├── BRCA ├── A_BRCA_filtered_5000.mat ├── Celltree │ ├── script_BRCA_eval_polCellTree.m │ ├── script_BRCA_eval_sepCellTree.m │ ├── script_polCellTree.R │ └── script_sepCellTree.R ├── Kmeans │ ├── script_BRCA_polKmeans.m │ └── script_BRCA_sepKmeans.m ├── Monocle │ ├── script_BRCA_eval_polMonocle.m │ ├── script_BRCA_eval_sepMonocle.m │ ├── script_polMonocle.R │ └── script_sepMonocle.R ├── SC3 │ ├── script_BRCA_eval_polSC3.m │ ├── script_BRCA_eval_sepSC3.m │ ├── script_polSC3.R │ └── script_sepSC3.R ├── Seurat │ ├── script_BRCA_seurat_eval.m │ └── script_seurat.R └── scVDMC │ └── script_BRCA_scvdmc_sep.m ├── PBMC ├── A_samples.mat ├── BackSPIN │ └── script_backspin.m ├── CIDR │ ├── script_cidr.R │ └── script_eval_cidr.m ├── Celltree │ ├── script_celltree.R │ └── script_celltree_HC.m ├── DendroSplit │ ├── DendroSplit.py │ └── script_dendrosplit.m ├── ICGS │ └── script_icgs.m ├── Kmeans │ └── script_kmeans.m ├── Monocle │ ├── script_eval_monocle.m │ └── script_monocle.R ├── SC3 │ ├── 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