├── README.md ├── scripts └── uppmax_runBESST_RNA.sh └── src ├── Contig.py ├── Contig.pyc ├── CreateGraph.py ├── CreateGraph.pyc ├── ExtendLargeScaffolds.py ├── ExtendLargeScaffolds.pyc ├── GapCalculator.py ├── GapCalculator.pyc ├── GenerateOutput.py ├── GenerateOutput.pyc ├── Main.py ├── MakeScaffolds.py ├── MakeScaffolds.pyc ├── Norm.py ├── Norm.pyc ├── Parameter.py ├── Parameter.pyc ├── SW-python ├── InMakeScaffolds.py ├── SW.py └── SW.pyc ├── Scaffold.py └── Scaffold.pyc /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ksahlin/BESST_RNA/HEAD/README.md -------------------------------------------------------------------------------- /scripts/uppmax_runBESST_RNA.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ksahlin/BESST_RNA/HEAD/scripts/uppmax_runBESST_RNA.sh 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