├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ └── R-CMD-check.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── NEWS ├── R ├── app.R ├── applications.R ├── calibrate.R ├── example.R ├── import.R ├── interactive.R ├── shiny-server.R ├── shiny-ui.R ├── shiny-widget.R ├── utils.R └── zzz.R ├── README.md ├── _pkgdown.yml ├── data ├── datalist └── rand_mat.rda ├── docs ├── 404.html ├── LICENSE-text.html ├── articles │ ├── InteractiveComplexHeatmap.html │ ├── InteractiveComplexHeatmap_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── InteractiveComplexHeatmap_intro.html │ ├── decoration.html │ ├── decoration_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── deseq2_app.html │ ├── deseq2_app_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── from_scratch.html │ ├── from_scratch_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── implementation.html │ ├── implementation_files │ │ ├── figure-html │ │ │ ├── unnamed-chunk-10-1.png │ │ │ ├── unnamed-chunk-13-1.png │ │ │ ├── unnamed-chunk-3-1.png │ │ │ ├── unnamed-chunk-5-1.png │ │ │ └── unnamed-chunk-7-1.png │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── index.html │ ├── interactivate_indirect.html │ ├── interactivate_indirect_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── jquery.min.js │ ├── jquery.sticky.js │ ├── share.html │ ├── share_files │ │ └── header-attrs-2.9 │ │ │ └── header-attrs.js │ ├── shiny_dev.html │ └── shiny_dev_files │ │ └── header-attrs-2.9 │ │ └── header-attrs.js ├── authors.html ├── bootstrap-toc.css ├── bootstrap-toc.js ├── docsearch.css ├── docsearch.js ├── index.html ├── link.svg ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml ├── reference │ ├── HeatmapInfoOutput.html │ ├── InteractiveComplexHeatmapModal.html │ ├── InteractiveComplexHeatmapOutput.html │ ├── InteractiveComplexHeatmapWidget.html │ ├── Rplot001.png │ ├── all_column_indices.html │ ├── all_row_indices.html │ ├── getPositionFromBrush.html │ ├── getPositionFromClick.html │ ├── getPositionFromDblclick.html │ ├── getPositionFromHover.html │ ├── htPositionsOnDevice.html │ ├── htShiny.html │ ├── htShinyExample.html │ ├── ht_shiny.html │ ├── index.html │ ├── interactivate.DESeqDataSet.html │ ├── interactivate.html │ ├── interactivate.kde.html │ ├── interactivateDensity2D.html │ ├── is_in_sub_heatmap.html │ ├── makeInteractiveComplexHeatmap.html │ ├── originalHeatmapOutput.html │ ├── rand_mat.html │ ├── record_observation.html │ ├── selectArea.html │ ├── selectPosition.html │ └── subHeatmapOutput.html └── sitemap.xml ├── inst ├── CITATION ├── examples │ ├── 01.example-simple.R │ ├── 02.example-other-plots.R │ ├── 03.example-enriched-heatmaps.R │ ├── 04.example-public-datasets.R │ ├── 05.example-shiny.R │ ├── 06.example-shiny-dynamic.R │ ├── 07.example-rmarkdown.R │ ├── 08.example-indirect.R │ ├── 09.example-output-float.R │ ├── 10.example-shinydashboard.R │ ├── rmarkdown-dynamic.Rmd │ └── rmarkdown.Rmd ├── extdata │ └── 2d_density_xy.rds ├── template │ ├── ht-main.css │ ├── ht-main.js │ ├── ht-output.css │ ├── ht-output.js │ ├── ht-sub.css │ └── ht-sub.js └── www │ ├── classic.min.css │ ├── clipboard.min.js │ ├── foo.js │ ├── monolith.min.css │ ├── mousestop.min.js │ ├── nano.min.css │ ├── pickr.es5.min.js │ └── pickr.min.js ├── man ├── HeatmapInfoOutput.Rd ├── InteractiveComplexHeatmapModal.Rd ├── InteractiveComplexHeatmapOutput.Rd ├── InteractiveComplexHeatmapWidget.Rd ├── all_column_indices.Rd ├── all_row_indices.Rd ├── getPositionFromBrush.Rd ├── getPositionFromClick.Rd ├── getPositionFromDblclick.Rd ├── getPositionFromHover.Rd ├── htPositionsOnDevice.Rd ├── htShiny.Rd ├── htShinyExample.Rd ├── ht_shiny.Rd ├── interactivate.DESeqDataSet.Rd ├── interactivate.Rd ├── interactivate.kde.Rd ├── interactivateDensity2D.Rd ├── is_in_sub_heatmap.Rd ├── makeInteractiveComplexHeatmap.Rd ├── originalHeatmapOutput.Rd ├── rand_mat.Rd ├── record_observation.Rd ├── selectArea.Rd ├── selectPosition.Rd └── subHeatmapOutput.Rd ├── tests ├── test-all.R └── testthat │ └── test-position.R └── vignettes ├── InteractiveComplexHeatmap.Rmd ├── InteractiveComplexHeatmap_intro.Rmd ├── decoration.Rmd ├── deseq2_app.Rmd ├── from_scratch.Rmd ├── implementation.Rmd ├── interactivate_indirect.Rmd ├── jquery.min.js ├── jquery.sticky.js ├── model.R ├── share.Rmd └── shiny_dev.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/.github/workflows/R-CMD-check.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/LICENSE -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/NEWS -------------------------------------------------------------------------------- /R/app.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/app.R -------------------------------------------------------------------------------- /R/applications.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/applications.R -------------------------------------------------------------------------------- /R/calibrate.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/calibrate.R -------------------------------------------------------------------------------- /R/example.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/example.R -------------------------------------------------------------------------------- /R/import.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/import.R -------------------------------------------------------------------------------- /R/interactive.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/interactive.R -------------------------------------------------------------------------------- /R/shiny-server.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/shiny-server.R -------------------------------------------------------------------------------- /R/shiny-ui.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/shiny-ui.R -------------------------------------------------------------------------------- /R/shiny-widget.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/shiny-widget.R -------------------------------------------------------------------------------- /R/utils.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/utils.R -------------------------------------------------------------------------------- /R/zzz.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/R/zzz.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/README.md -------------------------------------------------------------------------------- /_pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/_pkgdown.yml -------------------------------------------------------------------------------- /data/datalist: -------------------------------------------------------------------------------- 1 | rand_mat 2 | -------------------------------------------------------------------------------- /data/rand_mat.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/data/rand_mat.rda -------------------------------------------------------------------------------- /docs/404.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/404.html -------------------------------------------------------------------------------- /docs/LICENSE-text.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/LICENSE-text.html -------------------------------------------------------------------------------- /docs/articles/InteractiveComplexHeatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/InteractiveComplexHeatmap.html -------------------------------------------------------------------------------- /docs/articles/InteractiveComplexHeatmap_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/InteractiveComplexHeatmap_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/InteractiveComplexHeatmap_intro.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/InteractiveComplexHeatmap_intro.html -------------------------------------------------------------------------------- /docs/articles/decoration.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/decoration.html -------------------------------------------------------------------------------- /docs/articles/decoration_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/decoration_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/deseq2_app.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/deseq2_app.html -------------------------------------------------------------------------------- /docs/articles/deseq2_app_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/deseq2_app_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/from_scratch.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/from_scratch.html -------------------------------------------------------------------------------- /docs/articles/from_scratch_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/from_scratch_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/implementation.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation.html -------------------------------------------------------------------------------- /docs/articles/implementation_files/figure-html/unnamed-chunk-10-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/figure-html/unnamed-chunk-10-1.png -------------------------------------------------------------------------------- /docs/articles/implementation_files/figure-html/unnamed-chunk-13-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/figure-html/unnamed-chunk-13-1.png -------------------------------------------------------------------------------- /docs/articles/implementation_files/figure-html/unnamed-chunk-3-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/figure-html/unnamed-chunk-3-1.png -------------------------------------------------------------------------------- /docs/articles/implementation_files/figure-html/unnamed-chunk-5-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/figure-html/unnamed-chunk-5-1.png -------------------------------------------------------------------------------- /docs/articles/implementation_files/figure-html/unnamed-chunk-7-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/figure-html/unnamed-chunk-7-1.png -------------------------------------------------------------------------------- /docs/articles/implementation_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/implementation_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/index.html -------------------------------------------------------------------------------- /docs/articles/interactivate_indirect.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/interactivate_indirect.html -------------------------------------------------------------------------------- /docs/articles/interactivate_indirect_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/interactivate_indirect_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/jquery.sticky.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/jquery.sticky.js -------------------------------------------------------------------------------- /docs/articles/share.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/share.html -------------------------------------------------------------------------------- /docs/articles/share_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/share_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/shiny_dev.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/shiny_dev.html -------------------------------------------------------------------------------- /docs/articles/shiny_dev_files/header-attrs-2.9/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/articles/shiny_dev_files/header-attrs-2.9/header-attrs.js -------------------------------------------------------------------------------- /docs/authors.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/authors.html -------------------------------------------------------------------------------- /docs/bootstrap-toc.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/bootstrap-toc.css -------------------------------------------------------------------------------- /docs/bootstrap-toc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/bootstrap-toc.js -------------------------------------------------------------------------------- /docs/docsearch.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/docsearch.css -------------------------------------------------------------------------------- /docs/docsearch.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/docsearch.js -------------------------------------------------------------------------------- /docs/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/index.html -------------------------------------------------------------------------------- /docs/link.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/link.svg -------------------------------------------------------------------------------- /docs/pkgdown.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/pkgdown.css -------------------------------------------------------------------------------- /docs/pkgdown.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/pkgdown.js -------------------------------------------------------------------------------- /docs/pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/pkgdown.yml -------------------------------------------------------------------------------- /docs/reference/HeatmapInfoOutput.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/HeatmapInfoOutput.html -------------------------------------------------------------------------------- /docs/reference/InteractiveComplexHeatmapModal.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/InteractiveComplexHeatmapModal.html -------------------------------------------------------------------------------- /docs/reference/InteractiveComplexHeatmapOutput.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/InteractiveComplexHeatmapOutput.html -------------------------------------------------------------------------------- /docs/reference/InteractiveComplexHeatmapWidget.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/InteractiveComplexHeatmapWidget.html -------------------------------------------------------------------------------- /docs/reference/Rplot001.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/Rplot001.png -------------------------------------------------------------------------------- /docs/reference/all_column_indices.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/all_column_indices.html -------------------------------------------------------------------------------- /docs/reference/all_row_indices.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/all_row_indices.html -------------------------------------------------------------------------------- /docs/reference/getPositionFromBrush.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/getPositionFromBrush.html -------------------------------------------------------------------------------- /docs/reference/getPositionFromClick.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/getPositionFromClick.html -------------------------------------------------------------------------------- /docs/reference/getPositionFromDblclick.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/getPositionFromDblclick.html -------------------------------------------------------------------------------- /docs/reference/getPositionFromHover.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/getPositionFromHover.html -------------------------------------------------------------------------------- /docs/reference/htPositionsOnDevice.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/htPositionsOnDevice.html -------------------------------------------------------------------------------- /docs/reference/htShiny.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/htShiny.html -------------------------------------------------------------------------------- /docs/reference/htShinyExample.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/htShinyExample.html -------------------------------------------------------------------------------- /docs/reference/ht_shiny.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/ht_shiny.html -------------------------------------------------------------------------------- /docs/reference/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/index.html -------------------------------------------------------------------------------- /docs/reference/interactivate.DESeqDataSet.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/interactivate.DESeqDataSet.html -------------------------------------------------------------------------------- /docs/reference/interactivate.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/interactivate.html -------------------------------------------------------------------------------- /docs/reference/interactivate.kde.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/interactivate.kde.html -------------------------------------------------------------------------------- /docs/reference/interactivateDensity2D.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/interactivateDensity2D.html -------------------------------------------------------------------------------- /docs/reference/is_in_sub_heatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/is_in_sub_heatmap.html -------------------------------------------------------------------------------- /docs/reference/makeInteractiveComplexHeatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/makeInteractiveComplexHeatmap.html -------------------------------------------------------------------------------- /docs/reference/originalHeatmapOutput.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/originalHeatmapOutput.html -------------------------------------------------------------------------------- /docs/reference/rand_mat.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/rand_mat.html -------------------------------------------------------------------------------- /docs/reference/record_observation.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/record_observation.html -------------------------------------------------------------------------------- /docs/reference/selectArea.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/selectArea.html -------------------------------------------------------------------------------- /docs/reference/selectPosition.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/selectPosition.html -------------------------------------------------------------------------------- /docs/reference/subHeatmapOutput.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/reference/subHeatmapOutput.html -------------------------------------------------------------------------------- /docs/sitemap.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/docs/sitemap.xml -------------------------------------------------------------------------------- /inst/CITATION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/CITATION -------------------------------------------------------------------------------- /inst/examples/01.example-simple.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/01.example-simple.R -------------------------------------------------------------------------------- /inst/examples/02.example-other-plots.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/02.example-other-plots.R -------------------------------------------------------------------------------- /inst/examples/03.example-enriched-heatmaps.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/03.example-enriched-heatmaps.R -------------------------------------------------------------------------------- /inst/examples/04.example-public-datasets.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/04.example-public-datasets.R -------------------------------------------------------------------------------- /inst/examples/05.example-shiny.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/05.example-shiny.R -------------------------------------------------------------------------------- /inst/examples/06.example-shiny-dynamic.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/06.example-shiny-dynamic.R -------------------------------------------------------------------------------- /inst/examples/07.example-rmarkdown.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/07.example-rmarkdown.R -------------------------------------------------------------------------------- /inst/examples/08.example-indirect.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/08.example-indirect.R -------------------------------------------------------------------------------- /inst/examples/09.example-output-float.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/09.example-output-float.R -------------------------------------------------------------------------------- /inst/examples/10.example-shinydashboard.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/10.example-shinydashboard.R -------------------------------------------------------------------------------- /inst/examples/rmarkdown-dynamic.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/rmarkdown-dynamic.Rmd -------------------------------------------------------------------------------- /inst/examples/rmarkdown.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/examples/rmarkdown.Rmd -------------------------------------------------------------------------------- /inst/extdata/2d_density_xy.rds: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/extdata/2d_density_xy.rds -------------------------------------------------------------------------------- /inst/template/ht-main.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-main.css -------------------------------------------------------------------------------- /inst/template/ht-main.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-main.js -------------------------------------------------------------------------------- /inst/template/ht-output.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-output.css -------------------------------------------------------------------------------- /inst/template/ht-output.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-output.js -------------------------------------------------------------------------------- /inst/template/ht-sub.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-sub.css -------------------------------------------------------------------------------- /inst/template/ht-sub.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/template/ht-sub.js -------------------------------------------------------------------------------- /inst/www/classic.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/classic.min.css -------------------------------------------------------------------------------- /inst/www/clipboard.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/clipboard.min.js -------------------------------------------------------------------------------- /inst/www/foo.js: -------------------------------------------------------------------------------- 1 | 1; 2 | -------------------------------------------------------------------------------- /inst/www/monolith.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/monolith.min.css -------------------------------------------------------------------------------- /inst/www/mousestop.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/mousestop.min.js -------------------------------------------------------------------------------- /inst/www/nano.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/nano.min.css -------------------------------------------------------------------------------- /inst/www/pickr.es5.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/pickr.es5.min.js -------------------------------------------------------------------------------- /inst/www/pickr.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/inst/www/pickr.min.js -------------------------------------------------------------------------------- /man/HeatmapInfoOutput.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/HeatmapInfoOutput.Rd -------------------------------------------------------------------------------- /man/InteractiveComplexHeatmapModal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/InteractiveComplexHeatmapModal.Rd -------------------------------------------------------------------------------- /man/InteractiveComplexHeatmapOutput.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/InteractiveComplexHeatmapOutput.Rd -------------------------------------------------------------------------------- /man/InteractiveComplexHeatmapWidget.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/InteractiveComplexHeatmapWidget.Rd -------------------------------------------------------------------------------- /man/all_column_indices.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/all_column_indices.Rd -------------------------------------------------------------------------------- /man/all_row_indices.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/all_row_indices.Rd -------------------------------------------------------------------------------- /man/getPositionFromBrush.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/getPositionFromBrush.Rd -------------------------------------------------------------------------------- /man/getPositionFromClick.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/getPositionFromClick.Rd -------------------------------------------------------------------------------- /man/getPositionFromDblclick.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/getPositionFromDblclick.Rd -------------------------------------------------------------------------------- /man/getPositionFromHover.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/getPositionFromHover.Rd -------------------------------------------------------------------------------- /man/htPositionsOnDevice.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/htPositionsOnDevice.Rd -------------------------------------------------------------------------------- /man/htShiny.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/htShiny.Rd -------------------------------------------------------------------------------- /man/htShinyExample.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/htShinyExample.Rd -------------------------------------------------------------------------------- /man/ht_shiny.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/ht_shiny.Rd -------------------------------------------------------------------------------- /man/interactivate.DESeqDataSet.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/interactivate.DESeqDataSet.Rd -------------------------------------------------------------------------------- /man/interactivate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/interactivate.Rd -------------------------------------------------------------------------------- /man/interactivate.kde.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/interactivate.kde.Rd -------------------------------------------------------------------------------- /man/interactivateDensity2D.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/interactivateDensity2D.Rd -------------------------------------------------------------------------------- /man/is_in_sub_heatmap.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/is_in_sub_heatmap.Rd -------------------------------------------------------------------------------- /man/makeInteractiveComplexHeatmap.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/makeInteractiveComplexHeatmap.Rd -------------------------------------------------------------------------------- /man/originalHeatmapOutput.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/originalHeatmapOutput.Rd -------------------------------------------------------------------------------- /man/rand_mat.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/rand_mat.Rd -------------------------------------------------------------------------------- /man/record_observation.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/record_observation.Rd -------------------------------------------------------------------------------- /man/selectArea.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/selectArea.Rd -------------------------------------------------------------------------------- /man/selectPosition.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/selectPosition.Rd -------------------------------------------------------------------------------- /man/subHeatmapOutput.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/man/subHeatmapOutput.Rd -------------------------------------------------------------------------------- /tests/test-all.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/tests/test-all.R -------------------------------------------------------------------------------- /tests/testthat/test-position.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/tests/testthat/test-position.R -------------------------------------------------------------------------------- /vignettes/InteractiveComplexHeatmap.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/InteractiveComplexHeatmap.Rmd -------------------------------------------------------------------------------- /vignettes/InteractiveComplexHeatmap_intro.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/InteractiveComplexHeatmap_intro.Rmd -------------------------------------------------------------------------------- /vignettes/decoration.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/decoration.Rmd -------------------------------------------------------------------------------- /vignettes/deseq2_app.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/deseq2_app.Rmd -------------------------------------------------------------------------------- /vignettes/from_scratch.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/from_scratch.Rmd -------------------------------------------------------------------------------- /vignettes/implementation.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/implementation.Rmd -------------------------------------------------------------------------------- /vignettes/interactivate_indirect.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/interactivate_indirect.Rmd -------------------------------------------------------------------------------- /vignettes/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/jquery.min.js -------------------------------------------------------------------------------- /vignettes/jquery.sticky.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/jquery.sticky.js -------------------------------------------------------------------------------- /vignettes/model.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/model.R -------------------------------------------------------------------------------- /vignettes/share.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/share.Rmd -------------------------------------------------------------------------------- /vignettes/shiny_dev.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/jokergoo/InteractiveComplexHeatmap/HEAD/vignettes/shiny_dev.Rmd --------------------------------------------------------------------------------