├── .github └── workflows │ └── integration_test.yml ├── .gitignore ├── Dockerfile ├── LICENSE ├── README.md ├── celegans ├── __init__.py ├── clips.py ├── simulation.py └── transforms.py ├── deeptangle ├── __init__.py ├── checkpoints.py ├── dataset │ ├── __init__.py │ ├── dataset.py │ ├── io.py │ ├── pca.py │ └── transforms.py ├── forward.py ├── logger.py ├── metrics.py ├── model.py ├── predict.py ├── tracking.py ├── utils.py └── version.py ├── docker_run.sh ├── examples ├── README.md ├── detect.py └── track.py ├── gui ├── README.md ├── app.py └── requirements-gui.txt ├── requirements.txt ├── setup.py └── train.py /.github/workflows/integration_test.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/kirkegaardlab/deeptangle/HEAD/.github/workflows/integration_test.yml -------------------------------------------------------------------------------- /.gitignore: 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