├── .github ├── .gitignore └── workflows │ └── pkgdown.yaml ├── .gitignore ├── CRAN-SUBMISSION ├── DESCRIPTION ├── NAMESPACE ├── NEWS ├── R ├── BinaryToCensoring.R ├── DeterministicFunctions.R ├── GeneralUtilities.R ├── ltmle-package.R ├── ltmle.R ├── ltmle_sg.R └── zzz.R ├── README.md ├── _pkgdown.yml ├── cran-comments.md ├── data └── sampleDataForLtmleMSM.RData ├── index.md ├── inst └── CITATION ├── man ├── BinaryToCensoring.Rd ├── deterministic.g.function_template.Rd ├── ltmle-package.Rd ├── ltmle.Rd ├── sampleDataForLtmleMSM.Rd └── summary.ltmle.Rd ├── tests ├── testthat.R └── testthat │ ├── test-(init).R │ ├── test-AbarAndRegimes.R │ ├── test-BaselineCovMSM.R │ ├── test-BinaryToCensoring.R │ ├── test-CheckInputs.R │ ├── test-CleanData.R │ ├── test-DeterministicFunctions.R │ ├── test-EffectMeasures.R │ ├── test-ErrorHandling.R │ ├── test-EstimateVariance.R │ ├── test-GeneralUtilities.R │ ├── test-GetDefaultForm.R │ ├── test-IDs.R │ ├── test-Weights.R │ ├── test-print.R │ ├── test-print.summary.ltmleMSM.R │ ├── test-random.R │ └── test-summary.ltmle.R └── vignettes ├── .gitignore └── articles ├── a01_overview.Rmd ├── a02_intro.Rmd ├── a03_msm.Rmd └── a04_deterministic-functions.Rmd /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/pkgdown.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshuaschwab/ltmle/HEAD/.github/workflows/pkgdown.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/joshuaschwab/ltmle/HEAD/.gitignore -------------------------------------------------------------------------------- /CRAN-SUBMISSION: 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