├── README.md ├── data ├── __init__.py ├── csphd.csv ├── data_utils.py ├── disease_lp │ ├── disease_lp.edges.csv │ ├── disease_lp.feats.npz │ └── disease_lp.labels.npy ├── diseases.csv ├── download.py ├── generate_synthetic_densities.py ├── graph_datasets.py ├── image_reconstruction.py ├── phylo.csv ├── representation_dataset.py ├── synthetic.py └── vae_dataset.py ├── distributions ├── __init__.py ├── normal.py └── wrapped_normal.py ├── flows ├── __init__.py ├── flow_helpers.py └── flows.py ├── hyperflow_animation_large.gif ├── main.py ├── models ├── __init__.py ├── euclidean_vae.py ├── euclidean_vgae.py ├── hyperbolic_vae.py └── hyperbolic_vgae.py ├── plot_wrapped_normal.py ├── requirements.txt ├── scripts ├── hypertune │ ├── csphd │ │ ├── run_flow_sweep.sh │ │ ├── run_noflow_sweep.sh │ │ └── run_wrapped_sweep.sh │ ├── diseases │ │ ├── run_flow_sweep.sh │ │ ├── run_noflow_sweep.sh │ │ └── run_wrapped_sweep.sh │ ├── diseaseslp │ │ ├── run_flow_sweep.sh │ │ ├── run_noflow_sweep.sh │ │ └── run_wrapped_sweep.sh │ ├── phylo │ │ ├── run_flow_sweep.sh │ │ ├── run_noflow_sweep.sh │ │ └── run_wrapped_sweep.sh │ └── wordnet-mammal │ │ ├── run_flow_sweep.sh │ │ ├── run_noflow_sweep.sh │ │ └── run_wrapped_sweep.sh ├── run_bdp_alltangent_flow.sh ├── run_bdp_flow_sweep.sh ├── run_bdp_pt_flow_sweep.sh ├── run_bdp_tangent_flow_sweep.sh ├── run_bdp_vae_sweep.sh ├── run_bdp_wrapped_flow_sweep.sh ├── run_cora_flow_sweep.sh ├── run_cora_pt_flow_sweep.sh ├── run_cora_tangent_flow_sweep.sh ├── run_cora_vae_sweep.sh ├── run_cora_wrapped_flow_sweep.sh ├── run_csphd_flow_sweep.sh ├── run_csphd_vae_sweep.sh ├── run_csphd_wrapped_flow.sh ├── run_csphd_wrapped_flow_6_8.sh ├── run_diseaselp_flow_sweep.sh ├── run_diseaselp_pt_flow_sweep.sh ├── run_diseaselp_tangent_flow_sweep.sh ├── run_diseaselp_vae_sweep.sh ├── run_diseaselp_wrapped_flow_sweep.sh ├── run_diseases_flow_sweep.sh ├── run_diseases_vae_sweep.sh ├── run_diseases_wrapped_flow_sweep.sh ├── run_lobster.sh ├── run_mnist_alltangent_flow.sh ├── run_mnist_flow.sh ├── run_mnist_pt_flow_sweep.sh ├── run_mnist_tangent_flow.sh ├── run_mnist_vae_sweep.sh ├── run_mnist_wrapped_dim_flow_sweep.sh ├── run_mnist_wrapped_flow_sweep.sh ├── run_phylo_flow_sweep.sh ├── run_phylo_vae_sweep.sh ├── run_phylo_wrapped_flow.sh ├── run_prufer.sh ├── run_prufer_nc.sh ├── run_prufer_tc.sh ├── run_prufer_whc.sh ├── run_pubmed_euclidean_16_sweep.sh ├── run_pubmed_flow_sweep.sh ├── run_pubmed_hyperbolic_16_sweep.sh ├── run_pubmed_pt_flow_sweep.sh ├── run_pubmed_tangent_flow_sweep.sh ├── run_pubmed_vae_sweep.sh ├── run_pubmed_wrapped_flow_sweep.sh ├── run_wordnet_mammal_flow_sweep.sh ├── run_wordnet_mammal_noflow_sweep.sh ├── run_wordnet_mammal_wrapped_sweep.sh ├── run_wordnet_noun_flow_sweep.sh ├── run_wordnet_noun_noflow_sweep.sh ├── run_wordnet_noun_wrapped_sweep.sh └── test │ ├── csphd │ ├── test_euc_vs_hyp.sh │ ├── test_flows.sh │ └── test_wrapped.sh │ ├── diseases │ ├── test_euc_vs_hyp.sh │ └── test_flows.sh │ └── 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