├── .gitattributes ├── .gitignore ├── CHANGELOG.rst ├── LICENSE ├── PCGA_parameters_06212018.docx ├── README.md ├── examples ├── ERT_E4D │ ├── README.md │ ├── elexyz.npy │ ├── ert.py │ ├── input_files │ │ ├── agu.1.ele │ │ ├── agu.1.face │ │ ├── agu.1.node │ │ ├── agu.out │ │ ├── agu.sig │ │ ├── agu.srv │ │ ├── agu.srv_big │ │ ├── agu.srv_old │ │ ├── agu.trn │ │ ├── e4d.inp │ │ └── readme │ ├── inv_ert.py │ ├── obs.txt │ ├── xyz.npy │ ├── xyzout.npy │ └── xyzoutval.txt ├── adh_Savannah │ ├── adh.py │ ├── bathymetry_true.png │ ├── inv_adh_savannah.ipynb │ ├── meshnode.txt │ ├── obs.txt │ ├── pcga_wrapper.py │ ├── run_adh.py │ ├── setup_savannah.py │ ├── triangles.txt │ └── true.txt ├── fenics_hydromechanics │ ├── README.md │ ├── data │ │ ├── biot_2mat.xml │ │ ├── biot_2mat_facet_region.xml │ │ └── biot_2mat_physical_region.xml │ ├── dof_perm_dg0.csv │ ├── example_inv_fenics.py │ ├── gen_logk_idx.py │ ├── het_9999.csv │ ├── het_structure.csv │ ├── logk_idx.txt │ ├── obs.txt │ ├── obs_true.txt │ ├── plot_results.py │ ├── poro.py │ └── s_true.txt ├── mare2dem_MT │ ├── input_files │ │ ├── MARE2DEM │ │ ├── fwd_model.0.resistivity_head │ │ ├── fwd_model.0.resistivity_old │ │ ├── fwd_model.0.resp_old │ │ ├── fwd_model.emdata │ │ ├── fwd_model.mamba2d │ │ ├── fwd_model.penalty │ │ ├── fwd_model.poly │ │ ├── fwd_model.poly_head │ │ └── mare2dem.settings │ ├── inv_MT_example.py │ ├── inversion_mare2dem.ipynb │ ├── mare2dem.py │ ├── obs.txt │ └── true_100x100.txt ├── modflow_flopy │ ├── example_inv_mf.py │ ├── input_files │ │ ├── mf2005 │ │ ├── mf2005.exe │ │ ├── mf2005_mac │ │ ├── mf2005dbl │ │ ├── mf2005dbl.exe │ │ └── mf2005dbl_mac │ ├── inversion_modflow.ipynb │ ├── mf.py │ ├── obs.txt │ └── true_logK.txt ├── pumping_history_identification │ ├── H.mat │ ├── drawdown.py │ ├── example_linear_inversion.py │ ├── example_nonlinear_inversion.py │ ├── linear_inverse_problem_pumping_history_identification.ipynb │ ├── nonlinear_inverse_problem_pumping_history_identification.ipynb │ ├── obs.txt │ └── true.txt ├── stwave_duck │ ├── example_inv_stwave.py │ ├── input_files │ │ ├── 8m-array_2015100718_2015100722.nc │ │ └── stwave │ ├── inversion_stwave.ipynb │ ├── obs.txt │ ├── stwave.py │ └── true_depth.txt ├── tough_heat │ ├── README.md │ ├── inv_tough_joint.py │ ├── joint_inversion_example_tough.ipynb │ ├── obs.txt │ ├── tough.py │ └── true_30_10_10_gau.txt └── tracer_tomography_ade_crunch │ ├── cobs.txt │ ├── crunch.py │ ├── input_files │ ├── 2DCr.in │ ├── 2DCra.in │ ├── CrunchTope │ ├── OldRifleDatabase_Cr.dbs │ └── aqueous.dbs │ ├── inv_crunch_example.py │ ├── inversion_example_advection_diffusion_crunchtope.ipynb │ ├── obs.txt │ └── true.txt ├── makefile ├── pyPCGA ├── __about__.py ├── __init__.py ├── covariance │ ├── __init__.py │ ├── dense.py │ ├── mat.py │ └── toeplitz.py └── pcga.py └── setup.py /.gitattributes: -------------------------------------------------------------------------------- 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