├── README.md ├── data └── chestx │ ├── MeSH │ ├── original │ │ ├── openi.mesh │ │ ├── openi.mesh.overlap │ │ └── openi.mesh.top │ └── src │ │ ├── preprocess.py │ │ └── wordfreq.py │ └── ims │ └── README.md ├── doc └── egpaper_final_arxiv.pdf ├── imcnn ├── Csv.lua ├── README.md ├── models │ ├── googlenet_bn.lua │ ├── nin.lua │ ├── nin_bn.lua │ └── nin_bn_nodropout.lua ├── provider256.lua └── train256.lua ├── src └── chestx │ ├── generate_data.ipynb │ └── main.ipynb └── txtrnn ├── README.md ├── bleu.py ├── convert_gpu_cpu_checkpoint.lua ├── inspect_checkpoint.lua ├── model ├── GRU.lua ├── LSTM.lua └── RNN.lua ├── sample.lua ├── sample_for_next_iter.lua ├── train.lua └── util ├── CharSplitLMMinibatchLoader.lua ├── OneHot.lua ├── SpatialContrastiveNormalization__.lua ├── improvider.lua ├── misc.lua ├── model_utils.lua └── pca.lua /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/README.md -------------------------------------------------------------------------------- /data/chestx/MeSH/original/openi.mesh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/MeSH/original/openi.mesh -------------------------------------------------------------------------------- /data/chestx/MeSH/original/openi.mesh.overlap: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/MeSH/original/openi.mesh.overlap -------------------------------------------------------------------------------- /data/chestx/MeSH/original/openi.mesh.top: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/MeSH/original/openi.mesh.top -------------------------------------------------------------------------------- /data/chestx/MeSH/src/preprocess.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/MeSH/src/preprocess.py -------------------------------------------------------------------------------- /data/chestx/MeSH/src/wordfreq.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/MeSH/src/wordfreq.py -------------------------------------------------------------------------------- /data/chestx/ims/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/data/chestx/ims/README.md -------------------------------------------------------------------------------- /doc/egpaper_final_arxiv.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/doc/egpaper_final_arxiv.pdf -------------------------------------------------------------------------------- /imcnn/Csv.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/Csv.lua -------------------------------------------------------------------------------- /imcnn/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/README.md -------------------------------------------------------------------------------- /imcnn/models/googlenet_bn.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/models/googlenet_bn.lua -------------------------------------------------------------------------------- /imcnn/models/nin.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/models/nin.lua -------------------------------------------------------------------------------- /imcnn/models/nin_bn.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/models/nin_bn.lua -------------------------------------------------------------------------------- /imcnn/models/nin_bn_nodropout.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/models/nin_bn_nodropout.lua -------------------------------------------------------------------------------- /imcnn/provider256.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/provider256.lua -------------------------------------------------------------------------------- /imcnn/train256.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/imcnn/train256.lua -------------------------------------------------------------------------------- /src/chestx/generate_data.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/src/chestx/generate_data.ipynb -------------------------------------------------------------------------------- /src/chestx/main.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/src/chestx/main.ipynb -------------------------------------------------------------------------------- /txtrnn/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/README.md -------------------------------------------------------------------------------- /txtrnn/bleu.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/bleu.py -------------------------------------------------------------------------------- /txtrnn/convert_gpu_cpu_checkpoint.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/convert_gpu_cpu_checkpoint.lua -------------------------------------------------------------------------------- /txtrnn/inspect_checkpoint.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/inspect_checkpoint.lua -------------------------------------------------------------------------------- /txtrnn/model/GRU.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/model/GRU.lua -------------------------------------------------------------------------------- /txtrnn/model/LSTM.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/model/LSTM.lua -------------------------------------------------------------------------------- /txtrnn/model/RNN.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/model/RNN.lua -------------------------------------------------------------------------------- /txtrnn/sample.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/sample.lua -------------------------------------------------------------------------------- /txtrnn/sample_for_next_iter.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/sample_for_next_iter.lua -------------------------------------------------------------------------------- /txtrnn/train.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/train.lua -------------------------------------------------------------------------------- /txtrnn/util/CharSplitLMMinibatchLoader.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/CharSplitLMMinibatchLoader.lua -------------------------------------------------------------------------------- /txtrnn/util/OneHot.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/OneHot.lua -------------------------------------------------------------------------------- /txtrnn/util/SpatialContrastiveNormalization__.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/SpatialContrastiveNormalization__.lua -------------------------------------------------------------------------------- /txtrnn/util/improvider.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/improvider.lua -------------------------------------------------------------------------------- /txtrnn/util/misc.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/misc.lua -------------------------------------------------------------------------------- /txtrnn/util/model_utils.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/model_utils.lua -------------------------------------------------------------------------------- /txtrnn/util/pca.lua: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/khcs/learning-to-read/HEAD/txtrnn/util/pca.lua --------------------------------------------------------------------------------