├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── R ├── load.R ├── makeGraphs.R ├── quackPrediction.R ├── sysdata.rda └── trainModel.R ├── README.md ├── data ├── InWeb3.RData ├── InWeb3_network.txt ├── SandersGenes.txt ├── pathwayClassHash.RData └── stringent853Pathways.RData ├── man ├── makeGraphs.Rd ├── quackPrediction.Rd └── trainModel.Rd └── quack.Rproj /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- 1 | YEAR: 2017 2 | COPYRIGHT HOLDER: Quack authors 3 | -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/load.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/R/load.R -------------------------------------------------------------------------------- /R/makeGraphs.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/R/makeGraphs.R -------------------------------------------------------------------------------- /R/quackPrediction.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/R/quackPrediction.R -------------------------------------------------------------------------------- /R/sysdata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/R/sysdata.rda -------------------------------------------------------------------------------- /R/trainModel.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/R/trainModel.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/README.md -------------------------------------------------------------------------------- /data/InWeb3.RData: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/data/InWeb3.RData -------------------------------------------------------------------------------- /data/InWeb3_network.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/data/InWeb3_network.txt -------------------------------------------------------------------------------- /data/SandersGenes.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/data/SandersGenes.txt -------------------------------------------------------------------------------- /data/pathwayClassHash.RData: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/data/pathwayClassHash.RData -------------------------------------------------------------------------------- /data/stringent853Pathways.RData: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/data/stringent853Pathways.RData -------------------------------------------------------------------------------- /man/makeGraphs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/man/makeGraphs.Rd -------------------------------------------------------------------------------- /man/quackPrediction.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/man/quackPrediction.Rd -------------------------------------------------------------------------------- /man/trainModel.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/man/trainModel.Rd -------------------------------------------------------------------------------- /quack.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lagelab/quack/HEAD/quack.Rproj --------------------------------------------------------------------------------