├── .DS_Store ├── .gitignore ├── Bayesian-causal-inference.Rproj ├── Case_study_1 ├── .DS_Store ├── Case-Study01_Model-Based_Inference_for_RCT.Rmd ├── Case-Study01_Model-Based_Inference_for_RCT.html ├── Case-Study01_Model-Based_Inference_for_RCT_cache │ └── html │ │ ├── __packages │ │ ├── unnamed-chunk-12_6aeb65a555e71a66f2f0e57c7e29e58f.RData │ │ ├── unnamed-chunk-12_6aeb65a555e71a66f2f0e57c7e29e58f.rdb │ │ ├── unnamed-chunk-12_6aeb65a555e71a66f2f0e57c7e29e58f.rdx │ │ ├── unnamed-chunk-3_c398ad924877496b1da03e932f015646.RData │ │ ├── unnamed-chunk-3_c398ad924877496b1da03e932f015646.rdb │ │ ├── unnamed-chunk-3_c398ad924877496b1da03e932f015646.rdx │ │ ├── unnamed-chunk-9_9407668c8927d7b67bbbdc6bcb5adb57.RData │ │ ├── unnamed-chunk-9_9407668c8927d7b67bbbdc6bcb5adb57.rdb │ │ └── unnamed-chunk-9_9407668c8927d7b67bbbdc6bcb5adb57.rdx ├── Case-Study01_Model-Based_Inference_for_RCT_files │ └── figure-html │ │ ├── unnamed-chunk-11-1.png │ │ ├── unnamed-chunk-13-1.png │ │ ├── unnamed-chunk-17-1.png │ │ ├── unnamed-chunk-5-1.png │ │ ├── unnamed-chunk-6-1.png │ │ └── unnamed-chunk-8-1.png ├── Model_01_Assuming_Independent_Potential_Outcomes.rds ├── Model_01_Assuming_Independent_Potential_Outcomes.stan ├── Model_02_Assuming_Constant_Treatment_Effects.rds ├── Model_02_Assuming_Constant_Treatment_Effects.stan ├── Model_03_Independent_Potential_Outcomes_With_Covariates.rds ├── Model_03_Independent_Potential_Outcomes_With_Covariates.stan ├── Model_04_Independent_Potential_Outcomes_with_Covariates-Two-Part Model.stan ├── bibliography.bib ├── simulated_example.rds ├── simulated_example.stan └── styles.css ├── Case_study_2 ├── .DS_Store ├── _publish.yml ├── case_study_02_IV_one-sided.html ├── case_study_02_IV_one-sided.qmd ├── case_study_02_IV_one-sided_cache │ └── html │ │ ├── __packages │ │ ├── unnamed-chunk-3_1428a8a7ac1a5d2aeeb41f5182e1f0a2.RData │ │ ├── unnamed-chunk-3_1428a8a7ac1a5d2aeeb41f5182e1f0a2.rdb │ │ ├── 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Noncompliance_02_Unkind.Rmd ├── Case-Study02_IV Analysis of RCT with One-sided Noncompliance_03_Unkind_Brief.Rmd ├── Case-Study02_IV-Analysis-of-RCT-with-One-sided-Noncompliance_02_Unkind.html ├── Case-Study02_IV-Analysis-of-RCT-with-One-sided-Noncompliance_03_Unkind_Brief.Rmd ├── Case-Study02_IV-Analysis-of-RCT-with-One-sided-Noncompliance_03_Unkind_Brief.html ├── Case-Study02_IV-Analysis-of-RCT-with-One-sided-Noncompliance_03_Unkind_Brief_cache │ └── html │ │ ├── __packages │ │ ├── unnamed-chunk-2_cd57390594e799dd53ee45d203aa06ca.RData │ │ ├── unnamed-chunk-2_cd57390594e799dd53ee45d203aa06ca.rdb │ │ ├── unnamed-chunk-2_cd57390594e799dd53ee45d203aa06ca.rdx │ │ ├── unnamed-chunk-5_30966ffee19aa92445824582454af549.RData │ │ ├── unnamed-chunk-5_30966ffee19aa92445824582454af549.rdb │ │ └── unnamed-chunk-5_30966ffee19aa92445824582454af549.rdx ├── Case-Study02_IV-Analysis-of-RCT-with-One-sided-Noncompliance_03_Unkind_Brief_files │ └── figure-html │ │ ├── unnamed-chunk-4-1.png │ │ ├── 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