├── .DS_Store ├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ └── test-coverage.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── LDA_gibbs_functions.R ├── LDA_gibbs_sampler.R ├── LDA_helper_functions.R ├── RcppExports.R ├── bayesmove-package.R ├── mixmod_gibbs_functions.R ├── mixmod_gibbs_sampler.R ├── segmentation_gibbs_functions.R ├── segmentation_gibbs_sampler.R ├── segmentation_helper_functions.R ├── shinyapp.R ├── tracks.R ├── tracks.list.R ├── tracks.seg.R ├── utils-pipe.R └── zzz.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── bayesmove.Rproj ├── codecov.yml ├── cran-comments.md ├── data ├── tracks.list.rda ├── tracks.rda └── tracks.seg.rda ├── docs ├── .DS_Store ├── 404.html ├── LICENSE.html ├── apple-touch-icon-120x120.png ├── apple-touch-icon-152x152.png ├── apple-touch-icon-180x180.png ├── apple-touch-icon-60x60.png ├── apple-touch-icon-76x76.png ├── apple-touch-icon.png ├── articles │ ├── .DS_Store │ ├── Cluster-observations.html │ ├── Cluster-observations_files │ │ ├── accessible-code-block-0.0.1 │ │ │ └── empty-anchor.js │ │ ├── figure-html │ │ │ ├── bin_data-1.png │ │ │ ├── bin_data-2.png │ │ │ ├── load data-1.png │ │ │ ├── load_data-1.png │ │ │ ├── plot_distribs-1.png │ │ │ ├── prep data-1.png │ │ │ ├── prep data-2.png │ │ │ ├── run model-1.png │ │ │ ├── run_model-1.png │ │ │ ├── unnamed-chunk-3-1.png │ │ │ ├── unnamed-chunk-3-2.png │ │ │ ├── unnamed-chunk-3-3.png │ │ │ ├── unnamed-chunk-4-1.png │ │ │ ├── viz_distribs-1.png │ │ │ └── viz_distribs-2.png │ │ ├── header-attrs-2.10 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ └── header-attrs-2.6 │ │ │ └── header-attrs.js │ ├── Cluster-track-segments.html │ ├── Cluster-track-segments_files │ │ ├── .DS_Store │ │ ├── accessible-code-block-0.0.1 │ │ │ └── empty-anchor.js │ │ ├── figure-html │ │ │ ├── .DS_Store │ │ │ ├── expand-behav-1.png │ │ │ ├── map-behav-1.png │ │ │ ├── map-separate-behavs-1.png │ │ │ ├── map-separate-behavs-2.png │ │ │ ├── map-separate-behavs-3.png │ │ │ ├── map-separate-behavs-4.png │ │ │ ├── map-separate-behavs-5.png │ │ │ ├── plot-distribs-1.png │ │ │ ├── plot-theta-1.png │ │ │ └── traceplot-1.png │ │ ├── header-attrs-2.10 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ └── header-attrs-2.6 │ │ │ └── header-attrs.js │ ├── Exploratory-analysis-in-Shiny.html │ ├── Exploratory-analysis-in-Shiny_files │ │ ├── accessible-code-block-0.0.1 │ │ │ └── empty-anchor.js │ │ ├── bootstrap-3.3.5 │ │ │ ├── css │ │ │ │ ├── bootstrap-theme.css │ │ │ │ ├── bootstrap-theme.css.map │ │ │ │ ├── bootstrap-theme.min.css │ │ │ │ ├── bootstrap.css │ │ │ │ ├── bootstrap.css.map │ │ │ │ ├── bootstrap.min.css │ │ │ │ ├── cerulean.min.css │ │ │ │ ├── cosmo.min.css │ │ │ │ ├── darkly.min.css │ │ │ │ ├── flatly.min.css │ │ │ │ ├── fonts │ │ │ │ │ ├── Lato.ttf │ │ │ │ │ ├── LatoBold.ttf │ │ │ │ │ ├── LatoItalic.ttf │ │ │ │ │ ├── NewsCycle.ttf │ │ │ │ │ ├── NewsCycleBold.ttf │ │ │ │ │ ├── OpenSans.ttf │ │ │ │ │ ├── OpenSansBold.ttf │ │ │ │ │ ├── OpenSansBoldItalic.ttf │ │ │ │ │ ├── OpenSansItalic.ttf │ │ │ │ │ ├── OpenSansLight.ttf │ │ │ │ │ ├── OpenSansLightItalic.ttf │ │ │ │ │ ├── Raleway.ttf │ │ │ │ │ ├── RalewayBold.ttf │ │ │ │ │ ├── Roboto.ttf │ │ │ │ │ ├── RobotoBold.ttf │ │ │ │ │ ├── RobotoLight.ttf │ │ │ │ │ ├── RobotoMedium.ttf │ │ │ │ │ ├── SourceSansPro.ttf │ │ │ │ │ ├── SourceSansProBold.ttf │ │ │ │ │ ├── SourceSansProItalic.ttf │ │ │ │ │ ├── SourceSansProLight.ttf │ │ │ │ │ └── Ubuntu.ttf │ │ │ │ ├── journal.min.css │ │ │ │ ├── lumen.min.css │ │ │ │ ├── paper.min.css │ │ │ │ ├── readable.min.css │ │ │ │ ├── sandstone.min.css │ │ │ │ ├── simplex.min.css │ │ │ │ ├── spacelab.min.css │ │ │ │ ├── united.min.css │ │ │ │ └── yeti.min.css │ │ │ ├── fonts │ │ │ │ ├── glyphicons-halflings-regular.eot │ │ │ │ ├── glyphicons-halflings-regular.svg │ │ │ │ ├── glyphicons-halflings-regular.ttf │ │ │ │ ├── glyphicons-halflings-regular.woff │ │ │ │ └── glyphicons-halflings-regular.woff2 │ │ │ ├── js │ │ │ │ ├── bootstrap.js │ │ │ │ ├── bootstrap.min.js │ │ │ │ └── npm.js │ │ │ └── shim │ │ │ │ ├── html5shiv.min.js │ │ │ │ └── respond.min.js │ │ ├── figure-html │ │ │ ├── load data-1.png │ │ │ └── load-1.png │ │ ├── header-attrs-2.10 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.6 │ │ │ └── header-attrs.js │ │ ├── jquery-1.11.3 │ │ │ └── jquery.min.js │ │ └── navigation-1.1 │ │ │ ├── codefolding.js │ │ │ ├── sourceembed.js │ │ │ └── tabsets.js │ ├── Pre-specify_brkpts_and_zero-inflated_data.html │ ├── Pre-specify_brkpts_and_zero-inflated_data_files │ │ ├── figure-html │ │ │ ├── assign-states-1.png │ │ │ ├── assign-states-2.png │ │ │ ├── map-state-props-1.png │ │ │ ├── map-state-props-2.png │ │ │ ├── map-state-props-3.png │ │ │ ├── phi-extract-1.png │ │ │ ├── plot-brks-1.png │ │ │ ├── plot-brks-2.png │ │ │ ├── plot-brks-3.png │ │ │ ├── plot-tracks-1.png │ │ │ ├── theta-estim-long-1.png │ │ │ ├── theta-extract-1.png │ │ │ ├── traceplot-cluster-1.png │ │ │ ├── traceplot-segment-1.png │ │ │ └── traceplot-segment-2.png │ │ └── header-attrs-2.11 │ │ │ └── header-attrs.js │ ├── Prepare-data-for-analysis.html │ ├── Prepare-data-for-analysis_files │ │ ├── .DS_Store │ │ ├── accessible-code-block-0.0.1 │ │ │ └── empty-anchor.js │ │ ├── figure-html │ │ │ ├── cont-distribs-1.png │ │ │ ├── cont-distribs-2.png │ │ │ ├── distrib-lims-SL-1.png │ │ │ ├── distrib-lims-SL-2.png │ │ │ ├── distrib-lims-TA-1.png │ │ │ ├── distrib-lims-TA-2.png │ │ │ ├── hist-1.png │ │ │ ├── plot tracks-1.png │ │ │ ├── plot-tracks-1.png │ │ │ ├── round times-1.png │ │ │ ├── round-times-1.png │ │ │ ├── unnamed-chunk-2-1.png │ │ │ ├── unnamed-chunk-3-1.png │ │ │ ├── unnamed-chunk-3-2.png │ │ │ ├── unnamed-chunk-4-1.png │ │ │ ├── unnamed-chunk-4-2.png │ │ │ ├── unnamed-chunk-5-1.png │ │ │ └── unnamed-chunk-5-2.png │ │ ├── header-attrs-2.10 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ └── header-attrs-2.6 │ │ │ └── header-attrs.js │ ├── Segment-the-tracks.html │ ├── Segment-the-tracks_files │ │ ├── .DS_Store │ │ ├── accessible-code-block-0.0.1 │ │ │ └── empty-anchor.js │ │ ├── figure-html │ │ │ ├── LML traceplots-1.png │ │ │ ├── LML traceplots-2.png │ │ │ ├── LML traceplots-3.png │ │ │ ├── LML traceplots-4.png │ │ │ ├── LML traceplots-5.png │ │ │ ├── LML-traceplots-1.png │ │ │ ├── LML-traceplots-2.png │ │ │ ├── LML-traceplots-3.png │ │ │ ├── heatmaps-1.png │ │ │ ├── heatmaps-2.png │ │ │ ├── heatmaps-3.png │ │ │ ├── heatmaps-4.png │ │ │ ├── heatmaps-5.png │ │ │ ├── nbrks traceplots-1.png │ │ │ ├── nbrks traceplots-2.png │ │ │ ├── nbrks traceplots-3.png │ │ │ ├── nbrks traceplots-4.png │ │ │ ├── nbrks traceplots-5.png │ │ │ ├── nbrks-traceplots-1.png │ │ │ ├── nbrks-traceplots-2.png │ │ │ └── nbrks-traceplots-3.png │ │ ├── header-attrs-2.10 │ │ │ └── header-attrs.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ └── header-attrs-2.6 │ │ │ └── header-attrs.js │ ├── Shiny-Fig1.png │ ├── Shiny-Fig2.png │ ├── Shiny-Fig3.png │ ├── Shiny-Fig4.png │ ├── Shiny-Fig5.png │ ├── Shiny-Fig6.png │ ├── Shiny-Fig7.png │ ├── Shiny-figs │ │ ├── Fig1.png │ │ ├── Fig2.png │ │ ├── Fig3.png │ │ ├── Fig4.png │ │ ├── Fig5.png │ │ ├── Fig6.png │ │ └── Fig7.png │ └── index.html ├── authors.html ├── bootstrap-toc.css ├── bootstrap-toc.js ├── docsearch.css ├── docsearch.js ├── favicon-16x16.png ├── favicon-32x32.png ├── favicon.ico ├── index.html ├── link.svg ├── logo.png ├── news │ └── index.html ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml ├── reference │ ├── .DS_Store │ ├── .gitignore │ ├── CumSumInv.html │ ├── Rplot001.png │ ├── Rplot002.png │ ├── SampleZAgg.html │ ├── StoreZ.html │ ├── SummarizeDat.html │ ├── assign_behavior.html │ ├── assign_tseg.html │ ├── assign_tseg_internal.html │ ├── behav_gibbs_sampler.html │ ├── behav_seg_image.html │ ├── cluster_obs.html │ ├── cluster_segments.html │ ├── df_to_list.html │ ├── discrete_move_var.html │ ├── expand_behavior.html │ ├── extract_prop.html │ ├── figures │ │ └── logo.png │ ├── filter_time.html │ ├── find_breaks.html │ ├── get.llk.mixmod.html │ ├── get.theta.html │ ├── get_MAP.html │ ├── get_MAP_internal.html │ ├── get_behav_hist.html │ ├── get_breakpts.html │ ├── get_summary_stats.html │ ├── index.html │ ├── insert_NAs.html │ ├── log_marg_likel.html │ ├── pipe.html │ ├── plot_breakpoints-1.png │ ├── plot_breakpoints.html │ ├── plot_breakpoints_behav.html │ ├── plot_heatmap-1.png │ ├── plot_heatmap-10.png │ ├── plot_heatmap-2.png │ ├── plot_heatmap-3.png │ ├── plot_heatmap-4.png │ ├── plot_heatmap-5.png │ ├── plot_heatmap-6.png │ ├── plot_heatmap-7.png │ ├── plot_heatmap-8.png │ ├── plot_heatmap-9.png │ ├── plot_heatmap.html │ ├── plot_heatmap_behav.html │ ├── prep_data.html │ ├── prep_data_internal.html │ ├── rmultinom1.html │ ├── rmultinom2.html │ ├── round_track_time.html │ ├── samp_move.html │ ├── sample.gamma.mixmod.html │ ├── sample.phi.html │ ├── sample.phi.mixmod.html │ ├── sample.v.html │ ├── sample.v.mixmod.html │ ├── sample.z.html │ ├── sample.z.mixmod.html │ ├── segment_behavior.html │ ├── shiny_tracks.html │ ├── summarize1.html │ ├── summarize_tsegs.html │ ├── traceplot-1.png │ ├── traceplot-2.png │ ├── traceplot.html │ ├── tracks.html │ ├── tracks.list.html │ └── tracks.seg.html └── sitemap.xml ├── inst ├── CITATION └── WORDLIST ├── logo.png ├── man ├── .DS_Store ├── CumSumInv.Rd ├── SampleZAgg.Rd ├── StoreZ.Rd ├── SummarizeDat.Rd ├── assign_behavior.Rd ├── assign_tseg.Rd ├── assign_tseg_internal.Rd ├── behav_gibbs_sampler.Rd ├── behav_seg_image.Rd ├── cluster_obs.Rd ├── cluster_segments.Rd ├── df_to_list.Rd ├── discrete_move_var.Rd ├── expand_behavior.Rd ├── extract_prop.Rd ├── figures │ ├── .DS_Store │ └── logo.png ├── filter_time.Rd ├── find_breaks.Rd ├── get.llk.mixmod.Rd ├── get.theta.Rd ├── get_MAP.Rd ├── get_behav_hist.Rd ├── get_breakpts.Rd ├── get_summary_stats.Rd ├── insert_NAs.Rd ├── log_marg_likel.Rd ├── pipe.Rd ├── plot_breakpoints.Rd ├── plot_breakpoints_behav.Rd ├── prep_data.Rd ├── prep_data_internal.Rd ├── rmultinom1.Rd ├── rmultinom2.Rd ├── round_track_time.Rd ├── samp_move.Rd ├── sample.gamma.mixmod.Rd ├── sample.phi.Rd ├── sample.phi.mixmod.Rd ├── sample.v.Rd ├── sample.v.mixmod.Rd ├── sample.z.Rd ├── sample.z.mixmod.Rd ├── segment_behavior.Rd ├── shiny_tracks.Rd ├── summarize1.Rd ├── summarize_tsegs.Rd ├── traceplot.Rd ├── tracks.Rd ├── tracks.list.Rd └── tracks.seg.Rd ├── pkgdown ├── .DS_Store └── favicon │ ├── apple-touch-icon-120x120.png │ ├── apple-touch-icon-152x152.png │ ├── apple-touch-icon-180x180.png │ ├── apple-touch-icon-60x60.png │ ├── apple-touch-icon-76x76.png │ ├── apple-touch-icon.png │ ├── favicon-16x16.png │ ├── favicon-32x32.png │ └── favicon.ico ├── src ├── .gitignore ├── LDA_aux1.cpp ├── RcppExports.cpp └── mixmod_aux1.cpp ├── tests ├── .DS_Store ├── spelling.R ├── testthat.R └── testthat │ ├── .DS_Store │ ├── test-assign_behavior.R │ ├── test-assign_tseg.R │ ├── test-cluster_obs.R │ ├── test-cluster_segments.R │ ├── test-df_to_list.R │ ├── test-discrete_move_var.R │ ├── test-expand_behavior.R │ ├── test-extract_prop.R │ ├── test-filter_time.R │ ├── test-find_breaks.R │ ├── test-get_MAP.R │ ├── test-get_behav_hist.R │ ├── test-get_breakpts.R │ ├── test-insert_NAs.R │ ├── test-prep_data.R │ ├── test-round_track_time.R │ ├── test-segment_behavior.R │ └── test-summarize_tsegs.R └── vignettes ├── .DS_Store ├── .gitignore ├── Cluster-observations.Rmd ├── Cluster-track-segments.Rmd ├── Exploratory-analysis-in-Shiny.Rmd ├── Pre-specify_brkpts_and_zero-inflated_data.Rmd ├── Prepare-data-for-analysis.Rmd ├── Segment-the-tracks.Rmd ├── Shiny-Fig1.png ├── Shiny-Fig2.png ├── Shiny-Fig3.png ├── Shiny-Fig4.png ├── Shiny-Fig5.png ├── Shiny-Fig6.png └── Shiny-Fig7.png /.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/.DS_Store -------------------------------------------------------------------------------- /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/.github/workflows/R-CMD-check.yaml -------------------------------------------------------------------------------- /.github/workflows/test-coverage.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/.github/workflows/test-coverage.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- 1 | .Rhistory 2 | .RData 3 | .Rproj.user 4 | inst/doc 5 | -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/LICENSE.md -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/NEWS.md -------------------------------------------------------------------------------- /R/LDA_gibbs_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/LDA_gibbs_functions.R -------------------------------------------------------------------------------- /R/LDA_gibbs_sampler.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/LDA_gibbs_sampler.R -------------------------------------------------------------------------------- /R/LDA_helper_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/LDA_helper_functions.R -------------------------------------------------------------------------------- /R/RcppExports.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/RcppExports.R -------------------------------------------------------------------------------- /R/bayesmove-package.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/bayesmove-package.R -------------------------------------------------------------------------------- /R/mixmod_gibbs_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/mixmod_gibbs_functions.R -------------------------------------------------------------------------------- /R/mixmod_gibbs_sampler.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/mixmod_gibbs_sampler.R -------------------------------------------------------------------------------- /R/segmentation_gibbs_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/segmentation_gibbs_functions.R -------------------------------------------------------------------------------- /R/segmentation_gibbs_sampler.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/segmentation_gibbs_sampler.R -------------------------------------------------------------------------------- /R/segmentation_helper_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/segmentation_helper_functions.R -------------------------------------------------------------------------------- /R/shinyapp.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/shinyapp.R -------------------------------------------------------------------------------- /R/tracks.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/tracks.R -------------------------------------------------------------------------------- /R/tracks.list.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/tracks.list.R -------------------------------------------------------------------------------- /R/tracks.seg.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/tracks.seg.R -------------------------------------------------------------------------------- /R/utils-pipe.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/utils-pipe.R -------------------------------------------------------------------------------- /R/zzz.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/R/zzz.R -------------------------------------------------------------------------------- /README.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/README.Rmd -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/README.md -------------------------------------------------------------------------------- /_pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/_pkgdown.yml -------------------------------------------------------------------------------- /bayesmove.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/bayesmove.Rproj -------------------------------------------------------------------------------- /codecov.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/codecov.yml -------------------------------------------------------------------------------- /cran-comments.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/cran-comments.md -------------------------------------------------------------------------------- /data/tracks.list.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/data/tracks.list.rda -------------------------------------------------------------------------------- /data/tracks.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/data/tracks.rda -------------------------------------------------------------------------------- /data/tracks.seg.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/data/tracks.seg.rda -------------------------------------------------------------------------------- /docs/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/.DS_Store -------------------------------------------------------------------------------- /docs/404.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/404.html -------------------------------------------------------------------------------- /docs/LICENSE.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/LICENSE.html -------------------------------------------------------------------------------- /docs/apple-touch-icon-120x120.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon-120x120.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-152x152.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon-152x152.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-180x180.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon-180x180.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-60x60.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon-60x60.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-76x76.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon-76x76.png -------------------------------------------------------------------------------- /docs/apple-touch-icon.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/apple-touch-icon.png -------------------------------------------------------------------------------- /docs/articles/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/.DS_Store -------------------------------------------------------------------------------- /docs/articles/Cluster-observations.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations.html -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/accessible-code-block-0.0.1/empty-anchor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/accessible-code-block-0.0.1/empty-anchor.js -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/bin_data-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/bin_data-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/bin_data-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/bin_data-2.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/load data-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/load data-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/load_data-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/load_data-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/plot_distribs-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/plot_distribs-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/prep data-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/prep data-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/prep data-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/prep data-2.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/run model-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/run model-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/run_model-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/run_model-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-2.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-3-3.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-4-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/unnamed-chunk-4-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/viz_distribs-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/viz_distribs-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/figure-html/viz_distribs-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/figure-html/viz_distribs-2.png -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/header-attrs-2.10/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/header-attrs-2.10/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Cluster-observations_files/header-attrs-2.6/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-observations_files/header-attrs-2.6/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments.html -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/.DS_Store -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/accessible-code-block-0.0.1/empty-anchor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/accessible-code-block-0.0.1/empty-anchor.js -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/.DS_Store -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/expand-behav-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/expand-behav-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-behav-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-behav-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-2.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-3.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-4.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/map-separate-behavs-5.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/plot-distribs-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/plot-distribs-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/plot-theta-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/plot-theta-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/figure-html/traceplot-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/figure-html/traceplot-1.png -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/header-attrs-2.10/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/header-attrs-2.10/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Cluster-track-segments_files/header-attrs-2.6/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Cluster-track-segments_files/header-attrs-2.6/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny.html -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/accessible-code-block-0.0.1/empty-anchor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/accessible-code-block-0.0.1/empty-anchor.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.css.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.css.map -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap-theme.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.css.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.css.map -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/bootstrap.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/cerulean.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/cerulean.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/cosmo.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/cosmo.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/darkly.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/darkly.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/flatly.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/flatly.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Lato.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Lato.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/LatoBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/LatoBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/LatoItalic.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/LatoItalic.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/NewsCycle.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/NewsCycle.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSans.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSans.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Raleway.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Raleway.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RalewayBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RalewayBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Roboto.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Roboto.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoLight.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoLight.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoMedium.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/RobotoMedium.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Ubuntu.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/fonts/Ubuntu.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/journal.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/journal.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/lumen.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/lumen.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/paper.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/paper.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/readable.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/readable.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/sandstone.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/sandstone.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/simplex.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/simplex.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/spacelab.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/spacelab.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/united.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/united.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/yeti.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/css/yeti.min.css -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2 -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/bootstrap.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/bootstrap.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/bootstrap.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/bootstrap.min.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/npm.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/js/npm.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/shim/html5shiv.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/shim/html5shiv.min.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/shim/respond.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/bootstrap-3.3.5/shim/respond.min.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/figure-html/load data-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/figure-html/load data-1.png -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/figure-html/load-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/figure-html/load-1.png -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.10/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.10/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.6/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/header-attrs-2.6/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/jquery-1.11.3/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/jquery-1.11.3/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/codefolding.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/codefolding.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/sourceembed.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/sourceembed.js -------------------------------------------------------------------------------- /docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/tabsets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Exploratory-analysis-in-Shiny_files/navigation-1.1/tabsets.js -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data.html -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/assign-states-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/assign-states-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/assign-states-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/assign-states-2.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-2.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/map-state-props-3.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/phi-extract-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/phi-extract-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-2.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-brks-3.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-tracks-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/plot-tracks-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/theta-estim-long-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/theta-estim-long-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/theta-extract-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/theta-extract-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-cluster-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-cluster-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-segment-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-segment-1.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-segment-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/figure-html/traceplot-segment-2.png -------------------------------------------------------------------------------- /docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Pre-specify_brkpts_and_zero-inflated_data_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis.html -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/.DS_Store -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/accessible-code-block-0.0.1/empty-anchor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/accessible-code-block-0.0.1/empty-anchor.js -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/cont-distribs-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/cont-distribs-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/cont-distribs-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/cont-distribs-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-SL-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-SL-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-SL-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-SL-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-TA-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-TA-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-TA-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/distrib-lims-TA-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/hist-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/hist-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/plot tracks-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/plot tracks-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/plot-tracks-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/plot-tracks-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/round times-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/round times-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/round-times-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/round-times-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-2-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-2-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-3-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-3-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-3-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-3-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-4-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-4-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-4-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-4-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-5-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-5-1.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-5-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/figure-html/unnamed-chunk-5-2.png -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/header-attrs-2.10/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/header-attrs-2.10/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Prepare-data-for-analysis_files/header-attrs-2.6/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Prepare-data-for-analysis_files/header-attrs-2.6/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks.html -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/.DS_Store -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/accessible-code-block-0.0.1/empty-anchor.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/accessible-code-block-0.0.1/empty-anchor.js -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-1.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-2.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-3.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-4.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML traceplots-5.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-1.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-2.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/LML-traceplots-3.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/heatmaps-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/heatmaps-1.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/heatmaps-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/heatmaps-2.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/heatmaps-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/heatmaps-3.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/heatmaps-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/heatmaps-4.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/heatmaps-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/heatmaps-5.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-1.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-2.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-3.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-4.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks traceplots-5.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-1.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-2.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/figure-html/nbrks-traceplots-3.png -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/header-attrs-2.10/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/header-attrs-2.10/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/header-attrs-2.11/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/header-attrs-2.11/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Segment-the-tracks_files/header-attrs-2.6/header-attrs.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Segment-the-tracks_files/header-attrs-2.6/header-attrs.js -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig1.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig2.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig3.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig4.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig5.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig6.png -------------------------------------------------------------------------------- /docs/articles/Shiny-Fig7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-Fig7.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig1.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig2.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig3.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig4.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig5.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig6.png -------------------------------------------------------------------------------- /docs/articles/Shiny-figs/Fig7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/Shiny-figs/Fig7.png -------------------------------------------------------------------------------- /docs/articles/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/articles/index.html -------------------------------------------------------------------------------- /docs/authors.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/authors.html -------------------------------------------------------------------------------- /docs/bootstrap-toc.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/bootstrap-toc.css -------------------------------------------------------------------------------- /docs/bootstrap-toc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/bootstrap-toc.js -------------------------------------------------------------------------------- /docs/docsearch.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/docsearch.css -------------------------------------------------------------------------------- /docs/docsearch.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/docsearch.js -------------------------------------------------------------------------------- /docs/favicon-16x16.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/favicon-16x16.png -------------------------------------------------------------------------------- /docs/favicon-32x32.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/favicon-32x32.png -------------------------------------------------------------------------------- /docs/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/favicon.ico -------------------------------------------------------------------------------- /docs/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/index.html -------------------------------------------------------------------------------- /docs/link.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/link.svg -------------------------------------------------------------------------------- /docs/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/logo.png -------------------------------------------------------------------------------- /docs/news/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/news/index.html -------------------------------------------------------------------------------- /docs/pkgdown.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/pkgdown.css -------------------------------------------------------------------------------- /docs/pkgdown.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/pkgdown.js -------------------------------------------------------------------------------- /docs/pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/pkgdown.yml -------------------------------------------------------------------------------- /docs/reference/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/.DS_Store -------------------------------------------------------------------------------- /docs/reference/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/.gitignore -------------------------------------------------------------------------------- /docs/reference/CumSumInv.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/CumSumInv.html -------------------------------------------------------------------------------- /docs/reference/Rplot001.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/Rplot001.png -------------------------------------------------------------------------------- /docs/reference/Rplot002.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/Rplot002.png -------------------------------------------------------------------------------- /docs/reference/SampleZAgg.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/SampleZAgg.html -------------------------------------------------------------------------------- /docs/reference/StoreZ.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/StoreZ.html -------------------------------------------------------------------------------- /docs/reference/SummarizeDat.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/SummarizeDat.html -------------------------------------------------------------------------------- /docs/reference/assign_behavior.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/assign_behavior.html -------------------------------------------------------------------------------- /docs/reference/assign_tseg.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/assign_tseg.html -------------------------------------------------------------------------------- /docs/reference/assign_tseg_internal.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/assign_tseg_internal.html -------------------------------------------------------------------------------- /docs/reference/behav_gibbs_sampler.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/behav_gibbs_sampler.html -------------------------------------------------------------------------------- /docs/reference/behav_seg_image.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/behav_seg_image.html -------------------------------------------------------------------------------- /docs/reference/cluster_obs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/cluster_obs.html -------------------------------------------------------------------------------- /docs/reference/cluster_segments.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/cluster_segments.html -------------------------------------------------------------------------------- /docs/reference/df_to_list.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/df_to_list.html -------------------------------------------------------------------------------- /docs/reference/discrete_move_var.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/discrete_move_var.html -------------------------------------------------------------------------------- /docs/reference/expand_behavior.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/expand_behavior.html -------------------------------------------------------------------------------- /docs/reference/extract_prop.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/extract_prop.html -------------------------------------------------------------------------------- /docs/reference/figures/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/figures/logo.png -------------------------------------------------------------------------------- /docs/reference/filter_time.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/filter_time.html -------------------------------------------------------------------------------- /docs/reference/find_breaks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/find_breaks.html -------------------------------------------------------------------------------- /docs/reference/get.llk.mixmod.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get.llk.mixmod.html -------------------------------------------------------------------------------- /docs/reference/get.theta.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get.theta.html -------------------------------------------------------------------------------- /docs/reference/get_MAP.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get_MAP.html -------------------------------------------------------------------------------- /docs/reference/get_MAP_internal.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get_MAP_internal.html -------------------------------------------------------------------------------- /docs/reference/get_behav_hist.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get_behav_hist.html -------------------------------------------------------------------------------- /docs/reference/get_breakpts.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get_breakpts.html -------------------------------------------------------------------------------- /docs/reference/get_summary_stats.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/get_summary_stats.html -------------------------------------------------------------------------------- /docs/reference/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/index.html -------------------------------------------------------------------------------- /docs/reference/insert_NAs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/insert_NAs.html -------------------------------------------------------------------------------- /docs/reference/log_marg_likel.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/log_marg_likel.html -------------------------------------------------------------------------------- /docs/reference/pipe.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/pipe.html -------------------------------------------------------------------------------- /docs/reference/plot_breakpoints-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_breakpoints-1.png -------------------------------------------------------------------------------- /docs/reference/plot_breakpoints.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_breakpoints.html -------------------------------------------------------------------------------- /docs/reference/plot_breakpoints_behav.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_breakpoints_behav.html -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-1.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-10.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-10.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-2.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-3.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-4.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-5.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-6.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-7.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-8.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-8.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap-9.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap-9.png -------------------------------------------------------------------------------- /docs/reference/plot_heatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap.html -------------------------------------------------------------------------------- /docs/reference/plot_heatmap_behav.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/plot_heatmap_behav.html -------------------------------------------------------------------------------- /docs/reference/prep_data.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/prep_data.html -------------------------------------------------------------------------------- /docs/reference/prep_data_internal.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/prep_data_internal.html -------------------------------------------------------------------------------- /docs/reference/rmultinom1.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/rmultinom1.html -------------------------------------------------------------------------------- /docs/reference/rmultinom2.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/rmultinom2.html -------------------------------------------------------------------------------- /docs/reference/round_track_time.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/round_track_time.html -------------------------------------------------------------------------------- /docs/reference/samp_move.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/samp_move.html -------------------------------------------------------------------------------- /docs/reference/sample.gamma.mixmod.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.gamma.mixmod.html -------------------------------------------------------------------------------- /docs/reference/sample.phi.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.phi.html -------------------------------------------------------------------------------- /docs/reference/sample.phi.mixmod.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.phi.mixmod.html -------------------------------------------------------------------------------- /docs/reference/sample.v.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.v.html -------------------------------------------------------------------------------- /docs/reference/sample.v.mixmod.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.v.mixmod.html -------------------------------------------------------------------------------- /docs/reference/sample.z.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.z.html -------------------------------------------------------------------------------- /docs/reference/sample.z.mixmod.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/sample.z.mixmod.html -------------------------------------------------------------------------------- /docs/reference/segment_behavior.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/segment_behavior.html -------------------------------------------------------------------------------- /docs/reference/shiny_tracks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/shiny_tracks.html -------------------------------------------------------------------------------- /docs/reference/summarize1.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/summarize1.html -------------------------------------------------------------------------------- /docs/reference/summarize_tsegs.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/summarize_tsegs.html -------------------------------------------------------------------------------- /docs/reference/traceplot-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/traceplot-1.png -------------------------------------------------------------------------------- /docs/reference/traceplot-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/traceplot-2.png -------------------------------------------------------------------------------- /docs/reference/traceplot.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/traceplot.html -------------------------------------------------------------------------------- /docs/reference/tracks.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/tracks.html -------------------------------------------------------------------------------- /docs/reference/tracks.list.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/tracks.list.html -------------------------------------------------------------------------------- /docs/reference/tracks.seg.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/reference/tracks.seg.html -------------------------------------------------------------------------------- /docs/sitemap.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/docs/sitemap.xml -------------------------------------------------------------------------------- /inst/CITATION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/inst/CITATION -------------------------------------------------------------------------------- /inst/WORDLIST: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/inst/WORDLIST -------------------------------------------------------------------------------- /logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/logo.png -------------------------------------------------------------------------------- /man/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/.DS_Store -------------------------------------------------------------------------------- /man/CumSumInv.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/CumSumInv.Rd -------------------------------------------------------------------------------- /man/SampleZAgg.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/SampleZAgg.Rd -------------------------------------------------------------------------------- /man/StoreZ.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/StoreZ.Rd -------------------------------------------------------------------------------- /man/SummarizeDat.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/SummarizeDat.Rd -------------------------------------------------------------------------------- /man/assign_behavior.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/assign_behavior.Rd -------------------------------------------------------------------------------- /man/assign_tseg.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/assign_tseg.Rd -------------------------------------------------------------------------------- /man/assign_tseg_internal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/assign_tseg_internal.Rd -------------------------------------------------------------------------------- /man/behav_gibbs_sampler.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/behav_gibbs_sampler.Rd -------------------------------------------------------------------------------- /man/behav_seg_image.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/behav_seg_image.Rd -------------------------------------------------------------------------------- /man/cluster_obs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/cluster_obs.Rd -------------------------------------------------------------------------------- /man/cluster_segments.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/cluster_segments.Rd -------------------------------------------------------------------------------- /man/df_to_list.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/df_to_list.Rd -------------------------------------------------------------------------------- /man/discrete_move_var.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/discrete_move_var.Rd -------------------------------------------------------------------------------- /man/expand_behavior.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/expand_behavior.Rd -------------------------------------------------------------------------------- /man/extract_prop.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/extract_prop.Rd -------------------------------------------------------------------------------- /man/figures/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/figures/.DS_Store -------------------------------------------------------------------------------- /man/figures/logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/figures/logo.png -------------------------------------------------------------------------------- /man/filter_time.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/filter_time.Rd -------------------------------------------------------------------------------- /man/find_breaks.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/find_breaks.Rd -------------------------------------------------------------------------------- /man/get.llk.mixmod.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get.llk.mixmod.Rd -------------------------------------------------------------------------------- /man/get.theta.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get.theta.Rd -------------------------------------------------------------------------------- /man/get_MAP.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get_MAP.Rd -------------------------------------------------------------------------------- /man/get_behav_hist.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get_behav_hist.Rd -------------------------------------------------------------------------------- /man/get_breakpts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get_breakpts.Rd -------------------------------------------------------------------------------- /man/get_summary_stats.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/get_summary_stats.Rd -------------------------------------------------------------------------------- /man/insert_NAs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/insert_NAs.Rd -------------------------------------------------------------------------------- /man/log_marg_likel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/log_marg_likel.Rd -------------------------------------------------------------------------------- /man/pipe.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/pipe.Rd -------------------------------------------------------------------------------- /man/plot_breakpoints.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/plot_breakpoints.Rd -------------------------------------------------------------------------------- /man/plot_breakpoints_behav.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/plot_breakpoints_behav.Rd -------------------------------------------------------------------------------- /man/prep_data.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/prep_data.Rd -------------------------------------------------------------------------------- /man/prep_data_internal.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/prep_data_internal.Rd -------------------------------------------------------------------------------- /man/rmultinom1.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/rmultinom1.Rd -------------------------------------------------------------------------------- /man/rmultinom2.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/rmultinom2.Rd -------------------------------------------------------------------------------- /man/round_track_time.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/round_track_time.Rd -------------------------------------------------------------------------------- /man/samp_move.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/samp_move.Rd -------------------------------------------------------------------------------- /man/sample.gamma.mixmod.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.gamma.mixmod.Rd -------------------------------------------------------------------------------- /man/sample.phi.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.phi.Rd -------------------------------------------------------------------------------- /man/sample.phi.mixmod.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.phi.mixmod.Rd -------------------------------------------------------------------------------- /man/sample.v.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.v.Rd -------------------------------------------------------------------------------- /man/sample.v.mixmod.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.v.mixmod.Rd -------------------------------------------------------------------------------- /man/sample.z.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.z.Rd -------------------------------------------------------------------------------- /man/sample.z.mixmod.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/sample.z.mixmod.Rd -------------------------------------------------------------------------------- /man/segment_behavior.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/segment_behavior.Rd -------------------------------------------------------------------------------- /man/shiny_tracks.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/shiny_tracks.Rd -------------------------------------------------------------------------------- /man/summarize1.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/summarize1.Rd -------------------------------------------------------------------------------- /man/summarize_tsegs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/summarize_tsegs.Rd -------------------------------------------------------------------------------- /man/traceplot.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/traceplot.Rd -------------------------------------------------------------------------------- /man/tracks.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/tracks.Rd -------------------------------------------------------------------------------- /man/tracks.list.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/tracks.list.Rd -------------------------------------------------------------------------------- /man/tracks.seg.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/man/tracks.seg.Rd -------------------------------------------------------------------------------- /pkgdown/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/.DS_Store -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-120x120.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon-120x120.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-152x152.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon-152x152.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-180x180.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon-180x180.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-60x60.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon-60x60.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-76x76.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon-76x76.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/apple-touch-icon.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon-16x16.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/favicon-16x16.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon-32x32.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/favicon-32x32.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/pkgdown/favicon/favicon.ico -------------------------------------------------------------------------------- /src/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/src/.gitignore -------------------------------------------------------------------------------- /src/LDA_aux1.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/src/LDA_aux1.cpp -------------------------------------------------------------------------------- /src/RcppExports.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/src/RcppExports.cpp -------------------------------------------------------------------------------- /src/mixmod_aux1.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/src/mixmod_aux1.cpp -------------------------------------------------------------------------------- /tests/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/.DS_Store -------------------------------------------------------------------------------- /tests/spelling.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/spelling.R -------------------------------------------------------------------------------- /tests/testthat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat.R -------------------------------------------------------------------------------- /tests/testthat/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/.DS_Store -------------------------------------------------------------------------------- /tests/testthat/test-assign_behavior.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-assign_behavior.R -------------------------------------------------------------------------------- /tests/testthat/test-assign_tseg.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-assign_tseg.R -------------------------------------------------------------------------------- /tests/testthat/test-cluster_obs.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-cluster_obs.R -------------------------------------------------------------------------------- /tests/testthat/test-cluster_segments.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-cluster_segments.R -------------------------------------------------------------------------------- /tests/testthat/test-df_to_list.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-df_to_list.R -------------------------------------------------------------------------------- /tests/testthat/test-discrete_move_var.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-discrete_move_var.R -------------------------------------------------------------------------------- /tests/testthat/test-expand_behavior.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-expand_behavior.R -------------------------------------------------------------------------------- /tests/testthat/test-extract_prop.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-extract_prop.R -------------------------------------------------------------------------------- /tests/testthat/test-filter_time.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-filter_time.R -------------------------------------------------------------------------------- /tests/testthat/test-find_breaks.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-find_breaks.R -------------------------------------------------------------------------------- /tests/testthat/test-get_MAP.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-get_MAP.R -------------------------------------------------------------------------------- /tests/testthat/test-get_behav_hist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-get_behav_hist.R -------------------------------------------------------------------------------- /tests/testthat/test-get_breakpts.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-get_breakpts.R -------------------------------------------------------------------------------- /tests/testthat/test-insert_NAs.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-insert_NAs.R -------------------------------------------------------------------------------- /tests/testthat/test-prep_data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-prep_data.R -------------------------------------------------------------------------------- /tests/testthat/test-round_track_time.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-round_track_time.R -------------------------------------------------------------------------------- /tests/testthat/test-segment_behavior.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-segment_behavior.R -------------------------------------------------------------------------------- /tests/testthat/test-summarize_tsegs.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/tests/testthat/test-summarize_tsegs.R -------------------------------------------------------------------------------- /vignettes/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/.DS_Store -------------------------------------------------------------------------------- /vignettes/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | *.R 3 | -------------------------------------------------------------------------------- /vignettes/Cluster-observations.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Cluster-observations.Rmd -------------------------------------------------------------------------------- /vignettes/Cluster-track-segments.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Cluster-track-segments.Rmd -------------------------------------------------------------------------------- /vignettes/Exploratory-analysis-in-Shiny.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Exploratory-analysis-in-Shiny.Rmd -------------------------------------------------------------------------------- /vignettes/Pre-specify_brkpts_and_zero-inflated_data.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Pre-specify_brkpts_and_zero-inflated_data.Rmd -------------------------------------------------------------------------------- /vignettes/Prepare-data-for-analysis.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Prepare-data-for-analysis.Rmd -------------------------------------------------------------------------------- /vignettes/Segment-the-tracks.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Segment-the-tracks.Rmd -------------------------------------------------------------------------------- /vignettes/Shiny-Fig1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig1.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig2.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig3.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig4.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig5.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig6.png -------------------------------------------------------------------------------- /vignettes/Shiny-Fig7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshcullen/bayesmove/HEAD/vignettes/Shiny-Fig7.png --------------------------------------------------------------------------------