├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ └── R-CMD-check.yaml ├── .gitignore ├── DESCRIPTION ├── Makefile ├── NAMESPACE ├── NEWS.md ├── R ├── S3_methods.R ├── autojags.R ├── densityplot.R ├── jags.R ├── jags_View.R ├── jagsbasic.R ├── mcmc_tools.R ├── plot_tools.R ├── ppcheck.R ├── process_input.R ├── process_output.R ├── run_rjags.R ├── traceplot.R ├── update.R └── whiskerplot.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── inst └── tinytest │ ├── autojags_ref.Rds │ ├── autojags_ref_alliter.Rds │ ├── autojags_ref_codaonly.Rds │ ├── calc_stats_output.Rds │ ├── coda_samples.Rds │ ├── jagsbasic_ref_saved.Rds │ ├── jagsbasic_ref_update.Rds │ ├── jagsbasic_reference_fit.Rds │ ├── longley_reference_fit.Rds │ ├── old_jagsUI_output.Rds │ ├── old_process_output.Rds │ ├── one_sample.Rds │ ├── reference_codaOnly.Rds │ ├── reference_noDIC.Rds │ ├── reference_parsorder.Rds │ ├── reference_parsorder_noDIC.Rds │ ├── test_autojags.R │ ├── test_input_processing.R │ ├── test_jags.R │ ├── test_jagsbasic.R │ ├── test_mcmc_tools.R │ ├── test_plots.R │ ├── test_print.R │ ├── test_process_output.R │ ├── test_run_rjags.R │ ├── test_update.R │ ├── update_ref.Rds │ ├── update_ref_codaonly.Rds │ ├── update_ref_diffsaved.Rds │ └── update_ref_noDIC.Rds ├── man ├── autojags.Rd ├── densityplot.Rd ├── jags.Rd ├── jags_View.Rd ├── jagsbasic.Rd ├── ppcheck.Rd ├── traceplot.Rd ├── update.Rd └── whiskerplot.Rd ├── pkgdown └── extra.css ├── tests └── tinytest.R └── vignettes └── jagsUI.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kenkellner/jagsUI/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: 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