├── .clang-format ├── .gitignore ├── .gitmodules ├── CMakeLists.txt ├── LICENSE ├── README.md ├── config ├── armadillo.json ├── armadillo_small.json ├── armadillo_small_bend_override.json ├── bar.json ├── bifur3.json ├── bifur3_bend_override.json ├── bob.json ├── bob_bend_override.json ├── bob_origface.json ├── cuboid_twist.json ├── cuboid_twist_baseline.json ├── human.json ├── human_bend_override.json ├── jet.json ├── model │ ├── Armadillo-small.1.ele │ ├── Armadillo-small.1.face │ ├── Armadillo-small.1.node │ ├── Armadillo.1.ele │ ├── Armadillo.1.face │ ├── Armadillo.1.node │ ├── beam3_tet.1.bou │ ├── beam3_tet.1.ele │ ├── beam3_tet.1.face │ ├── beam3_tet.1.node │ ├── bifur3.1.bou │ ├── bifur3.1.ele │ ├── bifur3.1.face │ ├── bifur3.1.node │ ├── bob_origface.1.ele │ ├── bob_origface.1.face │ ├── bob_origface.1.node │ ├── bob_origface.1.obj │ ├── bob_tri.1.ele │ ├── bob_tri.1.face │ ├── bob_tri.1.node │ ├── human.1.ele │ ├── human.1.face │ ├── human.1.node │ ├── jet.1.ele │ ├── jet.1.face │ ├── jet.1.node │ ├── jet.1.obj │ ├── plant16.1.bou │ ├── plant16.1.ele │ ├── plant16.1.face │ ├── plant16.1.node │ ├── single.ele │ ├── single.face │ └── single.node ├── override_arap.json ├── override_baseline.json ├── override_baseline_levmar.json ├── override_baseline_noproj.json ├── override_gravity.json ├── override_inverse.json ├── override_l2_penalty.json ├── override_neo_comp.json ├── override_neo_incomp.json ├── override_no_pade.json ├── override_order16.json ├── override_order20.json ├── override_save_interm.json ├── override_stiff_material.json ├── plant.json ├── plant_bend_override.json ├── sys-mt1.json ├── sys-mt16.json ├── sys-mt2.json ├── sys-mt32.json ├── sys-mt4.json ├── sys-mt8.json ├── sys-verbose-mt2.json ├── sys-verbose.json ├── sys.json ├── test_cuboid.json ├── test_simple_cuboid_twist.json ├── test_single_tet_inverse.json └── test_single_twist.json ├── fea ├── CMakeLists.txt ├── baseline │ ├── CMakeLists.txt │ ├── arap_material.cpp │ ├── arap_material.h │ ├── elastic_body.h │ ├── hcheck.cpp │ ├── hcheck.h │ ├── main.cpp │ ├── main.h │ ├── material.h │ ├── neohookean_material.cpp │ ├── neohookean_material.h │ ├── poly_mesh.cpp │ ├── poly_mesh.h │ ├── tet_elastic_body.cpp │ ├── tet_elastic_body.h │ ├── tet_mesh.h │ ├── typedefs.h │ ├── utils.cpp │ └── utils.h ├── main.cpp ├── material.cpp ├── material.h ├── mesh.cpp ├── mesh.h ├── mesh_template.h ├── tetrahedral_mesh.cpp ├── tetrahedral_mesh.h └── typedefs.h ├── libsanm ├── CMakeLists.txt ├── analytic_unary.cpp ├── analytic_unary.h ├── anm.cpp ├── anm.h ├── ano.cpp ├── ano.h ├── oprs.cpp ├── oprs.h ├── oprs │ ├── analytic_unary.cpp │ ├── analytic_unary.h │ ├── elem_arith.cpp │ ├── elem_arith.h │ ├── linalg.cpp │ ├── linalg.h │ ├── misc.cpp │ ├── misc.h │ ├── reduce.cpp │ └── reduce.h ├── pade.cpp ├── pade.h ├── sparse_solver.cpp ├── sparse_solver.h ├── stl.h ├── strio.h ├── symbolic.cpp ├── symbolic.h ├── tensor.cpp ├── tensor.h ├── tensor_elemwise.cpp ├── tensor_impl_helper.h ├── tensor_linalg.cpp ├── tensor_polymat.cpp ├── tensor_svd.cpp ├── tensor_svd.h ├── typedefs.h ├── unary_polynomial.cpp ├── unary_polynomial.h ├── utils.cpp └── utils.h ├── render ├── .gitignore ├── Makefile.cmp_with_baseline ├── Makefile.render ├── cmp_with_baseline.sh ├── configs │ ├── armadillo.json │ ├── bob.json │ ├── bob_diffuse.png │ ├── bob_origface.json │ ├── cuboid-twist-small.json │ ├── cuboid-twist.json │ ├── jet-rest.json │ ├── jet.json │ └── plant.json ├── fea_and_render.sh ├── gen_table_figs.py ├── make_vid.py ├── make_vid.sh ├── mesh_visual.py ├── render.sh ├── render_ondemand.sh ├── renormal.py ├── run_armadillo_exprs.sh ├── run_cmp_chen2014.sh └── vertical_auto_montage.sh ├── tests ├── CMakeLists.txt ├── ano.cpp ├── helper.cpp ├── helper.h ├── main.cpp ├── pade.cpp ├── symbolic.cpp └── tensor.cpp ├── third_party └── BRENT │ ├── README │ ├── brent.cpp │ └── brent.hpp └── utils ├── check_single_tet.py ├── fmt.sh ├── gnuplot.sh ├── plot_poly.py ├── 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