├── Makefile ├── README.md ├── autogen.R ├── bin ├── install_and_check.sh ├── install_dependencies.sh └── run_tests.sh ├── test.R └── tmbstan ├── DESCRIPTION ├── NAMESPACE ├── NEWS ├── R ├── tmbstan.R └── zzz.R ├── configure ├── configure.win ├── inst ├── CITATION ├── model.stan └── model226.stan ├── man └── tmbstan.Rd ├── src ├── Makevars ├── Modules.cpp ├── include │ └── custom_func.hpp └── init.cpp └── tools └── autogen.R /Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/Makefile -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/README.md -------------------------------------------------------------------------------- /autogen.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/autogen.R -------------------------------------------------------------------------------- /bin/install_and_check.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/bin/install_and_check.sh -------------------------------------------------------------------------------- /bin/install_dependencies.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/bin/install_dependencies.sh -------------------------------------------------------------------------------- /bin/run_tests.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/bin/run_tests.sh -------------------------------------------------------------------------------- /test.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/test.R -------------------------------------------------------------------------------- /tmbstan/DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/DESCRIPTION -------------------------------------------------------------------------------- /tmbstan/NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/NAMESPACE -------------------------------------------------------------------------------- /tmbstan/NEWS: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/NEWS -------------------------------------------------------------------------------- /tmbstan/R/tmbstan.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/R/tmbstan.R -------------------------------------------------------------------------------- /tmbstan/R/zzz.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/R/zzz.R -------------------------------------------------------------------------------- /tmbstan/configure: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/configure -------------------------------------------------------------------------------- /tmbstan/configure.win: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/configure.win -------------------------------------------------------------------------------- /tmbstan/inst/CITATION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/inst/CITATION -------------------------------------------------------------------------------- /tmbstan/inst/model.stan: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/inst/model.stan -------------------------------------------------------------------------------- /tmbstan/inst/model226.stan: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/inst/model226.stan -------------------------------------------------------------------------------- /tmbstan/man/tmbstan.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/man/tmbstan.Rd -------------------------------------------------------------------------------- /tmbstan/src/Makevars: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/src/Makevars -------------------------------------------------------------------------------- /tmbstan/src/Modules.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/src/Modules.cpp -------------------------------------------------------------------------------- /tmbstan/src/include/custom_func.hpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/src/include/custom_func.hpp -------------------------------------------------------------------------------- /tmbstan/src/init.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/src/init.cpp -------------------------------------------------------------------------------- /tmbstan/tools/autogen.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kaskr/tmbstan/HEAD/tmbstan/tools/autogen.R --------------------------------------------------------------------------------