv │ ├── diverging_bkr_55-10_c35_n256.csv │ ├── diverging_bky_60-10_c30_n256.csv │ ├── diverging_bwr_40-95_c42_n256.csv │ ├── diverging_bwr_55-98_c37_n256.csv │ ├── diverging_cwm_80-100_c22_n256.csv │ ├── diverging_gkr_60-10_c40_n256.csv │ ├── diverging_gwr_55-95_c38_n256.csv │ ├── diverging_gwv_55-95_c39_n256.csv │ ├── isoluminant_cgo_70_c39_n256.csv │ ├── isoluminant_cgo_80_c38_n256.csv │ ├── isoluminant_cm_70_c39_n256.csv │ ├── linear_bgy_10-95_c74_n256.csv │ ├── linear_bgyw_15-100_c67_n256.csv │ ├── linear_bgyw_15-100_c68_n256.csv │ ├── linear_blue_5-95_c73_n256.csv │ ├── linear_blue_95-50_c20_n256.csv │ ├── linear_bmw_5-95_c86_n256.csv │ ├── linear_bmw_5-95_c89_n256.csv │ ├── linear_bmy_10-95_c71_n256.csv │ ├── linear_bmy_10-95_c78_n256.csv │ ├── linear_gow_60-85_c27_n256.csv │ ├── linear_gow_65-90_c35_n256.csv │ ├── linear_green_5-95_c69_n256.csv │ ├── linear_grey_0-100_c0_n256.csv │ ├── linear_grey_10-95_c0_n256.csv │ ├── linear_kry_5-95_c72_n256.csv │ ├── linear_kry_5-98_c75_n256.csv │ ├── linear_kryw_5-100_c64_n256.csv │ ├── linear_kryw_5-100_c67_n256.csv │ ├── linear_ternary-blue_0-44_c57_n256.csv │ ├── linear_ternary-green_0-46_c42_n256.csv │ ├── linear_ternary-red_0-50_c52_n256.csv │ ├── rainbow_bgyr_35-85_c72_n256.csv │ ├── rainbow_bgyr_35-85_c73_n256.csv │ ├── rainbow_bgyrm_35-85_c69_n256.csv │ ├── rainbow_bgyrm_35-85_c71_n256.csv │ └── readme.txt ├── common │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── Makefile │ ├── cmake_install.cmake │ ├── color2gray.cpp │ ├── constraint_interface.h │ ├── debug_list.h │ ├── debug_string.h │ ├── debug_unordered_map.h │ ├── debug_vector.h │ ├── exrrewrite.cpp │ ├── gdal2exr.cpp │ ├── heighttool.cpp │ ├── initialize.cpp │ ├── initialize.h │ ├── map.cpp │ ├── map.h │ ├── map2exr.cpp │ ├── map_rgba.cpp │ ├── map_rgba.h │ ├── maputils.cpp │ ├── maputils.h │ ├── mathutils.cpp │ ├── mathutils.h │ ├── obj.cpp │ ├── obj.h │ ├── progress.cpp │ ├── progress.h │ ├── region.cpp │ ├── region.h │ ├── serialize.h │ ├── source2cpp.h │ ├── source2cpp.py │ ├── stats.cpp │ ├── stats.h │ ├── str.h │ ├── terragen.cpp │ ├── terragen.h │ ├── timer.cpp │ ├── timer.h │ └── utsclassify.cpp ├── doc │ ├── ._.DS_Store │ ├── ._html │ └── html │ │ ├── ._bc_s.png │ │ ├── ._bdwn.png │ │ ├── ._closed.png │ │ ├── ._doxygen.css │ │ ├── ._doxygen.png │ │ ├── ._dynsections.js │ │ ├── ._ftv2blank.png │ │ ├── ._ftv2cl.png │ │ ├── ._ftv2doc.png │ │ ├── ._ftv2folderclosed.png │ │ ├── ._ftv2folderopen.png │ │ ├── ._ftv2lastnode.png │ │ ├── ._ftv2link.png │ │ ├── ._ftv2mlastnode.png │ │ ├── ._ftv2mnode.png │ │ ├── ._ftv2mo.png │ │ ├── ._ftv2node.png │ │ ├── ._ftv2ns.png │ │ ├── ._ftv2plastnode.png │ │ ├── ._ftv2pnode.png │ │ ├── ._ftv2splitbar.png │ │ ├── ._ftv2vertline.png │ │ ├── ._graph_legend.html │ │ ├── ._graph_legend.md5 │ │ ├── ._graph_legend.png │ │ ├── ._index.html │ │ ├── ._jquery.js │ │ ├── ._nav_f.png │ │ ├── ._nav_g.png │ │ ├── ._nav_h.png │ │ ├── ._navtree.css │ │ ├── ._navtree.js │ │ ├── ._navtreeindex0.js │ │ ├── ._open.png │ │ ├── ._resize.js │ │ ├── ._search │ │ ├── ._sync_off.png │ │ ├── ._sync_on.png │ │ ├── ._tab_a.png │ │ ├── ._tab_b.png │ │ ├── ._tab_h.png │ │ ├── ._tab_s.png │ │ ├── ._tabs.css │ │ ├── bc_s.png │ │ ├── bdwn.png │ │ ├── closed.png │ │ ├── doxygen.css │ │ ├── doxygen.png │ │ ├── dynsections.js │ │ ├── ftv2blank.png │ │ ├── ftv2cl.png │ │ ├── ftv2doc.png │ │ ├── ftv2folderclosed.png │ │ ├── ftv2folderopen.png │ │ ├── ftv2lastnode.png │ │ ├── ftv2link.png │ │ ├── ftv2mlastnode.png │ │ ├── ftv2mnode.png │ │ ├── ftv2mo.png │ │ ├── ftv2node.png │ │ ├── ftv2ns.png │ │ ├── ftv2plastnode.png │ │ ├── ftv2pnode.png │ │ ├── ftv2splitbar.png │ │ ├── ftv2vertline.png │ │ ├── graph_legend.html │ │ ├── graph_legend.md5 │ │ ├── graph_legend.png │ │ ├── index.html │ │ ├── jquery.js │ │ ├── nav_f.png │ │ ├── nav_g.png │ │ ├── nav_h.png │ │ ├── navtree.css │ │ ├── navtree.js │ │ ├── navtreeindex0.js │ │ ├── open.png │ │ ├── resize.js │ │ ├── search │ │ ├── ._close.png │ │ ├── ._mag_sel.png │ │ ├── ._nomatches.html │ │ ├── ._search.css │ │ ├── ._search.js │ │ ├── ._search_l.png │ │ ├── ._search_m.png │ │ ├── ._search_r.png │ │ ├── close.png │ │ ├── mag_sel.png │ │ ├── nomatches.html │ │ ├── search.css │ │ ├── search.js │ │ ├── search_l.png │ │ ├── search_m.png │ │ └── search_r.png │ │ ├── sync_off.png │ │ ├── sync_on.png │ │ ├── tab_a.png │ │ ├── tab_b.png │ │ ├── tab_h.png │ │ ├── tab_s.png │ │ └── tabs.css ├── ecodata │ ├── ._.DS_Store │ ├── ._modify_height_ratio.py │ └── sonoma.db ├── khronos_headers │ ├── ._.DS_Store │ ├── ._CL │ ├── ._EGL │ ├── ._GL │ ├── ._GLES │ ├── ._GLES2 │ ├── ._KD │ ├── ._KHR │ ├── ._VG │ ├── CL │ │ ├── cl.h │ │ ├── cl.hpp │ │ ├── cl_d3d10.h │ │ ├── cl_d3d11.h │ │ ├── cl_dx9_media_sharing.h │ │ ├── cl_ext.h │ │ ├── cl_gl.h │ │ ├── cl_gl_ext.h │ │ ├── cl_platform.h │ │ └── opencl.h │ ├── EGL │ │ ├── egl.h │ │ ├── eglext.h │ │ └── eglplatform.h │ ├── GL │ │ ├── gl3.h │ │ ├── glext.h │ │ ├── glxext.h │ │ └── wglext.h │ ├── GLES │ │ ├── egl.h │ │ ├── gl.h │ │ ├── glext.h │ │ └── glplatform.h │ ├── GLES2 │ │ ├── gl2.h │ │ ├── gl2ext.h │ │ └── gl2platform.h │ ├── KD │ │ ├── KHR_float64.h │ │ ├── KHR_formatted.h │ │ ├── KHR_perfcounter.h │ │ ├── KHR_thread_storage.h │ │ ├── kd.h │ │ └── kdplatform.h │ ├── KHR │ │ └── khrplatform.h │ └── VG │ │ ├── openvg.h │ │ ├── vgext.h │ │ ├── vgplatform.h │ │ └── vgu.h ├── kmeans │ ├── CMakeLists.txt │ ├── buildkmeans.sh │ ├── kmeans_old.h │ └── src │ │ ├── kmeans.cpp │ │ ├── kmeans.h │ │ └── main.cpp ├── run_synthserver.sh ├── undersample │ ├── CMakeLists.txt │ └── main.cpp └── viewer │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── ConfigReader.cpp │ ├── ConfigReader.h │ ├── Icons │ ├── ._.DS_Store │ ├── ._activeEraseIcon.png │ ├── ._activeIcon.png │ ├── ._activeLockIcon.png │ ├── ._brushmodeIcon.png │ ├── ._brushmodefadeIcon.png │ ├── ._curvemodeIcon.png │ ├── ._curvemodefadeIcon.png │ ├── ._delIcon.png │ ├── ._dense-f.png │ ├── ._dense-t.png │ ├── ._eraseIcon.png │ ├── ._fadeIcon.png │ ├── ._fillmodeIcon.png │ ├── ._fillmodefadeIcon.png │ ├── ._heal-f.png │ ├── ._heal-t.png │ ├── ._lockIcon.png │ ├── ._manipDecals.png │ ├── ._manipDecalsNew.png │ ├── ._older-f.png │ ├── ._older-t.png │ ├── ._pointmodeIcon.png │ ├── ._pointmodefadeIcon.png │ ├── ._similar-f.png │ ├── ._similar-t.png │ ├── ._sparse-f.png │ ├── ._sparse-t.png │ ├── ._textest.png │ ├── ._unassignedIcon.png │ ├── ._variable-f.png │ ├── ._variable-t.png │ ├── ._younger-f.png │ ├── ._younger-t.png │ ├── activeEraseIcon.png │ ├── activeIcon.png │ ├── activeLockIcon.png │ ├── brushmodeIcon.png │ ├── brushmodefadeIcon.png │ ├── curvemodeIcon.png │ ├── curvemodefadeIcon.png │ ├── delIcon.png │ ├── dense-f.png │ ├── dense-t.png │ ├── eraseIcon.png │ ├── fadeIcon.png │ ├── fillmodeIcon.png │ ├── fillmodefadeIcon.png │ ├── heal-f.png │ ├── heal-t.png │ ├── lockIcon.png │ ├── manipDecals.png │ ├── manipDecalsNew.png │ ├── older-f.png │ ├── older-t.png │ ├── pointmodeIcon.png │ ├── pointmodefadeIcon.png │ ├── similar-f.png │ ├── similar-t.png │ ├── sparse-f.png │ ├── sparse-t.png │ ├── textest.png │ ├── unassignedIcon.png │ ├── variable-f.png │ ├── variable-t.png │ ├── younger-f.png │ └── younger-t.png │ ├── Makefile │ ├── MapFloat.h │ ├── MinimalPlant.h │ ├── README │ ├── TerrainRender.pro │ ├── TerrainRender.pro.user │ ├── basicgui_automoc.cpp │ ├── clusters.cpp │ ├── clusters.h │ ├── cmake_install.cmake │ ├── convertpaintingdialog.cpp │ ├── convertpaintingdialog.h │ ├── convertpaintingdialog.ui │ ├── descriptor.cpp │ ├── descriptor.h │ ├── dice_roller.cpp │ ├── dice_roller.h │ ├── eco.cpp │ ├── eco.h │ ├── fill.cpp │ ├── fill.h │ ├── glheaders.h │ ├── glwidget.cpp │ ├── glwidget.h │ ├── grass.cpp │ ├── grass.h │ ├── gui_automoc.cpp │ ├── histcomp_window.cpp │ ├── histcomp_window.h │ ├── interp.cpp │ ├── interp.h │ ├── ipc.cpp │ ├── ipc.h │ ├── main.cpp │ ├── moc_glwidget.cpp │ ├── moc_palette.cpp │ ├── moc_terraintabs.cpp │ ├── moc_verticalscrollarea.cpp │ ├── moc_window.cpp │ ├── moisture.cpp │ ├── moisture.h │ ├── palette.cpp │ ├── palette.h │ ├── palette_base.cpp │ ├── palette_base.h │ ├── pft.cpp │ ├── pft.h │ ├── shaderProgram.cpp │ ├── shaderProgram.h │ ├── shaders │ ├── ._.DS_Store │ ├── ._basic.frag │ ├── ._basic.vert │ ├── ._canopy.frag │ ├── ._canopy.vert │ ├── ._genNormal.frag │ ├── ._genNormal.vert │ ├── ._phong.frag │ ├── ._phong.vert │ ├── ._phongRS.frag │ ├── ._phongRS.vert │ ├── ._phongRSmanip.frag │ ├── ._phongRSmanip.vert │ ├── ._rad_scaling_pass1.frag │ ├── ._rad_scaling_pass1.vert │ ├── ._rad_scaling_pass2.frag │ ├── ._rad_scaling_pass2.vert │ ├── ._simple.frag │ ├── ._simple.vert │ ├── ._sun.frag │ ├── ._sun.vert │ ├── .phongRS.frag.swn │ ├── .phongRS.vert.swn │ ├── .phongRStextures.frag.swm │ ├── .phongRStextures.frag.swn │ ├── .phongRStextures.vert.swm │ ├── .phongRStextures.vert.swn │ ├── basic.frag │ ├── basic.vert │ ├── canopy.frag │ ├── canopy.vert │ ├── genNormal.frag │ ├── genNormal.vert │ ├── phong.frag │ ├── phong.vert │ ├── phongRS.frag │ ├── phongRS.vert │ ├── phongRSmanip.frag │ ├── phongRSmanip.vert │ ├── phongRStextures.frag │ ├── phongRStextures.vert │ ├── rad_scaling_pass1.frag │ ├── rad_scaling_pass1.vert │ ├── rad_scaling_pass2.frag │ ├── rad_scaling_pass2.vert │ ├── simple.frag │ ├── simple.vert │ ├── sun.frag │ └── sun.vert │ ├── shape.cpp │ ├── shape.h │ ├── sim.cpp │ ├── sim.h │ ├── speciesColoursWindow.cpp │ ├── speciesColoursWindow.h │ ├── specpalette_window.cpp │ ├── specpalette_window.h │ ├── specselect_window.cpp │ ├── specselect_window.h │ ├── stroke.cpp │ ├── stroke.h │ ├── sun.cpp │ ├── sun.h │ ├── synth.cpp │ ├── synth.h │ ├── terrain.cpp │ ├── terrain.h │ ├── test_specassign.cpp │ ├── tests │ ├── CMakeLists.txt │ └── test_canopy_placement.cpp │ ├── timer.cpp │ ├── timer.h │ ├── trenderer.cpp │ ├── trenderer.h │ ├── typemap.cpp │ ├── typemap.h │ ├── vecpnt.cpp │ ├── vecpnt.h │ ├── view.cpp │ ├── view.h │ ├── waterfill.cpp │ ├── waterfill.h │ ├── window.cpp │ └── window.h ├── LICENSE ├── README.md ├── UnderSim ├── CMakeLists.txt ├── CTestTestfile.cmake ├── Doxyfile ├── Doxyfile.in ├── FindLibSVM.cmake ├── FindOpenCL.cmake ├── README-UnderSim.txt ├── buildundersim.sh ├── clh │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── Makefile │ ├── clh.cpp │ ├── clh.h │ ├── clhpp.h │ ├── climgformats.cpp │ ├── cmake_install.cmake │ ├── texmark.cl │ ├── texmark.cpp │ ├── timer.cpp │ └── timer.h ├── cmake_install.cmake ├── common │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── Makefile │ ├── cmake_install.cmake │ ├── color2gray.cpp │ ├── constraint_interface.h │ ├── debug_list.h │ ├── debug_string.h │ ├── debug_unordered_map.h │ ├── debug_vector.h │ ├── exrrewrite.cpp │ ├── gdal2exr.cpp │ ├── heighttool.cpp │ ├── initialize.cpp │ ├── initialize.h │ ├── map.cpp │ ├── map.h │ ├── map2exr.cpp │ ├── map_rgba.cpp │ ├── map_rgba.h │ ├── maputils.cpp │ ├── maputils.h │ ├── mathutils.cpp │ ├── mathutils.h │ ├── obj.cpp │ ├── obj.h │ ├── progress.cpp │ ├── progress.h │ ├── region.cpp │ ├── region.h │ ├── serialize.h │ ├── source2cpp.cpp │ ├── source2cpp.h │ ├── source2cpp.py │ ├── stats.cpp │ ├── stats.h │ ├── str.h │ ├── terragen.cpp │ ├── terragen.h │ ├── timer.cpp │ ├── timer.h │ └── utsclassify.cpp ├── doc │ └── html │ │ ├── bc_s.png │ │ ├── bdwn.png │ │ ├── closed.png │ │ ├── doxygen.css │ │ ├── doxygen.png │ │ ├── dynsections.js │ │ ├── ftv2blank.png │ │ ├── ftv2cl.png │ │ ├── ftv2doc.png │ │ ├── ftv2folderclosed.png │ │ ├── ftv2folderopen.png │ │ ├── ftv2lastnode.png │ │ ├── ftv2link.png │ │ ├── ftv2mlastnode.png │ │ ├── ftv2mnode.png │ │ ├── ftv2mo.png │ │ ├── ftv2node.png │ │ ├── ftv2ns.png │ │ ├── ftv2plastnode.png │ │ ├── ftv2pnode.png │ │ ├── ftv2splitbar.png │ │ ├── ftv2vertline.png │ │ ├── graph_legend.html │ │ ├── graph_legend.md5 │ │ ├── graph_legend.png │ │ ├── index.html │ │ ├── jquery.js │ │ ├── nav_f.png │ │ ├── nav_g.png │ │ ├── nav_h.png │ │ ├── navtree.css │ │ ├── navtree.js │ │ ├── navtreeindex0.js │ │ ├── open.png │ │ ├── resize.js │ │ ├── search │ │ ├── close.png │ │ ├── mag_sel.png │ │ ├── nomatches.html │ │ ├── search.css │ │ ├── search.js │ │ ├── search_l.png │ │ ├── search_m.png │ │ └── search_r.png │ │ ├── sync_off.png │ │ ├── sync_on.png │ │ ├── tab_a.png │ │ ├── tab_b.png │ │ ├── tab_h.png │ │ ├── tab_s.png │ │ └── tabs.css ├── khronos_headers │ ├── CL │ │ ├── cl.h │ │ ├── cl.hpp │ │ ├── cl_d3d10.h │ │ ├── cl_d3d11.h │ │ ├── cl_dx9_media_sharing.h │ │ ├── cl_ext.h │ │ ├── cl_gl.h │ │ ├── cl_gl_ext.h │ │ ├── cl_platform.h │ │ └── opencl.h │ ├── EGL │ │ ├── egl.h │ │ ├── eglext.h │ │ └── eglplatform.h │ ├── GL │ │ ├── gl3.h │ │ ├── glext.h │ │ ├── glxext.h │ │ └── wglext.h │ ├── GLES │ │ ├── egl.h │ │ ├── gl.h │ │ ├── glext.h │ │ └── glplatform.h │ ├── GLES2 │ │ ├── gl2.h │ │ ├── gl2ext.h │ │ └── gl2platform.h │ ├── KD │ │ ├── KHR_float64.h │ │ ├── KHR_formatted.h │ │ ├── KHR_perfcounter.h │ │ ├── KHR_thread_storage.h │ │ ├── kd.h │ │ └── kdplatform.h │ ├── KHR │ │ └── khrplatform.h │ └── VG │ │ ├── openvg.h │ │ ├── vgext.h │ │ ├── vgplatform.h │ │ └── vgu.h └── sim │ ├── CMakeLists.txt │ ├── CTestTestfile.cmake │ ├── Icons │ ├── activeEraseIcon.png │ ├── activeIcon.png │ ├── activeLockIcon.png │ ├── brushmodeIcon.png │ ├── brushmodefadeIcon.png │ ├── curvemodeIcon.png │ ├── curvemodefadeIcon.png │ ├── delIcon.png │ ├── dense-f.png │ ├── dense-t.png │ ├── eraseIcon.png │ ├── fadeIcon.png │ ├── fillmodeIcon.png │ ├── fillmodefadeIcon.png │ ├── heal-f.png │ ├── heal-t.png │ ├── lockIcon.png │ ├── manipDecals.png │ ├── manipDecalsNew.png │ ├── older-f.png │ ├── older-t.png │ ├── pointmodeIcon.png │ ├── pointmodefadeIcon.png │ ├── similar-f.png │ ├── similar-t.png │ ├── sparse-f.png │ ├── sparse-t.png │ ├── textest.png │ ├── unassignedIcon.png │ ├── variable-f.png │ ├── variable-t.png │ ├── younger-f.png │ └── younger-t.png │ ├── Makefile │ ├── README │ ├── TerrainRender.pro │ ├── TerrainRender.pro.user │ ├── basicgui_automoc.cpp │ ├── cmake_install.cmake │ ├── descriptor.cpp │ ├── descriptor.h │ ├── dice_roller.cpp │ ├── dice_roller.h │ ├── eco.cpp │ ├── eco.h │ ├── glheaders.h │ ├── glwidget.cpp │ ├── glwidget.h │ ├── grass.cpp │ ├── grass.h │ ├── gui_automoc.cpp │ ├── main.cpp │ ├── main_sunsim.cpp │ ├── moc_glwidget.cpp │ ├── moc_palette.cpp │ ├── moc_terraintabs.cpp │ ├── moc_verticalscrollarea.cpp │ ├── moc_window.cpp │ ├── moisture.cpp │ ├── moisture.h │ ├── pft.cpp │ ├── pft.h │ ├── shaderProgram.cpp │ ├── shaderProgram.h │ ├── shaders │ ├── basic.frag │ ├── basic.vert │ ├── canopy.frag │ ├── canopy.vert │ ├── genNormal.frag │ ├── genNormal.vert │ ├── phong.frag │ ├── phong.vert │ ├── phongRS.frag │ ├── phongRS.vert │ ├── phongRSmanip.frag │ ├── phongRSmanip.vert │ ├── rad_scaling_pass1.frag │ ├── rad_scaling_pass1.vert │ ├── rad_scaling_pass2.frag │ ├── rad_scaling_pass2.vert │ ├── simple.frag │ ├── simple.vert │ ├── sun.frag │ └── sun.vert │ ├── shape.cpp │ ├── shape.h │ ├── sim.cpp │ ├── sim.h │ ├── stroke.cpp │ ├── stroke.h │ ├── sun.cpp │ ├── sun.h │ ├── terrain.cpp │ ├── terrain.h │ ├── timer.cpp │ ├── timer.h │ ├── trenderer.cpp │ ├── trenderer.h │ ├── typemap.cpp │ ├── typemap.h │ ├── vecpnt.cpp │ ├── vecpnt.h │ ├── view.cpp │ ├── view.h │ ├── waterfill.cpp │ ├── waterfill.h │ ├── window.cpp │ └── window.h ├── canopy_placement ├── canopy_placer.cpp ├── canopy_placer.h ├── copy_chm_texture.frag ├── copy_chm_texture.vert ├── create_cpp_obj.py ├── diff_texture.frag ├── diff_texture.vert ├── gl_wrapper.cpp ├── gl_wrapper.h ├── gpu_procs.cu ├── gpu_procs.h ├── main.cpp ├── show_float_texture.frag ├── show_float_texture.vert ├── show_texture.frag ├── show_texture.vert ├── show_uint8_texture.frag ├── show_uint8_texture.vert ├── species_assign.cpp ├── species_assign.h ├── sphere.frag ├── sphere.obj ├── sphere.vert ├── sphere_fast.frag ├── sphere_fast.vert ├── sphere_obj_string.cpp ├── sphere_obj_string.h ├── subtract_chm.frag ├── subtract_chm.vert ├── sum_general.frag ├── sum_general.vert ├── summation.frag ├── summation.vert └── test_upsample.cpp ├── cluster_distribs ├── CMakeLists.txt └── src │ ├── AllClusterInfo.cpp │ ├── AllClusterInfo.h │ ├── CMakeCache.txt │ ├── CMakeLists.txt │ ├── ClusterAssign.cpp │ ├── ClusterAssign.h │ ├── ClusterData.cpp │ ├── ClusterData.h │ ├── ClusterDistribDerivator.cpp │ ├── ClusterDistribDerivator.h │ ├── ClusterMaps.cpp │ ├── ClusterMaps.h │ ├── ClusterMatrices.cpp │ ├── ClusterMatrices.h │ ├── HistogramDistrib.cpp │ ├── HistogramDistrib.h │ ├── HistogramMatrix.cpp │ ├── HistogramMatrix.h │ ├── JSONHandler.h │ ├── Makefile │ ├── MinimalPlant.cpp │ ├── MinimalPlant.h │ ├── PlantSpatialHashmap.cpp │ ├── PlantSpatialHashmap.h │ ├── UndergrowthRefiner.cpp │ ├── UndergrowthRefiner.h │ ├── UndergrowthSampler.cpp │ ├── UndergrowthSampler.h │ ├── cmake_install.cmake │ ├── common.cpp │ ├── common.h │ ├── dice.cpp │ ├── dice.h │ ├── distribution.cpp │ ├── distribution.h │ ├── generic_rng.cpp │ ├── generic_rng.h │ ├── main.cpp │ ├── main_basic_pdb.cpp │ ├── main_read.cpp │ ├── main_sample.cpp │ ├── src │ ├── Makefile │ └── cmake_install.cmake │ ├── test_rng │ ├── test_rng.cpp │ ├── test_synth.cpp │ └── tests.cpp ├── common ├── basic_types.h ├── constants.cpp ├── constants.h ├── custom_exceptions.cpp ├── custom_exceptions.h └── misc.h ├── data_importer ├── AbioticMapper.cpp ├── AbioticMapper.h ├── convert_to_bin ├── convert_to_bin.cpp ├── data_importer.cpp ├── data_importer.h ├── extract_png.cpp ├── extract_png.h ├── lodepng.cpp ├── lodepng.h ├── map_procs.cu └── map_procs.h ├── data_preproc ├── CMakeLists.txt ├── canopy_placement │ ├── CMakeLists.txt │ └── main.cpp ├── common_data │ ├── adapted_csvs │ │ ├── allometryTable.csv │ │ ├── biomeStatsTable.csv │ │ ├── coldTolLow.csv │ │ ├── droughtTolLow.csv │ │ ├── floodTolUpper.csv │ │ ├── growthMonthTable.csv │ │ ├── modelDetails.csv │ │ ├── modelMapping.csv │ │ ├── monthlies.csv │ │ ├── shadeTolLow.csv │ │ ├── slopeTolUpper.csv │ │ ├── speciesTable.csv │ │ ├── subBiomeTable.csv │ │ └── sunTolUpper.csv │ ├── allometryTable.csv │ ├── biomeStatsTable.csv │ ├── coldTolLow.csv │ ├── convert_numbering.py │ ├── create_specratio_csv.py │ ├── databaseSchema.odp │ ├── droughtTolLow.csv │ ├── floodTolUpper.csv │ ├── growthMonthTable.csv │ ├── modelDetails.csv │ ├── modelMapping.csv │ ├── monthlies.csv │ ├── regen.sh │ ├── shadeTolLow.csv │ ├── slopeTolUpper.csv │ ├── speciesTable (full-backup).csv │ ├── speciesTable(properbackup).csv │ ├── speciesTable.csv │ ├── subBiomeMapping (backup).csv │ ├── subBiomeMapping.csv │ ├── subBiomeMapping.csv_new │ ├── subBiomeTable.csv │ ├── subbiome1Species.db │ ├── subbiome_adaptvals.txt │ └── sunTolUpper.csv ├── extract_script │ ├── .sonoma_extract.py.swn │ ├── base_biome.txt │ ├── base_biome_old(Before subbiomes).txt │ ├── base_clim.txt │ ├── base_species_params.txt │ ├── canopy_placement_mass.sh │ ├── count_pdbcontents.sh │ ├── create_circ_count_txts.sh │ ├── extract_data.py │ ├── extract_mass.sh │ ├── extract_sonomatests.sh │ ├── run_all_mass.sh │ ├── sonoma_extract.py │ ├── sunsim_canopy_mass.sh │ ├── test_canopy_placement.sh │ ├── test_extract.sh │ ├── test_simspec_gen.py │ └── undergrowth_mass.sh ├── grass_sim │ ├── CMakeLists.txt │ ├── grass_sim.cpp │ ├── grass_sim.h │ └── main.cpp ├── pso │ ├── pso.cpp │ └── pso.h ├── slope_compute │ ├── CMakeLists.txt │ ├── Makefile │ ├── comp_norms.frag │ ├── comp_norms.vert │ └── compute_normals.cpp ├── species_assign │ ├── CMakeLists.txt │ ├── main.cpp │ └── main_single.cpp ├── sunlight_sim │ ├── CMakeLists.txt │ ├── Makefile │ ├── cmake_install.cmake │ ├── count_pixels.cu │ ├── count_pixels.h │ ├── main.cpp │ ├── quad.frag │ ├── quad.vert │ ├── sunlight.frag │ ├── sunlight.vert │ ├── sunsim.cpp │ ├── sunsim.h │ ├── terrain.cpp │ └── terrain.h ├── temp_compute │ ├── CMakeLists.txt │ └── main.cpp ├── tests │ ├── canopy_placement │ │ ├── CMakeLists.txt │ │ └── main.cpp │ ├── plot_txt │ │ └── CMakeLists.txt │ ├── specassign │ │ ├── CMakeLists.txt │ │ ├── main.cpp │ │ ├── main_draw_species.cpp │ │ └── main_smoothness.cpp │ └── sunlight_sim │ │ ├── CMakeLists.txt │ │ └── main.cpp ├── undersim │ ├── CMakeLists.txt │ └── main.cpp └── waterfill │ ├── CMakeLists.txt │ ├── Makefile │ ├── cmake_install.cmake │ ├── main │ ├── main.cpp │ ├── moisture.cpp │ ├── moisture.h │ ├── waterfill.cpp │ └── waterfill.h ├── gpusample ├── CMakeLists.txt └── src │ ├── cudatypes.h │ ├── gpusample.cu │ ├── gpusample.h │ ├── kmeans_assign.cu │ └── kmeans_assign.h ├── grass_sim_standalone ├── CMakeLists.txt ├── MapFloat.h ├── basic_types.h ├── data_importer.cpp ├── data_importer.h ├── grass_sim.cpp ├── grass_sim.h └── main.cpp ├── py_scripts ├── average_monthly_map.py ├── create_specratio_csv.py ├── create_sql_db.py ├── numpngw.py ├── pix2pix_server.py ├── plot_average.py ├── plot_elv.py ├── plot_elv_rgba.py ├── plot_pdb.py ├── read_pdb.py └── read_sqldb.py ├── species_optim ├── gpu_eval.cu ├── gpu_eval.h ├── species_assign_exp.cpp └── species_assign_exp.h └── tests ├── test_binary_readwrite ├── main.cpp └── main_read.cpp ├── test_hashmap ├── 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