├── .gitignore ├── LICENSE ├── README.md ├── cryoCARE.Singularity ├── example ├── 01_Split_Frames.ipynb ├── 02_Tomogram_Reconstruction.ipynb ├── 03_Training_Data_Generation.ipynb ├── 04_Train_cryoCARE_Network.ipynb ├── 05_Predict_cryoCARE.ipynb ├── data │ └── .gitkeep ├── generate_train_data.py ├── train_cryo_care.py └── utils.py ├── preview.png └── user └── .gitkeep /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/README.md -------------------------------------------------------------------------------- /cryoCARE.Singularity: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/cryoCARE.Singularity -------------------------------------------------------------------------------- /example/01_Split_Frames.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/01_Split_Frames.ipynb -------------------------------------------------------------------------------- /example/02_Tomogram_Reconstruction.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/02_Tomogram_Reconstruction.ipynb -------------------------------------------------------------------------------- /example/03_Training_Data_Generation.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/03_Training_Data_Generation.ipynb -------------------------------------------------------------------------------- /example/04_Train_cryoCARE_Network.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/04_Train_cryoCARE_Network.ipynb -------------------------------------------------------------------------------- /example/05_Predict_cryoCARE.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/05_Predict_cryoCARE.ipynb -------------------------------------------------------------------------------- /example/data/.gitkeep: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /example/generate_train_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/generate_train_data.py -------------------------------------------------------------------------------- /example/train_cryo_care.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/train_cryo_care.py -------------------------------------------------------------------------------- /example/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/example/utils.py -------------------------------------------------------------------------------- /preview.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/juglab/cryoCARE_T2T/HEAD/preview.png -------------------------------------------------------------------------------- /user/.gitkeep: -------------------------------------------------------------------------------- 1 | --------------------------------------------------------------------------------