├── .Rbuildignore ├── .circleci └── config.yml ├── .gitignore ├── .travis.yml ├── CHANGELOG.md ├── DESCRIPTION ├── Meta └── vignette.rds ├── NAMESPACE ├── R ├── anchor.R ├── infer_intensities.R ├── simulate_factorization.R ├── update_simplex.R ├── update_unitary.R ├── update_volume.R ├── volnmf_estimate.R └── vpreprocess.R ├── README.md ├── doc ├── AnchorVolume.R ├── AnchorVolume.Rmd ├── AnchorVolume.html ├── AnchorVolume.md ├── volume_regularized_NMF.R ├── volume_regularized_NMF.Rmd ├── volume_regularized_NMF.html └── volume_regularized_NMF.md ├── man ├── AnchorFree.Rd ├── factor_intensities.Rd ├── infer_intensities.Rd ├── projection_onto_simplex.Rd ├── sim_factors.Rd ├── vol_preprocess.Rd ├── volnmf_det.Rd ├── volnmf_estimate.Rd ├── volnmf_logdet.Rd ├── volnmf_main.Rd ├── volnmf_procrustes.Rd ├── volnmf_simplex_col.Rd └── volnmf_simplex_row.Rd ├── tests ├── testthat.R └── testthat │ └── test_functions.R └── vrnmf.Rproj /.Rbuildignore: 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