├── .github └── workflows │ ├── cache.yml │ ├── conventional-prs.yml │ ├── main.yml │ └── release-please.yml ├── .gitignore ├── .pre-commit-config.yaml ├── LICENSE ├── README.md ├── config ├── features.yml ├── params.yml └── samples.tsv ├── doc └── changelog.txt ├── profile └── default │ └── config.yml └── workflow ├── Snakefile └── rules ├── call.smk ├── call.yml ├── clean.smk ├── folders.smk ├── map.smk ├── map.yml ├── raw.smk └── raw.yml /.github/workflows/cache.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jlanga/smsk/HEAD/.github/workflows/cache.yml -------------------------------------------------------------------------------- /.github/workflows/conventional-prs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jlanga/smsk/HEAD/.github/workflows/conventional-prs.yml 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