├── .gitignore ├── CONTRIBUTING.md ├── Dockerfile ├── Documentation_PyBioNetFit.pdf ├── LICENSE ├── README.md ├── docs ├── Logo1.png ├── Logo1.xcf ├── Makefile ├── _static │ ├── custom.css │ ├── header.jpg │ └── logo.png ├── _templates │ └── layout.html ├── advanced.rst ├── algorithm_development.rst ├── algorithms.rst ├── cluster.rst ├── conf.py ├── config.rst ├── config_keys.rst ├── examples.rst ├── index.rst ├── installation.rst ├── make.bat ├── modules │ ├── algorithms.rst │ ├── cluster.rst │ ├── config.rst │ ├── constraint.rst │ ├── data.rst │ ├── index.rst │ ├── objective.rst │ ├── parse.rst │ ├── printing.rst │ ├── pset.rst │ └── pybnf.rst ├── quickstart.rst ├── simplex.png └── troubleshooting.rst ├── examples ├── .gitignore ├── COVID19forecasting_aMCMC │ ├── Beantown │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m11.bngl │ │ ├── m11.conf │ │ ├── m11.exp │ │ └── m11.sh │ ├── BigApple │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m1.bngl │ │ ├── m1.conf │ │ ├── m1.exp │ │ └── m1.sh │ ├── BigD │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m4.bngl │ │ ├── m4.conf │ │ ├── m4.exp │ │ └── m4.sh │ ├── BrotherlyLove │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m8.bngl │ │ ├── m8.conf │ │ ├── m8.exp │ │ └── m8.sh │ ├── DC │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m6.bngl │ │ ├── m6.conf │ │ ├── m6.exp │ │ └── m6.sh │ ├── EmeraldCity │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m15.bngl │ │ ├── m15.conf │ │ ├── m15.exp │ │ └── m15.sh │ ├── Frisco │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m12.bngl │ │ ├── m12.conf │ │ ├── m12.exp │ │ └── m12.sh │ ├── HTown │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m5.bngl │ │ ├── m5.conf │ │ ├── m5.exp │ │ └── m5.sh │ ├── Hotlanta │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m9.bngl │ │ ├── m9.conf │ │ ├── m9.exp │ │ └── m9.sh │ ├── InlandEmpire │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m13.bngl │ │ ├── m13.conf │ │ ├── m13.exp │ │ └── m13.sh │ ├── LaLaLand │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m2.bngl │ │ ├── m2.conf │ │ ├── m2.exp │ │ └── m2.sh │ ├── MagicCity │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m7.bngl │ │ ├── m7.conf │ │ ├── m7.exp │ │ └── m7.sh │ ├── MotorCity │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m14.bngl │ │ ├── m14.conf │ │ ├── m14.exp │ │ └── m14.sh │ ├── README.txt │ ├── Valley_of_the_Sun │ │ ├── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── m10.bngl │ │ ├── m10.conf │ │ ├── m10.exp │ │ └── m10.sh │ └── WindyCity │ │ ├── m3.bngl │ │ ├── m3.conf │ │ ├── m3.exp │ │ ├── m3.sh │ │ └── m3Output │ │ └── adaptive_files │ │ ├── MLE_params.txt │ │ ├── diff.txt │ │ └── diffMatrix.txt ├── DataS1.zip ├── Degranulation_aMCMC │ ├── README.txt │ ├── degran_mcmc.sh │ ├── mcmc.conf │ ├── model.bngl │ ├── output │ │ └── mcmc │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── p1_5.exp │ ├── p3_120.exp │ ├── p3_240.exp │ ├── p3_30.exp │ ├── p3_5.exp │ └── p3_60.exp ├── HIVdynamics_aMCMC │ ├── README.txt │ ├── pt303 │ │ ├── pt303.bngl │ │ ├── pt303.conf │ │ ├── pt303.exp │ │ ├── pt303.sh │ │ └── pt303_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── pt403 │ │ ├── pt403.bngl │ │ ├── pt403.conf │ │ ├── pt403.exp │ │ ├── pt403.sh │ │ └── pt403_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ └── pt409 │ │ ├── pt409.bngl │ │ ├── pt409.conf │ │ ├── pt409.exp │ │ ├── pt409.sh │ │ └── pt409_output │ │ └── adaptive_files │ │ ├── MLE_params.txt │ │ ├── diff.txt │ │ └── diffMatrix.txt ├── LinearRegression_aMCMC │ ├── README.txt │ ├── linear.bngl │ ├── linear.exp │ ├── linear_am.conf │ ├── linear_am.sh │ ├── linear_mh.conf │ ├── linear_mh.sh │ └── output │ │ └── demo_bng │ │ └── adaptive_files │ │ ├── MLE_params.txt │ │ ├── diff.txt │ │ └── diffMatrix.txt ├── Mallela2021States │ ├── README.md │ └── SI_files │ │ ├── Alabama │ │ ├── Alabama.bngl │ │ ├── Alabama.conf │ │ ├── Alabama.exp │ │ └── Alabama_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Alaska │ │ ├── Alaska.bngl │ │ ├── Alaska.conf │ │ ├── Alaska.exp │ │ └── Alaska_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Arizona │ │ ├── Arizona.bngl │ │ ├── Arizona.conf │ │ ├── Arizona.exp │ │ └── Arizona_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Arkansas │ │ ├── Arkansas.bngl │ │ ├── Arkansas.conf │ │ ├── Arkansas.exp │ │ └── Arkansas_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── California │ │ ├── California.bngl │ │ ├── California.conf │ │ ├── California.exp │ │ └── California_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Colorado │ │ ├── Colorado.bngl │ │ ├── Colorado.conf │ │ ├── Colorado.exp │ │ └── Colorado_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Connecticut │ │ ├── Connecticut.bngl │ │ ├── Connecticut.conf │ │ ├── Connecticut.exp │ │ └── Connecticut_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Delaware │ │ ├── Delaware.bngl │ │ ├── Delaware.conf │ │ ├── Delaware.exp │ │ └── Delaware_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Florida │ │ ├── Florida.bngl │ │ ├── Florida.conf │ │ ├── Florida.exp │ │ └── Florida_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Georgia │ │ ├── Georgia.bngl │ │ ├── Georgia.conf │ │ ├── Georgia.exp │ │ └── Georgia_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Hawaii │ │ ├── Hawaii.bngl │ │ ├── Hawaii.conf │ │ ├── Hawaii.exp │ │ └── Hawaii_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Idaho │ │ ├── Idaho.bngl │ │ ├── Idaho.conf │ │ ├── Idaho.exp │ │ └── Idaho_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Illinois │ │ ├── Illinois.bngl │ │ ├── Illinois.conf │ │ ├── Illinois.exp │ │ └── Illinois_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Indiana │ │ ├── Indiana.bngl │ │ ├── Indiana.conf │ │ ├── Indiana.exp │ │ └── Indiana_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Iowa │ │ ├── Iowa.bngl │ │ ├── Iowa.conf │ │ ├── Iowa.exp │ │ └── Iowa_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Kansas │ │ ├── Kansas.bngl │ │ ├── Kansas.conf │ │ ├── Kansas.exp │ │ └── Kansas_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Kentucky │ │ ├── Kentucky.bngl │ │ ├── Kentucky.conf │ │ ├── Kentucky.exp │ │ └── Kentucky_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Louisiana │ │ ├── Louisiana.bngl │ │ ├── Louisiana.conf │ │ ├── Louisiana.exp │ │ └── Louisiana_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Maine │ │ ├── Maine.bngl │ │ ├── Maine.conf │ │ ├── Maine.exp │ │ └── Maine_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Maryland │ │ ├── Maryland.bngl │ │ ├── Maryland.conf │ │ ├── Maryland.exp │ │ └── Maryland_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Massachusetts │ │ ├── Massachusetts.bngl │ │ ├── Massachusetts.conf │ │ ├── Massachusetts.exp │ │ └── Massachusetts_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Michigan │ │ ├── Michigan.bngl │ │ ├── Michigan.conf │ │ ├── Michigan.exp │ │ └── Michigan_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Minnesota │ │ ├── Minnesota.bngl │ │ ├── Minnesota.conf │ │ ├── Minnesota.exp │ │ └── Minnesota_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Mississippi │ │ ├── Mississippi.bngl │ │ ├── Mississippi.conf │ │ ├── Mississippi.exp │ │ └── Mississippi_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Missouri │ │ ├── Missouri.bngl │ │ ├── Missouri.conf │ │ ├── Missouri.exp │ │ └── Missouri_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Montana │ │ ├── Montana.bngl │ │ ├── Montana.conf │ │ ├── Montana.exp │ │ └── Montana_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Nebraska │ │ ├── Nebraska.bngl │ │ ├── Nebraska.conf │ │ ├── Nebraska.exp │ │ └── Nebraska_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Nevada │ │ ├── Nevada.bngl │ │ ├── Nevada.conf │ │ ├── Nevada.exp │ │ └── Nevada_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NewHampshire │ │ ├── NewHampshire.bngl │ │ ├── NewHampshire.conf │ │ ├── NewHampshire.exp │ │ └── NewHampshire_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NewJersey │ │ ├── NewJersey.bngl │ │ ├── NewJersey.conf │ │ ├── NewJersey.exp │ │ └── NewJersey_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NewMexico │ │ ├── NewMexico.bngl │ │ ├── NewMexico.conf │ │ ├── NewMexico.exp │ │ └── NewMexico_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NewYork │ │ ├── NewYork.bngl │ │ ├── NewYork.conf │ │ ├── NewYork.exp │ │ └── NewYork_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NorthCarolina │ │ ├── NorthCarolina.bngl │ │ ├── NorthCarolina.conf │ │ ├── NorthCarolina.exp │ │ └── NorthCarolina_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── NorthDakota │ │ ├── NorthDakota.bngl │ │ ├── NorthDakota.conf │ │ ├── NorthDakota.exp │ │ └── NorthDakota_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Ohio │ │ ├── Ohio.bngl │ │ ├── Ohio.conf │ │ ├── Ohio.exp │ │ └── Ohio_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Oklahoma │ │ ├── Oklahoma.bngl │ │ ├── Oklahoma.conf │ │ ├── Oklahoma.exp │ │ └── Oklahoma_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Oregon │ │ ├── Oregon.bngl │ │ ├── Oregon.conf │ │ ├── Oregon.exp │ │ └── Oregon_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Pennsylvania │ │ ├── Pennsylvania.bngl │ │ ├── Pennsylvania.conf │ │ ├── Pennsylvania.exp │ │ └── Pennsylvania_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── RhodeIsland │ │ ├── RhodeIsland.bngl │ │ ├── RhodeIsland.conf │ │ ├── RhodeIsland.exp │ │ └── RhodeIsland_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── SouthCarolina │ │ ├── SouthCarolina.bngl │ │ ├── SouthCarolina.conf │ │ ├── SouthCarolina.exp │ │ └── SouthCarolina_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── SouthDakota │ │ ├── SouthDakota.bngl │ │ ├── SouthDakota.conf │ │ ├── SouthDakota.exp │ │ └── SouthDakota_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Tennessee │ │ ├── Tennessee.bngl │ │ ├── Tennessee.conf │ │ ├── Tennessee.exp │ │ └── Tennessee_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Texas │ │ ├── Texas.bngl │ │ ├── Texas.conf │ │ ├── Texas.exp │ │ └── Texas_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Utah │ │ ├── Utah.bngl │ │ ├── Utah.conf │ │ ├── Utah.exp │ │ └── Utah_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Vermont │ │ ├── Vermont.bngl │ │ ├── Vermont.conf │ │ ├── Vermont.exp │ │ └── Vermont_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Virginia │ │ ├── Virginia.bngl │ │ ├── Virginia.conf │ │ ├── Virginia.exp │ │ └── Virginia_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Washington │ │ ├── Washington.bngl │ │ ├── Washington.conf │ │ ├── Washington.exp │ │ └── Washington_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── WestVirginia │ │ ├── WestVirginia.bngl │ │ ├── WestVirginia.conf │ │ ├── WestVirginia.exp │ │ └── WestVirginia_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ ├── Wisconsin │ │ ├── Wisconsin.bngl │ │ ├── Wisconsin.conf │ │ ├── Wisconsin.exp │ │ └── Wisconsin_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ │ └── Wyoming │ │ ├── Wyoming.bngl │ │ ├── Wyoming.conf │ │ ├── Wyoming.exp │ │ └── Wyoming_output │ │ └── adaptive_files │ │ ├── MLE_params.txt │ │ ├── diff.txt │ │ └── diffMatrix.txt ├── Mallela2022MSAs │ ├── Abilene, TX │ │ ├── Abilene, TX.bngl │ │ ├── Abilene, TX.conf │ │ ├── Abilene, TX.exp │ │ └── Abilene, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Akron, OH │ │ ├── Akron, OH.bngl │ │ ├── Akron, OH.conf │ │ ├── Akron, OH.exp │ │ └── Akron, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Albany, GA │ │ ├── Albany, GA.bngl │ │ ├── Albany, GA.conf │ │ ├── Albany, GA.exp │ │ └── Albany, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Albany-Schenectady-Troy, NY │ │ ├── Albany-Schenectady-Troy, NY.bngl │ │ ├── Albany-Schenectady-Troy, NY.conf │ │ ├── Albany-Schenectady-Troy, NY.exp │ │ └── Albany-Schenectady-Troy, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Albuquerque, NM │ │ ├── Albuquerque, NM.bngl │ │ ├── Albuquerque, NM.conf │ │ ├── Albuquerque, NM.exp │ │ └── Albuquerque, NM_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Alexandria, LA │ │ ├── Alexandria, LA.bngl │ │ ├── Alexandria, LA.conf │ │ ├── Alexandria, LA.exp │ │ └── Alexandria, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Allentown-Bethlehem-Easton, PA-NJ │ │ ├── Allentown-Bethlehem-Easton, PA-NJ.bngl │ │ ├── Allentown-Bethlehem-Easton, PA-NJ.conf │ │ ├── Allentown-Bethlehem-Easton, PA-NJ.exp │ │ └── Allentown-Bethlehem-Easton, PA-NJ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Amarillo, TX │ │ ├── Amarillo, TX.bngl │ │ ├── Amarillo, TX.conf │ │ ├── Amarillo, TX.exp │ │ └── Amarillo, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Anchorage, AK │ │ ├── Anchorage, AK.bngl │ │ ├── Anchorage, AK.conf │ │ ├── Anchorage, AK.exp │ │ └── Anchorage, AK_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Ann Arbor, MI │ │ ├── Ann Arbor, MI.bngl │ │ ├── Ann Arbor, MI.conf │ │ ├── Ann Arbor, MI.exp │ │ └── Ann Arbor, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Appleton, WI │ │ ├── Appleton, WI.bngl │ │ ├── Appleton, WI.conf │ │ ├── Appleton, WI.exp │ │ └── Appleton, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Asheville, NC │ │ ├── Asheville, NC.bngl │ │ ├── Asheville, NC.conf │ │ ├── Asheville, NC.exp │ │ └── Asheville, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Athens-Clarke County, GA │ │ ├── Athens-Clarke County, GA.bngl │ │ ├── Athens-Clarke County, GA.conf │ │ ├── Athens-Clarke County, GA.exp │ │ └── Athens-Clarke County, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Atlanta-Sandy Springs-Alpharetta, GA │ │ ├── Atlanta-Sandy Springs-Alpharetta, GA.bngl │ │ ├── Atlanta-Sandy Springs-Alpharetta, GA.conf │ │ ├── Atlanta-Sandy Springs-Alpharetta, GA.exp │ │ └── Atlanta-Sandy Springs-Alpharetta, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Atlantic City-Hammonton, NJ │ │ ├── Atlantic City-Hammonton, NJ.bngl │ │ ├── Atlantic City-Hammonton, NJ.conf │ │ ├── Atlantic City-Hammonton, NJ.exp │ │ └── Atlantic City-Hammonton, NJ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Auburn-Opelika, AL │ │ ├── Auburn-Opelika, AL.bngl │ │ ├── Auburn-Opelika, AL.conf │ │ ├── Auburn-Opelika, AL.exp │ │ └── Auburn-Opelika, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Augusta-Richmond County, GA-SC │ │ ├── Augusta-Richmond County, GA-SC.bngl │ │ ├── Augusta-Richmond County, GA-SC.conf │ │ ├── Augusta-Richmond County, GA-SC.exp │ │ └── Augusta-Richmond County, GA-SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Austin-Round Rock, TX │ │ ├── Austin-Round Rock, TX.bngl │ │ ├── Austin-Round Rock, TX.conf │ │ ├── Austin-Round Rock, TX.exp │ │ └── Austin-Round Rock, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bakersfield, CA │ │ ├── Bakersfield, CA.bngl │ │ ├── Bakersfield, CA.conf │ │ ├── Bakersfield, CA.exp │ │ └── Bakersfield, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Baltimore-Columbia-Towson, MD │ │ ├── Baltimore-Columbia-Towson, MD.bngl │ │ ├── Baltimore-Columbia-Towson, MD.conf │ │ ├── Baltimore-Columbia-Towson, MD.exp │ │ └── Baltimore-Columbia-Towson, MD_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Barnstable Town, MA │ │ ├── Barnstable Town, MA.bngl │ │ ├── Barnstable Town, MA.conf │ │ ├── Barnstable Town, MA.exp │ │ └── Barnstable Town, MA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Baton Rouge, LA │ │ ├── Baton Rouge, LA.bngl │ │ ├── Baton Rouge, LA.conf │ │ ├── Baton Rouge, LA.exp │ │ └── Baton Rouge, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Battle Creek, MI │ │ ├── Battle Creek, MI.bngl │ │ ├── Battle Creek, MI.conf │ │ ├── Battle Creek, MI.exp │ │ └── Battle Creek, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bay City, MI │ │ ├── Bay City, MI.bngl │ │ ├── Bay City, MI.conf │ │ ├── Bay City, MI.exp │ │ └── Bay City, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Beaumont-Port Arthur, TX │ │ ├── Beaumont-Port Arthur, TX.bngl │ │ ├── Beaumont-Port Arthur, TX.conf │ │ ├── Beaumont-Port Arthur, TX.exp │ │ └── Beaumont-Port Arthur, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bellingham, WA │ │ ├── Bellingham, WA.bngl │ │ ├── Bellingham, WA.conf │ │ ├── Bellingham, WA.exp │ │ └── Bellingham, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Binghamton, NY │ │ ├── Binghamton, NY.bngl │ │ ├── Binghamton, NY.conf │ │ ├── Binghamton, NY.exp │ │ └── Binghamton, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Birmingham-Hoover, AL │ │ ├── Birmingham-Hoover, AL.bngl │ │ ├── Birmingham-Hoover, AL.conf │ │ ├── Birmingham-Hoover, AL.exp │ │ └── Birmingham-Hoover, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bloomington, IN │ │ ├── Bloomington, IN.bngl │ │ ├── Bloomington, IN.conf │ │ ├── Bloomington, IN.exp │ │ └── Bloomington, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bloomsburg-Berwick, PA │ │ ├── Bloomsburg-Berwick, PA.bngl │ │ ├── Bloomsburg-Berwick, PA.conf │ │ ├── Bloomsburg-Berwick, PA.exp │ │ └── Bloomsburg-Berwick, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Boise City, ID │ │ ├── Boise City, ID.bngl │ │ ├── Boise City, ID.conf │ │ ├── Boise City, ID.exp │ │ └── Boise City, ID_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Boston-Cambridge-Newton, MA-NH │ │ ├── Boston-Cambridge-Newton, MA-NH.bngl │ │ ├── Boston-Cambridge-Newton, MA-NH.conf │ │ ├── Boston-Cambridge-Newton, MA-NH.exp │ │ └── Boston-Cambridge-Newton, MA-NH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Boulder, CO │ │ ├── Boulder, CO.bngl │ │ ├── Boulder, CO.conf │ │ ├── Boulder, CO.exp │ │ └── Boulder, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bowling Green, KY │ │ ├── Bowling Green, KY.bngl │ │ ├── Bowling Green, KY.conf │ │ ├── Bowling Green, KY.exp │ │ └── Bowling Green, KY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Bridgeport-Stamford-Norwalk, CT │ │ ├── Bridgeport-Stamford-Norwalk, CT.bngl │ │ ├── Bridgeport-Stamford-Norwalk, CT.conf │ │ ├── Bridgeport-Stamford-Norwalk, CT.exp │ │ └── Bridgeport-Stamford-Norwalk, CT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Brownsville-Harlingen, TX │ │ ├── Brownsville-Harlingen, TX.bngl │ │ ├── Brownsville-Harlingen, TX.conf │ │ ├── Brownsville-Harlingen, TX.exp │ │ └── Brownsville-Harlingen, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Buffalo-Niagara Falls, NY │ │ ├── Buffalo-Niagara Falls, NY.bngl │ │ ├── Buffalo-Niagara Falls, NY.conf │ │ ├── Buffalo-Niagara Falls, NY.exp │ │ └── Buffalo-Niagara Falls, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Burlington, NC │ │ ├── Burlington, NC.bngl │ │ ├── Burlington, NC.conf │ │ ├── Burlington, NC.exp │ │ └── Burlington, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Burlington-South Burlington, VT │ │ ├── Burlington-South Burlington, VT.bngl │ │ ├── Burlington-South Burlington, VT.conf │ │ ├── Burlington-South Burlington, VT.exp │ │ └── Burlington-South Burlington, VT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── California-Lexington Park, MD │ │ ├── California-Lexington Park, MD.bngl │ │ ├── California-Lexington Park, MD.conf │ │ ├── California-Lexington Park, MD.exp │ │ └── California-Lexington Park, MD_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Canton-Massillon, OH │ │ ├── Canton-Massillon, OH.bngl │ │ ├── Canton-Massillon, OH.conf │ │ ├── Canton-Massillon, OH.exp │ │ └── Canton-Massillon, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Cape Coral-Fort Myers, FL │ │ ├── Cape Coral-Fort Myers, FL.bngl │ │ ├── Cape Coral-Fort Myers, FL.conf │ │ ├── Cape Coral-Fort Myers, FL.exp │ │ └── Cape Coral-Fort Myers, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Carbondale-Marion, IL │ │ ├── Carbondale-Marion, IL.bngl │ │ ├── Carbondale-Marion, IL.conf │ │ ├── Carbondale-Marion, IL.exp │ │ └── Carbondale-Marion, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Cedar Rapids, IA │ │ ├── Cedar Rapids, IA.bngl │ │ ├── Cedar Rapids, IA.conf │ │ ├── Cedar Rapids, IA.exp │ │ └── Cedar Rapids, IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Chambersburg-Waynesboro, PA │ │ ├── Chambersburg-Waynesboro, PA.bngl │ │ ├── Chambersburg-Waynesboro, PA.conf │ │ ├── Chambersburg-Waynesboro, PA.exp │ │ └── Chambersburg-Waynesboro, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Champaign-Urbana, IL │ │ ├── Champaign-Urbana, IL.bngl │ │ ├── Champaign-Urbana, IL.conf │ │ ├── Champaign-Urbana, IL.exp │ │ └── Champaign-Urbana, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Charleston, WV │ │ ├── Charleston, WV.bngl │ │ ├── Charleston, WV.conf │ │ ├── Charleston, WV.exp │ │ └── Charleston, WV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Charleston-North Charleston, SC │ │ ├── Charleston-North Charleston, SC.bngl │ │ ├── Charleston-North Charleston, SC.conf │ │ ├── Charleston-North Charleston, SC.exp │ │ └── Charleston-North Charleston, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Charlotte-Concord-Gastonia, NC-SC │ │ ├── Charlotte-Concord-Gastonia, NC-SC.bngl │ │ ├── Charlotte-Concord-Gastonia, NC-SC.conf │ │ ├── Charlotte-Concord-Gastonia, NC-SC.exp │ │ └── Charlotte-Concord-Gastonia, NC-SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Charlottesville, VA │ │ ├── Charlottesville, VA.bngl │ │ ├── Charlottesville, VA.conf │ │ ├── Charlottesville, VA.exp │ │ └── Charlottesville, VA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Chattanooga, TN-GA │ │ ├── Chattanooga, TN-GA.bngl │ │ ├── Chattanooga, TN-GA.conf │ │ ├── Chattanooga, TN-GA.exp │ │ └── Chattanooga, TN-GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Chicago-Naperville-Elgin, IL-IN-WI │ │ ├── Chicago-Naperville-Elgin, IL-IN-WI.bngl │ │ ├── Chicago-Naperville-Elgin, IL-IN-WI.conf │ │ ├── Chicago-Naperville-Elgin, IL-IN-WI.exp │ │ └── Chicago-Naperville-Elgin, IL-IN-WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Cincinnati, OH-KY-IN │ │ ├── Cincinnati, OH-KY-IN.bngl │ │ ├── Cincinnati, OH-KY-IN.conf │ │ ├── Cincinnati, OH-KY-IN.exp │ │ └── Cincinnati, OH-KY-IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Clarksville, TN-KY │ │ ├── Clarksville, TN-KY.bngl │ │ ├── Clarksville, TN-KY.conf │ │ ├── Clarksville, TN-KY.exp │ │ └── Clarksville, TN-KY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Cleveland-Elyria, OH │ │ ├── Cleveland-Elyria, OH.bngl │ │ ├── Cleveland-Elyria, OH.conf │ │ ├── Cleveland-Elyria, OH.exp │ │ └── Cleveland-Elyria, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── College Station-Bryan, TX │ │ ├── College Station-Bryan, TX.bngl │ │ ├── College Station-Bryan, TX.conf │ │ ├── College Station-Bryan, TX.exp │ │ └── College Station-Bryan, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Colorado Springs, CO │ │ ├── Colorado Springs, CO.bngl │ │ ├── Colorado Springs, CO.conf │ │ ├── Colorado Springs, CO.exp │ │ └── Colorado Springs, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Columbia, SC │ │ ├── Columbia, SC.bngl │ │ ├── Columbia, SC.conf │ │ ├── Columbia, SC.exp │ │ └── Columbia, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Columbus, GA-AL │ │ ├── Columbus, GA-AL.bngl │ │ ├── Columbus, GA-AL.conf │ │ ├── Columbus, GA-AL.exp │ │ └── Columbus, GA-AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Columbus, IN │ │ ├── Columbus, IN.bngl │ │ ├── Columbus, IN.conf │ │ ├── Columbus, IN.exp │ │ └── Columbus, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Columbus, OH │ │ ├── Columbus, OH.bngl │ │ ├── Columbus, OH.conf │ │ ├── Columbus, OH.exp │ │ └── Columbus, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Corpus Christi, TX │ │ ├── Corpus Christi, TX.bngl │ │ ├── Corpus Christi, TX.conf │ │ ├── Corpus Christi, TX.exp │ │ └── Corpus Christi, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Crestview-Fort Walton Beach-Destin, FL │ │ ├── Crestview-Fort Walton Beach-Destin, FL.bngl │ │ ├── Crestview-Fort Walton Beach-Destin, FL.conf │ │ ├── Crestview-Fort Walton Beach-Destin, FL.exp │ │ └── Crestview-Fort Walton Beach-Destin, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Cumberland, MD-WV │ │ ├── Cumberland, MD-WV.bngl │ │ ├── Cumberland, MD-WV.conf │ │ ├── Cumberland, MD-WV.exp │ │ └── Cumberland, MD-WV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dallas-Fort Worth-Arlington, TX │ │ ├── Dallas-Fort Worth-Arlington, TX.bngl │ │ ├── Dallas-Fort Worth-Arlington, TX.conf │ │ ├── Dallas-Fort Worth-Arlington, TX.exp │ │ └── Dallas-Fort Worth-Arlington, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dalton, GA │ │ ├── Dalton, GA.bngl │ │ ├── Dalton, GA.conf │ │ ├── Dalton, GA.exp │ │ └── Dalton, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Daphne-Fairhope-Foley, AL │ │ ├── Daphne-Fairhope-Foley, AL.bngl │ │ ├── Daphne-Fairhope-Foley, AL.conf │ │ ├── Daphne-Fairhope-Foley, AL.exp │ │ └── Daphne-Fairhope-Foley, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Davenport-Moline-Rock Island, IA-IL │ │ ├── Davenport-Moline-Rock Island, IA-IL.bngl │ │ ├── Davenport-Moline-Rock Island, IA-IL.conf │ │ ├── Davenport-Moline-Rock Island, IA-IL.exp │ │ └── Davenport-Moline-Rock Island, IA-IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dayton, OH │ │ ├── Dayton, OH.bngl │ │ ├── Dayton, OH.conf │ │ ├── Dayton, OH.exp │ │ └── Dayton, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Deltona-Daytona Beach-Ormond Beach, FL │ │ ├── Deltona-Daytona Beach-Ormond Beach, FL.bngl │ │ ├── Deltona-Daytona Beach-Ormond Beach, FL.conf │ │ ├── Deltona-Daytona Beach-Ormond Beach, FL.exp │ │ └── Deltona-Daytona Beach-Ormond Beach, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Denver-Aurora-Lakewood, CO │ │ ├── Denver-Aurora-Lakewood, CO.bngl │ │ ├── Denver-Aurora-Lakewood, CO.conf │ │ ├── Denver-Aurora-Lakewood, CO.exp │ │ └── Denver-Aurora-Lakewood, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Des Moines-West Des Moines, IA │ │ ├── Des Moines-West Des Moines, IA.bngl │ │ ├── Des Moines-West Des Moines, IA.conf │ │ ├── Des Moines-West Des Moines, IA.exp │ │ └── Des Moines-West Des Moines, IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Detroit–Warren–Dearborn, MI │ │ ├── Detroit–Warren–Dearborn, MI.bngl │ │ ├── Detroit–Warren–Dearborn, MI.conf │ │ ├── Detroit–Warren–Dearborn, MI.exp │ │ └── Detroit–Warren–Dearborn, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dothan, AL │ │ ├── Dothan, AL.bngl │ │ ├── Dothan, AL.conf │ │ ├── Dothan, AL.exp │ │ └── Dothan, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dover, DE │ │ ├── Dover, DE.bngl │ │ ├── Dover, DE.conf │ │ ├── Dover, DE.exp │ │ └── Dover, DE_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Dubuque, IA │ │ ├── Dubuque, IA.bngl │ │ ├── Dubuque, IA.conf │ │ ├── Dubuque, IA.exp │ │ └── Dubuque, IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Durham-Chapel Hill, NC │ │ ├── Durham-Chapel Hill, NC.bngl │ │ ├── Durham-Chapel Hill, NC.conf │ │ ├── Durham-Chapel Hill, NC.exp │ │ └── Durham-Chapel Hill, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── East Stroudsburg, PA │ │ ├── East Stroudsburg, PA.bngl │ │ ├── East Stroudsburg, PA.conf │ │ ├── East Stroudsburg, PA.exp │ │ └── East Stroudsburg, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── El Centro, CA │ │ ├── El Centro, CA.bngl │ │ ├── El Centro, CA.conf │ │ ├── El Centro, CA.exp │ │ └── El Centro, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── El Paso, TX │ │ ├── El Paso, TX.bngl │ │ ├── El Paso, TX.conf │ │ ├── El Paso, TX.exp │ │ └── El Paso, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Elkhart-Goshen, IN │ │ ├── Elkhart-Goshen, IN.bngl │ │ ├── Elkhart-Goshen, IN.conf │ │ ├── Elkhart-Goshen, IN.exp │ │ └── Elkhart-Goshen, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Evansville, IN-KY │ │ ├── Evansville, IN-KY.bngl │ │ ├── Evansville, IN-KY.conf │ │ ├── Evansville, IN-KY.exp │ │ └── Evansville, IN-KY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fargo, ND-MN │ │ ├── Fargo, ND-MN.bngl │ │ ├── Fargo, ND-MN.conf │ │ ├── Fargo, ND-MN.exp │ │ └── Fargo, ND-MN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Farmington, NM │ │ ├── Farmington, NM.bngl │ │ ├── Farmington, NM.conf │ │ ├── Farmington, NM.exp │ │ └── Farmington, NM_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fayetteville, NC │ │ ├── Fayetteville, NC.bngl │ │ ├── Fayetteville, NC.conf │ │ ├── Fayetteville, NC.exp │ │ └── Fayetteville, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fayetteville-Springdale-Rogers, AR │ │ ├── Fayetteville-Springdale-Rogers, AR.bngl │ │ ├── Fayetteville-Springdale-Rogers, AR.conf │ │ ├── Fayetteville-Springdale-Rogers, AR.exp │ │ └── Fayetteville-Springdale-Rogers, AR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Flagstaff, AZ │ │ ├── Flagstaff, AZ.bngl │ │ ├── Flagstaff, AZ.conf │ │ ├── Flagstaff, AZ.exp │ │ └── Flagstaff, AZ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Flint, MI │ │ ├── Flint, MI.bngl │ │ ├── Flint, MI.conf │ │ ├── Flint, MI.exp │ │ └── Flint, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Florence, SC │ │ ├── Florence, SC.bngl │ │ ├── Florence, SC.conf │ │ ├── Florence, SC.exp │ │ └── Florence, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Florence-Muscle Shoals, AL │ │ ├── Florence-Muscle Shoals, AL.bngl │ │ ├── Florence-Muscle Shoals, AL.conf │ │ ├── Florence-Muscle Shoals, AL.exp │ │ └── Florence-Muscle Shoals, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fort Collins, CO │ │ ├── Fort Collins, CO.bngl │ │ ├── Fort Collins, CO.conf │ │ ├── Fort Collins, CO.exp │ │ └── Fort Collins, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fort Wayne, IN │ │ ├── Fort Wayne, IN.bngl │ │ ├── Fort Wayne, IN.conf │ │ ├── Fort Wayne, IN.exp │ │ └── Fort Wayne, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Fresno, CA │ │ ├── Fresno, CA.bngl │ │ ├── Fresno, CA.conf │ │ ├── Fresno, CA.exp │ │ └── Fresno, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Gadsden, AL │ │ ├── Gadsden, AL.bngl │ │ ├── Gadsden, AL.conf │ │ ├── Gadsden, AL.exp │ │ └── Gadsden, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Gainesville, FL │ │ ├── Gainesville, FL.bngl │ │ ├── Gainesville, FL.conf │ │ ├── Gainesville, FL.exp │ │ └── Gainesville, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Gainesville, GA │ │ ├── Gainesville, GA.bngl │ │ ├── Gainesville, GA.conf │ │ ├── Gainesville, GA.exp │ │ └── Gainesville, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Glens Falls, NY │ │ ├── Glens Falls, NY.bngl │ │ ├── Glens Falls, NY.conf │ │ ├── Glens Falls, NY.exp │ │ └── Glens Falls, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Goldsboro, NC │ │ ├── Goldsboro, NC.bngl │ │ ├── Goldsboro, NC.conf │ │ ├── Goldsboro, NC.exp │ │ └── Goldsboro, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Grand Forks, ND-MN │ │ ├── Grand Forks, ND-MN.bngl │ │ ├── Grand Forks, ND-MN.conf │ │ ├── Grand Forks, ND-MN.exp │ │ └── Grand Forks, ND-MN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Grand Island, NE │ │ ├── Grand Island, NE.bngl │ │ ├── Grand Island, NE.conf │ │ ├── Grand Island, NE.exp │ │ └── Grand Island, NE_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Grand Rapids-Kentwood, MI │ │ ├── Grand Rapids-Kentwood, MI.bngl │ │ ├── Grand Rapids-Kentwood, MI.conf │ │ ├── Grand Rapids-Kentwood, MI.exp │ │ └── Grand Rapids-Kentwood, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Greeley, CO │ │ ├── Greeley, CO.bngl │ │ ├── Greeley, CO.conf │ │ ├── Greeley, CO.exp │ │ └── Greeley, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Green Bay, WI │ │ ├── Green Bay, WI.bngl │ │ ├── Green Bay, WI.conf │ │ ├── Green Bay, WI.exp │ │ └── Green Bay, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Greensboro-High Point, NC │ │ ├── Greensboro-High Point, NC.bngl │ │ ├── Greensboro-High Point, NC.conf │ │ ├── Greensboro-High Point, NC.exp │ │ └── Greensboro-High Point, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Greenville, NC │ │ ├── Greenville, NC.bngl │ │ ├── Greenville, NC.conf │ │ ├── Greenville, NC.exp │ │ └── Greenville, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Greenville-Anderson, SC │ │ ├── Greenville-Anderson, SC.bngl │ │ ├── Greenville-Anderson, SC.conf │ │ ├── Greenville-Anderson, SC.exp │ │ └── Greenville-Anderson, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Gulfport-Biloxi, MS │ │ ├── Gulfport-Biloxi, MS.bngl │ │ ├── Gulfport-Biloxi, MS.conf │ │ ├── Gulfport-Biloxi, MS.exp │ │ └── Gulfport-Biloxi, MS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hagerstown-Martinsburg, MD-WV │ │ ├── Hagerstown-Martinsburg, MD-WV.bngl │ │ ├── Hagerstown-Martinsburg, MD-WV.conf │ │ ├── Hagerstown-Martinsburg, MD-WV.exp │ │ └── Hagerstown-Martinsburg, MD-WV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hammond, LA │ │ ├── Hammond, LA.bngl │ │ ├── Hammond, LA.conf │ │ ├── Hammond, LA.exp │ │ └── Hammond, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hanford-Corcoran, CA │ │ ├── Hanford-Corcoran, CA.bngl │ │ ├── Hanford-Corcoran, CA.conf │ │ ├── Hanford-Corcoran, CA.exp │ │ └── Hanford-Corcoran, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Harrisburg-Carlisle, PA │ │ ├── Harrisburg-Carlisle, PA.bngl │ │ ├── Harrisburg-Carlisle, PA.conf │ │ ├── Harrisburg-Carlisle, PA.exp │ │ └── Harrisburg-Carlisle, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Harrisonburg, VA │ │ ├── Harrisonburg, VA.bngl │ │ ├── Harrisonburg, VA.conf │ │ ├── Harrisonburg, VA.exp │ │ └── Harrisonburg, VA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hartford-East Hartford-Middletown, CT │ │ ├── Hartford-East Hartford-Middletown, CT.bngl │ │ ├── Hartford-East Hartford-Middletown, CT.conf │ │ ├── Hartford-East Hartford-Middletown, CT.exp │ │ └── Hartford-East Hartford-Middletown, CT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hattiesburg, MS │ │ ├── Hattiesburg, MS.bngl │ │ ├── Hattiesburg, MS.conf │ │ ├── Hattiesburg, MS.exp │ │ └── Hattiesburg, MS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hickory-Lenoir-Morganton, NC │ │ ├── Hickory-Lenoir-Morganton, NC.bngl │ │ ├── Hickory-Lenoir-Morganton, NC.conf │ │ ├── Hickory-Lenoir-Morganton, NC.exp │ │ └── Hickory-Lenoir-Morganton, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Hilton Head Island-Bluffton-Beaufort, SC │ │ ├── Hilton Head Island-Bluffton-Beaufort, SC.bngl │ │ ├── Hilton Head Island-Bluffton-Beaufort, SC.conf │ │ ├── Hilton Head Island-Bluffton-Beaufort, SC.exp │ │ └── Hilton Head Island-Bluffton-Beaufort, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Houma-Thibodaux, LA │ │ ├── Houma-Thibodaux, LA.bngl │ │ ├── Houma-Thibodaux, LA.conf │ │ ├── Houma-Thibodaux, LA.exp │ │ └── Houma-Thibodaux, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Houston-The Woodlands-Sugar Land, TX │ │ ├── Houston-The Woodlands-Sugar Land, TX.bngl │ │ ├── Houston-The Woodlands-Sugar Land, TX.conf │ │ ├── Houston-The Woodlands-Sugar Land, TX.exp │ │ └── Houston-The Woodlands-Sugar Land, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Huntington-Ashland, WV-KY-OH │ │ ├── Huntington-Ashland, WV-KY-OH.bngl │ │ ├── Huntington-Ashland, WV-KY-OH.conf │ │ ├── Huntington-Ashland, WV-KY-OH.exp │ │ └── Huntington-Ashland, WV-KY-OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Huntsville, AL │ │ ├── Huntsville, AL.bngl │ │ ├── Huntsville, AL.conf │ │ ├── Huntsville, AL.exp │ │ └── Huntsville, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Indianapolis-Carmel-Anderson, IN │ │ ├── Indianapolis-Carmel-Anderson, IN.bngl │ │ ├── Indianapolis-Carmel-Anderson, IN.conf │ │ ├── Indianapolis-Carmel-Anderson, IN.exp │ │ └── Indianapolis-Carmel-Anderson, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Iowa City, IA │ │ ├── Iowa City, IA.bngl │ │ ├── Iowa City, IA.conf │ │ ├── Iowa City, IA.exp │ │ └── Iowa City, IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Jackson, MI │ │ ├── Jackson, MI.bngl │ │ ├── Jackson, MI.conf │ │ ├── Jackson, MI.exp │ │ └── Jackson, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Jackson, MS │ │ ├── Jackson, MS.bngl │ │ ├── Jackson, MS.conf │ │ ├── Jackson, MS.exp │ │ └── Jackson, MS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Jacksonville, FL │ │ ├── Jacksonville, FL.bngl │ │ ├── Jacksonville, FL.conf │ │ ├── Jacksonville, FL.exp │ │ └── Jacksonville, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Janesville-Beloit, WI │ │ ├── Janesville-Beloit, WI.bngl │ │ ├── Janesville-Beloit, WI.conf │ │ ├── Janesville-Beloit, WI.exp │ │ └── Janesville-Beloit, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kalamazoo-Portage, MI │ │ ├── Kalamazoo-Portage, MI.bngl │ │ ├── Kalamazoo-Portage, MI.conf │ │ ├── Kalamazoo-Portage, MI.exp │ │ └── Kalamazoo-Portage, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kankakee, IL │ │ ├── Kankakee, IL.bngl │ │ ├── Kankakee, IL.conf │ │ ├── Kankakee, IL.exp │ │ └── Kankakee, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kansas City, MO-KS │ │ ├── Kansas City, MO-KS.bngl │ │ ├── Kansas City, MO-KS.conf │ │ ├── Kansas City, MO-KS.exp │ │ └── Kansas City, MO-KS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kennewick-Richland, WA │ │ ├── Kennewick-Richland, WA.bngl │ │ ├── Kennewick-Richland, WA.conf │ │ ├── Kennewick-Richland, WA.exp │ │ └── Kennewick-Richland, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Killeen-Temple, TX │ │ ├── Killeen-Temple, TX.bngl │ │ ├── Killeen-Temple, TX.conf │ │ ├── Killeen-Temple, TX.exp │ │ └── Killeen-Temple, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kingston, NY │ │ ├── Kingston, NY.bngl │ │ ├── Kingston, NY.conf │ │ ├── Kingston, NY.exp │ │ └── Kingston, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Knoxville, TN │ │ ├── Knoxville, TN.bngl │ │ ├── Knoxville, TN.conf │ │ ├── Knoxville, TN.exp │ │ └── Knoxville, TN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Kokomo, IN │ │ ├── Kokomo, IN.bngl │ │ ├── Kokomo, IN.conf │ │ ├── Kokomo, IN.exp │ │ └── Kokomo, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lafayette, LA │ │ ├── Lafayette, LA.bngl │ │ ├── Lafayette, LA.conf │ │ ├── Lafayette, LA.exp │ │ └── Lafayette, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lafayette-West Lafayette, IN │ │ ├── Lafayette-West Lafayette, IN.bngl │ │ ├── Lafayette-West Lafayette, IN.conf │ │ ├── Lafayette-West Lafayette, IN.exp │ │ └── Lafayette-West Lafayette, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lake Charles, LA │ │ ├── Lake Charles, LA.bngl │ │ ├── Lake Charles, LA.conf │ │ ├── Lake Charles, LA.exp │ │ └── Lake Charles, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lake Havasu City-Kingman, AZ │ │ ├── Lake Havasu City-Kingman, AZ.bngl │ │ ├── Lake Havasu City-Kingman, AZ.conf │ │ ├── Lake Havasu City-Kingman, AZ.exp │ │ └── Lake Havasu City-Kingman, AZ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lakeland-Winter Haven, FL │ │ ├── Lakeland-Winter Haven, FL.bngl │ │ ├── Lakeland-Winter Haven, FL.conf │ │ ├── Lakeland-Winter Haven, FL.exp │ │ └── Lakeland-Winter Haven, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lancaster, PA │ │ ├── Lancaster, PA.bngl │ │ ├── Lancaster, PA.conf │ │ ├── Lancaster, PA.exp │ │ └── Lancaster, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lansing-East Lansing, MI │ │ ├── Lansing-East Lansing, MI.bngl │ │ ├── Lansing-East Lansing, MI.conf │ │ ├── Lansing-East Lansing, MI.exp │ │ └── Lansing-East Lansing, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Laredo, TX │ │ ├── Laredo, TX.bngl │ │ ├── Laredo, TX.conf │ │ ├── Laredo, TX.exp │ │ └── Laredo, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Las Cruces, NM │ │ ├── Las Cruces, NM.bngl │ │ ├── Las Cruces, NM.conf │ │ ├── Las Cruces, NM.exp │ │ └── Las Cruces, NM_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Las Vegas-Henderson-Paradise, NV │ │ ├── Las Vegas-Henderson-Paradise, NV.bngl │ │ ├── Las Vegas-Henderson-Paradise, NV.conf │ │ ├── Las Vegas-Henderson-Paradise, NV.exp │ │ └── Las Vegas-Henderson-Paradise, NV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lawton, OK │ │ ├── Lawton, OK.bngl │ │ ├── Lawton, OK.conf │ │ ├── Lawton, OK.exp │ │ └── Lawton, OK_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lebanon, PA │ │ ├── Lebanon, PA.bngl │ │ ├── Lebanon, PA.conf │ │ ├── Lebanon, PA.exp │ │ └── Lebanon, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lexington-Fayette, KY │ │ ├── Lexington-Fayette, KY.bngl │ │ ├── Lexington-Fayette, KY.conf │ │ ├── Lexington-Fayette, KY.exp │ │ └── Lexington-Fayette, KY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lincoln, NE │ │ ├── Lincoln, NE.bngl │ │ ├── Lincoln, NE.conf │ │ ├── Lincoln, NE.exp │ │ └── Lincoln, NE_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Little Rock-North Little Rock-Conway, AR │ │ ├── Little Rock-North Little Rock-Conway, AR.bngl │ │ ├── Little Rock-North Little Rock-Conway, AR.conf │ │ ├── Little Rock-North Little Rock-Conway, AR.exp │ │ └── Little Rock-North Little Rock-Conway, AR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Longview, TX │ │ ├── Longview, TX.bngl │ │ ├── Longview, TX.conf │ │ ├── Longview, TX.exp │ │ └── Longview, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Los Angeles-Long Beach-Anaheim, CA │ │ ├── Los Angeles-Long Beach-Anaheim, CA.bngl │ │ ├── Los Angeles-Long Beach-Anaheim, CA.conf │ │ ├── Los Angeles-Long Beach-Anaheim, CA.exp │ │ └── Los Angeles-Long Beach-Anaheim, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Louisville │ │ └── Jefferson County, KY-IN │ │ │ └── Louisville │ │ │ ├── Jefferson County, KY-IN.bngl │ │ │ ├── Jefferson County, KY-IN.conf │ │ │ ├── Jefferson County, KY-IN.exp │ │ │ └── Jefferson County, KY-IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Lubbock, TX │ │ ├── Lubbock, TX.bngl │ │ ├── Lubbock, TX.conf │ │ ├── Lubbock, TX.exp │ │ └── Lubbock, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Macon-Bibb County, GA │ │ ├── Macon-Bibb County, GA.bngl │ │ ├── Macon-Bibb County, GA.conf │ │ ├── Macon-Bibb County, GA.exp │ │ └── Macon-Bibb County, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Madison, WI │ │ ├── Madison, WI.bngl │ │ ├── Madison, WI.conf │ │ ├── Madison, WI.exp │ │ └── Madison, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Manchester-Nashua, NH │ │ ├── Manchester-Nashua, NH.bngl │ │ ├── Manchester-Nashua, NH.conf │ │ ├── Manchester-Nashua, NH.exp │ │ └── Manchester-Nashua, NH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── McAllen-Edinburg-Mission, TX │ │ ├── McAllen-Edinburg-Mission, TX.bngl │ │ ├── McAllen-Edinburg-Mission, TX.conf │ │ ├── McAllen-Edinburg-Mission, TX.exp │ │ └── McAllen-Edinburg-Mission, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Memphis, TN-MS-AR │ │ ├── Memphis, TN-MS-AR.bngl │ │ ├── Memphis, TN-MS-AR.conf │ │ ├── Memphis, TN-MS-AR.exp │ │ └── Memphis, TN-MS-AR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Merced, CA │ │ ├── Merced, CA.bngl │ │ ├── Merced, CA.conf │ │ ├── Merced, CA.exp │ │ └── Merced, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Miami-Fort Lauderdale-West Palm Beach, FL │ │ ├── Miami-Fort Lauderdale-West Palm Beach, FL.bngl │ │ ├── Miami-Fort Lauderdale-West Palm Beach, FL.conf │ │ ├── Miami-Fort Lauderdale-West Palm Beach, FL.exp │ │ └── Miami-Fort Lauderdale-West Palm Beach, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Michigan City-La Porte, IN │ │ ├── Michigan City-La Porte, IN.bngl │ │ ├── Michigan City-La Porte, IN.conf │ │ ├── Michigan City-La Porte, IN.exp │ │ └── Michigan City-La Porte, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Milwaukee-Waukesha, WI │ │ ├── Milwaukee-Waukesha, WI.bngl │ │ ├── Milwaukee-Waukesha, WI.conf │ │ ├── Milwaukee-Waukesha, WI.exp │ │ └── Milwaukee-Waukesha, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Minneapolis-St. Paul-Bloomington, MN-WI │ │ ├── Minneapolis-St. Paul-Bloomington, MN-WI.bngl │ │ ├── Minneapolis-St. Paul-Bloomington, MN-WI.conf │ │ ├── Minneapolis-St. Paul-Bloomington, MN-WI.exp │ │ └── Minneapolis-St. Paul-Bloomington, MN-WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Mobile, AL │ │ ├── Mobile, AL.bngl │ │ ├── Mobile, AL.conf │ │ ├── Mobile, AL.exp │ │ └── Mobile, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Modesto, CA │ │ ├── Modesto, CA.bngl │ │ ├── Modesto, CA.conf │ │ ├── Modesto, CA.exp │ │ └── Modesto, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Monroe, LA │ │ ├── Monroe, LA.bngl │ │ ├── Monroe, LA.conf │ │ ├── Monroe, LA.exp │ │ └── Monroe, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Monroe, MI │ │ ├── Monroe, MI.bngl │ │ ├── Monroe, MI.conf │ │ ├── Monroe, MI.exp │ │ └── Monroe, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Montgomery, AL │ │ ├── Montgomery, AL.bngl │ │ ├── Montgomery, AL.conf │ │ ├── Montgomery, AL.exp │ │ └── Montgomery, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Mount Vernon-Anacortes, WA │ │ ├── Mount Vernon-Anacortes, WA.bngl │ │ ├── Mount Vernon-Anacortes, WA.conf │ │ ├── Mount Vernon-Anacortes, WA.exp │ │ └── Mount Vernon-Anacortes, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Muncie, IN │ │ ├── Muncie, IN.bngl │ │ ├── Muncie, IN.conf │ │ ├── Muncie, IN.exp │ │ └── Muncie, IN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Muskegon, MI │ │ ├── Muskegon, MI.bngl │ │ ├── Muskegon, MI.conf │ │ ├── Muskegon, MI.exp │ │ └── Muskegon, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Myrtle Beach-Conway-North Myrtle Beach, SC-NC │ │ ├── Myrtle Beach-Conway-North Myrtle Beach, SC-NC.bngl │ │ ├── Myrtle Beach-Conway-North Myrtle Beach, SC-NC.conf │ │ ├── Myrtle Beach-Conway-North Myrtle Beach, SC-NC.exp │ │ └── Myrtle Beach-Conway-North Myrtle Beach, SC-NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Naples-Marco Island, FL │ │ ├── Naples-Marco Island, FL.bngl │ │ ├── Naples-Marco Island, FL.conf │ │ ├── Naples-Marco Island, FL.exp │ │ └── Naples-Marco Island, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Nashville-Davidson–Murfreesboro–Franklin, TN │ │ ├── Nashville-Davidson–Murfreesboro–Franklin, TN.bngl │ │ ├── Nashville-Davidson–Murfreesboro–Franklin, TN.conf │ │ ├── Nashville-Davidson–Murfreesboro–Franklin, TN.exp │ │ └── Nashville-Davidson–Murfreesboro–Franklin, TN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── New Haven-Milford, CT │ │ ├── New Haven-Milford, CT.bngl │ │ ├── New Haven-Milford, CT.conf │ │ ├── New Haven-Milford, CT.exp │ │ └── New Haven-Milford, CT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── New Orleans-Metairie, LA │ │ ├── New Orleans-Metairie, LA.bngl │ │ ├── New Orleans-Metairie, LA.conf │ │ ├── New Orleans-Metairie, LA.exp │ │ └── New Orleans-Metairie, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── New York-Newark-Jersey City, NY-NJ-PA │ │ ├── New York-Newark-Jersey City, NY-NJ-PA.bngl │ │ ├── New York-Newark-Jersey City, NY-NJ-PA.conf │ │ ├── New York-Newark-Jersey City, NY-NJ-PA.exp │ │ └── New York-Newark-Jersey City, NY-NJ-PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Niles, MI │ │ ├── Niles, MI.bngl │ │ ├── Niles, MI.conf │ │ ├── Niles, MI.exp │ │ └── Niles, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── North Port-Sarasota-Bradenton, FL │ │ ├── North Port-Sarasota-Bradenton, FL.bngl │ │ ├── North Port-Sarasota-Bradenton, FL.conf │ │ ├── North Port-Sarasota-Bradenton, FL.exp │ │ └── North Port-Sarasota-Bradenton, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Norwich-New London, CT │ │ ├── Norwich-New London, CT.bngl │ │ ├── Norwich-New London, CT.conf │ │ ├── Norwich-New London, CT.exp │ │ └── Norwich-New London, CT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Ocala, FL │ │ ├── Ocala, FL.bngl │ │ ├── Ocala, FL.conf │ │ ├── Ocala, FL.exp │ │ └── Ocala, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Ocean City, NJ │ │ ├── Ocean City, NJ.bngl │ │ ├── Ocean City, NJ.conf │ │ ├── Ocean City, NJ.exp │ │ └── Ocean City, NJ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Ogden-Clearfield, UT │ │ ├── Ogden-Clearfield, UT.bngl │ │ ├── Ogden-Clearfield, UT.conf │ │ ├── Ogden-Clearfield, UT.exp │ │ └── Ogden-Clearfield, UT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Oklahoma City, OK │ │ ├── Oklahoma City, OK.bngl │ │ ├── Oklahoma City, OK.conf │ │ ├── Oklahoma City, OK.exp │ │ └── Oklahoma City, OK_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Omaha-Council Bluffs, NE-IA │ │ ├── Omaha-Council Bluffs, NE-IA.bngl │ │ ├── Omaha-Council Bluffs, NE-IA.conf │ │ ├── Omaha-Council Bluffs, NE-IA.exp │ │ └── Omaha-Council Bluffs, NE-IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Orlando-Kissimmee-Sanford, FL │ │ ├── Orlando-Kissimmee-Sanford, FL.bngl │ │ ├── Orlando-Kissimmee-Sanford, FL.conf │ │ ├── Orlando-Kissimmee-Sanford, FL.exp │ │ └── Orlando-Kissimmee-Sanford, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Owensboro, KY │ │ ├── Owensboro, KY.bngl │ │ ├── Owensboro, KY.conf │ │ ├── Owensboro, KY.exp │ │ └── Owensboro, KY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Oxnard-Thousand Oaks-Ventura, CA │ │ ├── Oxnard-Thousand Oaks-Ventura, CA.bngl │ │ ├── Oxnard-Thousand Oaks-Ventura, CA.conf │ │ ├── Oxnard-Thousand Oaks-Ventura, CA.exp │ │ └── Oxnard-Thousand Oaks-Ventura, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Palm Bay-Melbourne-Titusville, FL │ │ ├── Palm Bay-Melbourne-Titusville, FL.bngl │ │ ├── Palm Bay-Melbourne-Titusville, FL.conf │ │ ├── Palm Bay-Melbourne-Titusville, FL.exp │ │ └── Palm Bay-Melbourne-Titusville, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Pensacola-Ferry Pass-Brent, FL │ │ ├── Pensacola-Ferry Pass-Brent, FL.bngl │ │ ├── Pensacola-Ferry Pass-Brent, FL.conf │ │ ├── Pensacola-Ferry Pass-Brent, FL.exp │ │ └── Pensacola-Ferry Pass-Brent, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Peoria, IL │ │ ├── Peoria, IL.bngl │ │ ├── Peoria, IL.conf │ │ ├── Peoria, IL.exp │ │ └── Peoria, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Philadelphia-Camden-Wilmington, PA-NJ-DE-MD │ │ ├── Philadelphia-Camden-Wilmington, PA-NJ-DE-MD.bngl │ │ ├── Philadelphia-Camden-Wilmington, PA-NJ-DE-MD.conf │ │ ├── Philadelphia-Camden-Wilmington, PA-NJ-DE-MD.exp │ │ └── Philadelphia-Camden-Wilmington, PA-NJ-DE-MD_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Phoenix-Mesa-Chandler, AZ │ │ ├── Phoenix-Mesa-Chandler, AZ.bngl │ │ ├── Phoenix-Mesa-Chandler, AZ.conf │ │ ├── Phoenix-Mesa-Chandler, AZ.exp │ │ └── Phoenix-Mesa-Chandler, AZ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Pine Bluff, AR │ │ ├── Pine Bluff, AR.bngl │ │ ├── Pine Bluff, AR.conf │ │ ├── Pine Bluff, AR.exp │ │ └── Pine Bluff, AR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Pittsburgh, PA │ │ ├── Pittsburgh, PA.bngl │ │ ├── Pittsburgh, PA.conf │ │ ├── Pittsburgh, PA.exp │ │ └── Pittsburgh, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Pittsfield, MA │ │ ├── Pittsfield, MA.bngl │ │ ├── Pittsfield, MA.conf │ │ ├── Pittsfield, MA.exp │ │ └── Pittsfield, MA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Port St. Lucie, FL │ │ ├── Port St. Lucie, FL.bngl │ │ ├── Port St. Lucie, FL.conf │ │ ├── Port St. Lucie, FL.exp │ │ └── Port St. Lucie, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Portland-South Portland, ME │ │ ├── Portland-South Portland, ME.bngl │ │ ├── Portland-South Portland, ME.conf │ │ ├── Portland-South Portland, ME.exp │ │ └── Portland-South Portland, ME_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Portland-Vancouver-Hillsboro, OR-WA │ │ ├── Portland-Vancouver-Hillsboro, OR-WA.bngl │ │ ├── Portland-Vancouver-Hillsboro, OR-WA.conf │ │ ├── Portland-Vancouver-Hillsboro, OR-WA.exp │ │ └── Portland-Vancouver-Hillsboro, OR-WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Poughkeepsie-Newburgh-Middletown, NY │ │ ├── Poughkeepsie-Newburgh-Middletown, NY.bngl │ │ ├── Poughkeepsie-Newburgh-Middletown, NY.conf │ │ ├── Poughkeepsie-Newburgh-Middletown, NY.exp │ │ └── Poughkeepsie-Newburgh-Middletown, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Prescott Valley-Prescott, AZ │ │ ├── Prescott Valley-Prescott, AZ.bngl │ │ ├── Prescott Valley-Prescott, AZ.conf │ │ ├── Prescott Valley-Prescott, AZ.exp │ │ └── Prescott Valley-Prescott, AZ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Providence-Warwick, RI-MA │ │ ├── Providence-Warwick, RI-MA.bngl │ │ ├── Providence-Warwick, RI-MA.conf │ │ ├── Providence-Warwick, RI-MA.exp │ │ └── Providence-Warwick, RI-MA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Provo-Orem, UT │ │ ├── Provo-Orem, UT.bngl │ │ ├── Provo-Orem, UT.conf │ │ ├── Provo-Orem, UT.exp │ │ └── Provo-Orem, UT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Pueblo, CO │ │ ├── Pueblo, CO.bngl │ │ ├── Pueblo, CO.conf │ │ ├── Pueblo, CO.exp │ │ └── Pueblo, CO_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Punta Gorda, FL │ │ ├── Punta Gorda, FL.bngl │ │ ├── Punta Gorda, FL.conf │ │ ├── Punta Gorda, FL.exp │ │ └── Punta Gorda, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── README.md │ ├── Racine, WI │ │ ├── Racine, WI.bngl │ │ ├── Racine, WI.conf │ │ ├── Racine, WI.exp │ │ └── Racine, WI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Raleigh-Cary, NC │ │ ├── Raleigh-Cary, NC.bngl │ │ ├── Raleigh-Cary, NC.conf │ │ ├── Raleigh-Cary, NC.exp │ │ └── Raleigh-Cary, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Reading, PA │ │ ├── Reading, PA.bngl │ │ ├── Reading, PA.conf │ │ ├── Reading, PA.exp │ │ └── Reading, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Reno, NV │ │ ├── Reno, NV.bngl │ │ ├── Reno, NV.conf │ │ ├── Reno, NV.exp │ │ └── Reno, NV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Richmond, VA │ │ ├── Richmond, VA.bngl │ │ ├── Richmond, VA.conf │ │ ├── Richmond, VA.exp │ │ └── Richmond, VA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Riverside-San Bernardino-Ontario, CA │ │ ├── Riverside-San Bernardino-Ontario, CA.bngl │ │ ├── Riverside-San Bernardino-Ontario, CA.conf │ │ ├── Riverside-San Bernardino-Ontario, CA.exp │ │ └── Riverside-San Bernardino-Ontario, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Roanoke, VA │ │ ├── Roanoke, VA.bngl │ │ ├── Roanoke, VA.conf │ │ ├── Roanoke, VA.exp │ │ └── Roanoke, VA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Rochester, MN │ │ ├── Rochester, MN.bngl │ │ ├── Rochester, MN.conf │ │ ├── Rochester, MN.exp │ │ └── Rochester, MN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Rochester, NY │ │ ├── Rochester, NY.bngl │ │ ├── Rochester, NY.conf │ │ ├── Rochester, NY.exp │ │ └── Rochester, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Rockford, IL │ │ ├── Rockford, IL.bngl │ │ ├── Rockford, IL.conf │ │ ├── Rockford, IL.exp │ │ └── Rockford, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Rocky Mount, NC │ │ ├── Rocky Mount, NC.bngl │ │ ├── Rocky Mount, NC.conf │ │ ├── Rocky Mount, NC.exp │ │ └── Rocky Mount, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Rome, GA │ │ ├── Rome, GA.bngl │ │ ├── Rome, GA.conf │ │ ├── Rome, GA.exp │ │ └── Rome, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Sacramento-Roseville-Folsom, CA │ │ ├── Sacramento-Roseville-Folsom, CA.bngl │ │ ├── Sacramento-Roseville-Folsom, CA.conf │ │ ├── Sacramento-Roseville-Folsom, CA.exp │ │ └── Sacramento-Roseville-Folsom, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Saginaw, MI │ │ ├── Saginaw, MI.bngl │ │ ├── Saginaw, MI.conf │ │ ├── Saginaw, MI.exp │ │ └── Saginaw, MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Salem, OR │ │ ├── Salem, OR.bngl │ │ ├── Salem, OR.conf │ │ ├── Salem, OR.exp │ │ └── Salem, OR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Salinas, CA │ │ ├── Salinas, CA.bngl │ │ ├── Salinas, CA.conf │ │ ├── Salinas, CA.exp │ │ └── Salinas, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Salisbury, MD-DE │ │ ├── Salisbury, MD-DE.bngl │ │ ├── Salisbury, MD-DE.conf │ │ ├── Salisbury, MD-DE.exp │ │ └── Salisbury, MD-DE_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Salt Lake City, UT │ │ ├── Salt Lake City, UT.bngl │ │ ├── Salt Lake City, UT.conf │ │ ├── Salt Lake City, UT.exp │ │ └── Salt Lake City, UT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── San Antonio-New Braunfels, TX │ │ ├── San Antonio-New Braunfels, TX.bngl │ │ ├── San Antonio-New Braunfels, TX.conf │ │ ├── San Antonio-New Braunfels, TX.exp │ │ └── San Antonio-New Braunfels, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── San Diego-Chula Vista-Carlsbad, CA │ │ ├── San Diego-Chula Vista-Carlsbad, CA.bngl │ │ ├── San Diego-Chula Vista-Carlsbad, CA.conf │ │ ├── San Diego-Chula Vista-Carlsbad, CA.exp │ │ └── San Diego-Chula Vista-Carlsbad, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── San Francisco-Oakland-Berkeley, CA │ │ ├── San Francisco-Oakland-Berkeley, CA.bngl │ │ ├── San Francisco-Oakland-Berkeley, CA.conf │ │ ├── San Francisco-Oakland-Berkeley, CA.exp │ │ └── San Francisco-Oakland-Berkeley, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── San Jose-Sunnyvale-Santa Clara, CA │ │ ├── San Jose-Sunnyvale-Santa Clara, CA.bngl │ │ ├── San Jose-Sunnyvale-Santa Clara, CA.conf │ │ ├── San Jose-Sunnyvale-Santa Clara, CA.exp │ │ └── San Jose-Sunnyvale-Santa Clara, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── San Luis Obispo-Paso Robles, CA │ │ ├── San Luis Obispo-Paso Robles, CA.bngl │ │ ├── San Luis Obispo-Paso Robles, CA.conf │ │ ├── San Luis Obispo-Paso Robles, CA.exp │ │ └── San Luis Obispo-Paso Robles, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Santa Maria-Santa Barbara, CA │ │ ├── Santa Maria-Santa Barbara, CA.bngl │ │ ├── Santa Maria-Santa Barbara, CA.conf │ │ ├── Santa Maria-Santa Barbara, CA.exp │ │ └── Santa Maria-Santa Barbara, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Santa Rosa-Petaluma, CA │ │ ├── Santa Rosa-Petaluma, CA.bngl │ │ ├── Santa Rosa-Petaluma, CA.conf │ │ ├── Santa Rosa-Petaluma, CA.exp │ │ └── Santa Rosa-Petaluma, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Savannah, GA │ │ ├── Savannah, GA.bngl │ │ ├── Savannah, GA.conf │ │ ├── Savannah, GA.exp │ │ └── Savannah, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Scranton–Wilkes-Barre, PA │ │ ├── Scranton–Wilkes-Barre, PA.bngl │ │ ├── Scranton–Wilkes-Barre, PA.conf │ │ ├── Scranton–Wilkes-Barre, PA.exp │ │ └── Scranton–Wilkes-Barre, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Seattle-Tacoma-Bellevue, WA │ │ ├── Seattle-Tacoma-Bellevue, WA.bngl │ │ ├── Seattle-Tacoma-Bellevue, WA.conf │ │ ├── Seattle-Tacoma-Bellevue, WA.exp │ │ └── Seattle-Tacoma-Bellevue, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Shreveport-Bossier City, LA │ │ ├── Shreveport-Bossier City, LA.bngl │ │ ├── Shreveport-Bossier City, LA.conf │ │ ├── Shreveport-Bossier City, LA.exp │ │ └── Shreveport-Bossier City, LA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Sioux City, IA-NE-SD │ │ ├── Sioux City, IA-NE-SD.bngl │ │ ├── Sioux City, IA-NE-SD.conf │ │ ├── Sioux City, IA-NE-SD.exp │ │ └── Sioux City, IA-NE-SD_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Sioux Falls, SD │ │ ├── Sioux Falls, SD.bngl │ │ ├── Sioux Falls, SD.conf │ │ ├── Sioux Falls, SD.exp │ │ └── Sioux Falls, SD_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── South Bend-Mishawaka, IN-MI │ │ ├── South Bend-Mishawaka, IN-MI.bngl │ │ ├── South Bend-Mishawaka, IN-MI.conf │ │ ├── South Bend-Mishawaka, IN-MI.exp │ │ └── South Bend-Mishawaka, IN-MI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Spartanburg, SC │ │ ├── Spartanburg, SC.bngl │ │ ├── Spartanburg, SC.conf │ │ ├── Spartanburg, SC.exp │ │ └── Spartanburg, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Spokane-Spokane Valley, WA │ │ ├── Spokane-Spokane Valley, WA.bngl │ │ ├── Spokane-Spokane Valley, WA.conf │ │ ├── Spokane-Spokane Valley, WA.exp │ │ └── Spokane-Spokane Valley, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Springfield, IL │ │ ├── Springfield, IL.bngl │ │ ├── Springfield, IL.conf │ │ ├── Springfield, IL.exp │ │ └── Springfield, IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Springfield, MA │ │ ├── Springfield, MA.bngl │ │ ├── Springfield, MA.conf │ │ ├── Springfield, MA.exp │ │ └── Springfield, MA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── St. Cloud, MN │ │ ├── St. Cloud, MN.bngl │ │ ├── St. Cloud, MN.conf │ │ ├── St. Cloud, MN.exp │ │ └── St. Cloud, MN_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── St. George, UT │ │ ├── St. George, UT.bngl │ │ ├── St. George, UT.conf │ │ ├── St. George, UT.exp │ │ └── St. George, UT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── St. Joseph, MO-KS │ │ ├── St. Joseph, MO-KS.bngl │ │ ├── St. Joseph, MO-KS.conf │ │ ├── St. Joseph, MO-KS.exp │ │ └── St. Joseph, MO-KS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── St. Louis, MO-IL │ │ ├── St. Louis, MO-IL.bngl │ │ ├── St. Louis, MO-IL.conf │ │ ├── St. Louis, MO-IL.exp │ │ └── St. Louis, MO-IL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Stockton, CA │ │ ├── Stockton, CA.bngl │ │ ├── Stockton, CA.conf │ │ ├── Stockton, CA.exp │ │ └── Stockton, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Sumter, SC │ │ ├── Sumter, SC.bngl │ │ ├── Sumter, SC.conf │ │ ├── Sumter, SC.exp │ │ └── Sumter, SC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Syracuse, NY │ │ ├── Syracuse, NY.bngl │ │ ├── Syracuse, NY.conf │ │ ├── Syracuse, NY.exp │ │ └── Syracuse, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Tallahassee, FL │ │ ├── Tallahassee, FL.bngl │ │ ├── Tallahassee, FL.conf │ │ ├── Tallahassee, FL.exp │ │ └── Tallahassee, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Tampa-St. Petersburg-Clearwater, FL │ │ ├── Tampa-St. Petersburg-Clearwater, FL.bngl │ │ ├── Tampa-St. Petersburg-Clearwater, FL.conf │ │ ├── Tampa-St. Petersburg-Clearwater, FL.exp │ │ └── Tampa-St. Petersburg-Clearwater, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Texarkana, TX-AR │ │ ├── Texarkana, TX-AR.bngl │ │ ├── Texarkana, TX-AR.conf │ │ ├── Texarkana, TX-AR.exp │ │ └── Texarkana, TX-AR_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── The Villages, FL │ │ ├── The Villages, FL.bngl │ │ ├── The Villages, FL.conf │ │ ├── The Villages, FL.exp │ │ └── The Villages, FL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Toledo, OH │ │ ├── Toledo, OH.bngl │ │ ├── Toledo, OH.conf │ │ ├── Toledo, OH.exp │ │ └── Toledo, OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Topeka, KS │ │ ├── Topeka, KS.bngl │ │ ├── Topeka, KS.conf │ │ ├── Topeka, KS.exp │ │ └── Topeka, KS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Trenton-Princeton, NJ │ │ ├── Trenton-Princeton, NJ.bngl │ │ ├── Trenton-Princeton, NJ.conf │ │ ├── Trenton-Princeton, NJ.exp │ │ └── Trenton-Princeton, NJ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Tucson, AZ │ │ ├── Tucson, AZ.bngl │ │ ├── Tucson, AZ.conf │ │ ├── Tucson, AZ.exp │ │ └── Tucson, AZ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Tulsa, OK │ │ ├── Tulsa, OK.bngl │ │ ├── Tulsa, OK.conf │ │ ├── Tulsa, OK.exp │ │ └── Tulsa, OK_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Tuscaloosa, AL │ │ ├── Tuscaloosa, AL.bngl │ │ ├── Tuscaloosa, AL.conf │ │ ├── Tuscaloosa, AL.exp │ │ └── Tuscaloosa, AL_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Twin Falls, ID │ │ ├── Twin Falls, ID.bngl │ │ ├── Twin Falls, ID.conf │ │ ├── Twin Falls, ID.exp │ │ └── Twin Falls, ID_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Urban Honolulu, HI │ │ ├── Urban Honolulu, HI.bngl │ │ ├── Urban Honolulu, HI.conf │ │ ├── Urban Honolulu, HI.exp │ │ └── Urban Honolulu, HI_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Utica-Rome, NY │ │ ├── Utica-Rome, NY.bngl │ │ ├── Utica-Rome, NY.conf │ │ ├── Utica-Rome, NY.exp │ │ └── Utica-Rome, NY_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Valdosta, GA │ │ ├── Valdosta, GA.bngl │ │ ├── Valdosta, GA.conf │ │ ├── Valdosta, GA.exp │ │ └── Valdosta, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Vallejo, CA │ │ ├── Vallejo, CA.bngl │ │ ├── Vallejo, CA.conf │ │ ├── Vallejo, CA.exp │ │ └── Vallejo, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Victoria, TX │ │ ├── Victoria, TX.bngl │ │ ├── Victoria, TX.conf │ │ ├── Victoria, TX.exp │ │ └── Victoria, TX_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Vineland-Bridgeton, NJ │ │ ├── Vineland-Bridgeton, NJ.bngl │ │ ├── Vineland-Bridgeton, NJ.conf │ │ ├── Vineland-Bridgeton, NJ.exp │ │ └── Vineland-Bridgeton, NJ_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Virginia Beach-Norfolk-Newport News, VA-NC │ │ ├── Virginia Beach-Norfolk-Newport News, VA-NC.bngl │ │ ├── Virginia Beach-Norfolk-Newport News, VA-NC.conf │ │ ├── Virginia Beach-Norfolk-Newport News, VA-NC.exp │ │ └── Virginia Beach-Norfolk-Newport News, VA-NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Visalia, CA │ │ ├── Visalia, CA.bngl │ │ ├── Visalia, CA.conf │ │ ├── Visalia, CA.exp │ │ └── Visalia, CA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Warner Robins, GA │ │ ├── Warner Robins, GA.bngl │ │ ├── Warner Robins, GA.conf │ │ ├── Warner Robins, GA.exp │ │ └── Warner Robins, GA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Washington-Arlington-Alexandria, DC-VA-MD-WV │ │ ├── Washington-Arlington-Alexandria, DC-VA-MD-WV.bngl │ │ ├── Washington-Arlington-Alexandria, DC-VA-MD-WV.conf │ │ ├── Washington-Arlington-Alexandria, DC-VA-MD-WV.exp │ │ └── Washington-Arlington-Alexandria, DC-VA-MD-WV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Waterloo-Cedar Falls, IA │ │ ├── Waterloo-Cedar Falls, IA.bngl │ │ ├── Waterloo-Cedar Falls, IA.conf │ │ ├── Waterloo-Cedar Falls, IA.exp │ │ └── Waterloo-Cedar Falls, IA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Wenatchee, WA │ │ ├── Wenatchee, WA.bngl │ │ ├── Wenatchee, WA.conf │ │ ├── Wenatchee, WA.exp │ │ └── Wenatchee, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Wheeling, WV-OH │ │ ├── Wheeling, WV-OH.bngl │ │ ├── Wheeling, WV-OH.conf │ │ ├── Wheeling, WV-OH.exp │ │ └── Wheeling, WV-OH_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Wichita, KS │ │ ├── Wichita, KS.bngl │ │ ├── Wichita, KS.conf │ │ ├── Wichita, KS.exp │ │ └── Wichita, KS_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Winchester, VA-WV │ │ ├── Winchester, VA-WV.bngl │ │ ├── Winchester, VA-WV.conf │ │ ├── Winchester, VA-WV.exp │ │ └── Winchester, VA-WV_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Winston-Salem, NC │ │ ├── Winston-Salem, NC.bngl │ │ ├── Winston-Salem, NC.conf │ │ ├── Winston-Salem, NC.exp │ │ └── Winston-Salem, NC_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Worcester, MA-CT │ │ ├── Worcester, MA-CT.bngl │ │ ├── Worcester, MA-CT.conf │ │ ├── Worcester, MA-CT.exp │ │ └── Worcester, MA-CT_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Yakima, WA │ │ ├── Yakima, WA.bngl │ │ ├── Yakima, WA.conf │ │ ├── Yakima, WA.exp │ │ └── Yakima, WA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── York-Hanover, PA │ │ ├── York-Hanover, PA.bngl │ │ ├── York-Hanover, PA.conf │ │ ├── York-Hanover, PA.exp │ │ └── York-Hanover, PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Youngstown-Warren-Boardman, OH-PA │ │ ├── Youngstown-Warren-Boardman, OH-PA.bngl │ │ ├── Youngstown-Warren-Boardman, OH-PA.conf │ │ ├── Youngstown-Warren-Boardman, OH-PA.exp │ │ └── Youngstown-Warren-Boardman, OH-PA_output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ └── Yuma, AZ │ │ ├── Yuma, AZ.bngl │ │ ├── Yuma, AZ.conf │ │ ├── Yuma, AZ.exp │ │ └── Yuma, AZ_output │ │ └── adaptive_files │ │ ├── MLE_params.txt │ │ ├── diff.txt │ │ └── diffMatrix.txt ├── Miller2022NavajoNation │ ├── README.md │ └── supplementary_material │ │ ├── Arizona │ │ ├── Arizona.bngl │ │ ├── Arizona.conf │ │ └── Arizona.exp │ │ ├── Colorado │ │ ├── Colorado.bngl │ │ ├── Colorado.conf │ │ └── Colorado.exp │ │ ├── NavajoNation │ │ ├── NavajoNation.bngl │ │ ├── NavajoNation.conf │ │ └── NavajoNation.exp │ │ ├── NewMexico │ │ ├── NewMexico.bngl │ │ ├── NewMexico.conf │ │ └── NewMexico.exp │ │ └── Utah │ │ ├── Utah.bngl │ │ ├── Utah.conf │ │ └── Utah.exp ├── Miller2025_MEK_Isoforms │ ├── MEK_isoform_aMCMC │ │ ├── KO.exp │ │ ├── KO.prop │ │ ├── MEK1_KO.bngl │ │ ├── MEK1_N78G.bngl │ │ ├── MEK1_T292A.bngl │ │ ├── MEK1_T292D.bngl │ │ ├── MEK1_WT.bngl │ │ ├── N78G.exp │ │ ├── N78G.prop │ │ ├── T292A.exp │ │ ├── T292A.prop │ │ ├── T292D.exp │ │ ├── T292D.prop │ │ ├── WT.exp │ │ ├── WT.prop │ │ └── config.conf │ ├── MEK_isoform_optimization_DE │ │ ├── Config_GLOBAL.conf │ │ ├── KO.exp │ │ ├── KO.prop │ │ ├── MEK1_KO.bngl │ │ ├── MEK1_N78G.bngl │ │ ├── MEK1_T292A.bngl │ │ ├── MEK1_T292D.bngl │ │ ├── MEK1_WT.bngl │ │ ├── N78G.exp │ │ ├── N78G.prop │ │ ├── T292A.exp │ │ ├── T292A.prop │ │ ├── T292D.exp │ │ ├── T292D.prop │ │ ├── WT.exp │ │ └── WT.prop │ └── README.MD ├── Vax_and_Variants │ ├── Dallas-markov-chain-trace-plot.pdf │ ├── Dallas-mle-plot.pdf │ ├── Dallas-pairs-plot.pdf │ ├── Dallas-parameter-trace-plot.pdf │ ├── Dallas │ │ ├── Dallas.bngl │ │ ├── Dallas.conf │ │ ├── Dallas.exp │ │ └── Output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Houston-markov-chain-trace-plot.pdf │ ├── Houston-mle-plot.pdf │ ├── Houston-pairs-plot.pdf │ ├── Houston-parameter-trace-plot.pdf │ ├── Houston │ │ ├── Houston.bngl │ │ ├── Houston.conf │ │ ├── Houston.exp │ │ └── Output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── NYC-markov-chain-trace-plot.pdf │ ├── NYC-mle-plot.pdf │ ├── NYC-pairs-plot.pdf │ ├── NYC-parameter-trace-plot.pdf │ ├── NYC │ │ ├── NYC.bngl │ │ ├── NYC.conf │ │ ├── NYC.exp │ │ └── Output │ │ │ └── adaptive_files │ │ │ ├── MLE_params.txt │ │ │ ├── diff.txt │ │ │ └── diffMatrix.txt │ ├── Phoenix-markov-chain-trace-plot.pdf │ ├── Phoenix-mle-plot.pdf │ ├── Phoenix-pairs-plot.pdf │ ├── Phoenix-parameter-trace-plot.pdf │ ├── Phoenix │ │ ├── Output │ │ │ └── adaptive_files │ │ │ │ ├── MLE_params.txt │ │ │ │ ├── diff.txt │ │ │ │ └── diffMatrix.txt │ │ ├── Phoenix.bngl │ │ ├── Phoenix.conf │ │ └── Phoenix.exp │ └── README.md ├── constraint_advanced │ ├── easy_polynomial.conf │ ├── mut.prop │ ├── polynomial.bngl │ ├── polynomial.conf │ ├── polynomial_ground.bngl │ ├── wt.exp │ └── wt.prop ├── constraint_demo │ ├── generate_con.py │ ├── par.exp │ ├── par.prop │ ├── parabola.bngl │ ├── parabola.conf │ └── parabola_ground.bngl ├── constraint_raf │ ├── IA.exp │ ├── RAFi.bngl │ ├── RAFi_ground.bngl │ ├── raf.conf │ ├── raf.exp │ └── raf.prop ├── degranulation │ ├── README.txt │ ├── degran_mcmc.sh │ ├── mcmc.conf │ ├── model.bngl │ ├── model_fit.conf │ ├── model_refine.conf │ ├── model_tofit.bngl │ ├── p1_5.exp │ ├── p3_120.exp │ ├── p3_240.exp │ ├── p3_30.exp │ ├── p3_5.exp │ └── p3_60.exp ├── demo │ ├── demo_bng.conf │ ├── demo_xml.conf │ ├── par1.exp │ ├── parabola.bngl │ ├── parabola.xml │ └── parabola_bootstrap.conf ├── egfr_benchmark │ ├── Readme.txt │ ├── benchmark_de.conf │ ├── benchmark_de_all.conf │ ├── benchmark_de_best.conf │ ├── benchmark_de_bigpop.conf │ ├── benchmark_de_boot.conf │ ├── benchmark_dream.conf │ ├── benchmark_mcmc.conf │ ├── benchmark_pso.conf │ ├── benchmark_pt.conf │ ├── benchmark_sa.conf │ ├── benchmark_sim.conf │ ├── benchmark_ss.conf │ ├── benchmark_ss_smallpop.conf │ ├── egfr.bngl │ ├── egfr.exp │ ├── egfr_ground.bngl │ ├── egfr_ground.cdat │ ├── egfr_ground.gdat │ └── egfr_ground.net ├── egfr_nf │ ├── doseresponse.exp │ ├── egfr_nf.bngl │ ├── egfr_nf.conf │ └── timecourse.exp ├── egfr_ode │ ├── doseresponse.exp │ ├── egfr_ode.bngl │ ├── egfr_ode.conf │ └── timecourse.exp ├── fceri_gamma │ ├── fceri_gamma.conf │ ├── fceri_gamma2.bngl │ ├── fceri_gamma2.cdat │ ├── fceri_gamma2.exp │ ├── fceri_gamma2.gdat │ ├── fceri_gamma2.net │ └── fceri_gamma2_ground_truth.bngl ├── igf1r │ ├── F5B.exp │ ├── IGF1R_Model_receptor_activation_bnf.bngl │ ├── igf1r.conf │ └── igf1r_boot.conf ├── raf_sbml │ ├── Romano2014.cps │ ├── Romano2014.xml │ ├── copasi-ground-output │ ├── erkData.exp │ ├── raf_sbml.conf │ └── raf_sbml_simple.conf ├── receptor │ ├── receptor.bngl │ ├── receptor.conf │ └── receptor.exp ├── receptor_nf │ ├── receptor_nf.bngl │ ├── receptor_nf.conf │ └── receptor_nf.exp ├── tcr │ ├── tcr-ss.conf │ ├── tcr.bngl │ ├── tcr.exp │ └── tcr_batch.sh ├── tlbr │ ├── tlbr.bngl │ ├── tlbr.conf │ ├── tlbr.exp │ └── tlbr_batch.sh └── yeast_cell_cycle │ ├── TL_set.txt │ ├── Yeast_original.xml │ ├── alpha.exp │ ├── alpha.prop │ ├── cdc15.exp │ ├── cdc15.prop │ ├── cdc28.exp │ ├── cdc28.prop │ ├── constraints │ ├── C.prop │ ├── G.prop │ ├── I.prop │ ├── M.prop │ ├── O.prop │ ├── S.prop │ ├── T.prop │ ├── V.prop │ ├── r.prop │ ├── rC0.prop │ ├── rG0.prop │ ├── rG1.prop │ ├── rG10.prop │ ├── rG11.prop │ ├── rG2.prop │ ├── rG3.prop │ ├── rG4.prop │ ├── rG5.prop │ ├── rG6.prop │ ├── rG7.prop │ ├── rG8.prop │ ├── rG9.prop │ ├── rI0.prop │ ├── rI1.prop │ ├── rI10.prop │ ├── rI2.prop │ ├── rI3.prop │ ├── rI4.prop │ ├── rI5.prop │ ├── rI6.prop │ ├── rI7.prop │ ├── rI8.prop │ ├── rI9.prop │ ├── rM0.prop │ ├── rM1.prop │ ├── rM2.prop │ ├── rO0.prop │ ├── rO1.prop │ ├── rO2.prop │ ├── rS0.prop │ ├── rS1.prop │ ├── rT0.prop │ ├── rT1.prop │ ├── rT10.prop │ ├── rT11.prop │ ├── rT12.prop │ ├── rT13.prop │ ├── rT14.prop │ ├── rT15.prop │ ├── rT16.prop │ ├── rT17.prop │ ├── rT18.prop │ ├── rT19.prop │ ├── rT2.prop │ ├── rT20.prop │ ├── rT21.prop │ ├── rT22.prop │ ├── rT3.prop │ ├── rT4.prop │ ├── rT5.prop │ ├── rT6.prop │ ├── rT7.prop │ ├── rT8.prop │ ├── rT9.prop │ ├── rV0.prop │ ├── rV1.prop │ ├── rV10.prop │ ├── rV11.prop │ ├── rV12.prop │ ├── rV13.prop │ ├── rV14.prop │ ├── rV15.prop │ ├── rV16.prop │ ├── rV17.prop │ ├── rV18.prop │ ├── rV19.prop │ ├── rV1WT.prop │ ├── rV2.prop │ ├── rV20.prop │ ├── rV21.prop │ ├── rV22.prop │ ├── rV23.prop │ ├── rV24.prop │ ├── rV25.prop │ ├── rV26.prop │ ├── rV27.prop │ ├── rV28.prop │ ├── rV29.prop │ ├── rV3.prop │ ├── rV30.prop │ ├── rV31.prop │ ├── rV32.prop │ ├── rV33.prop │ ├── rV34.prop │ ├── rV35.prop │ ├── rV36.prop │ ├── rV37.prop │ ├── rV38.prop │ ├── rV39.prop │ ├── rV4.prop │ ├── rV40.prop │ ├── rV41.prop │ ├── rV42.prop │ ├── rV43.prop │ ├── rV44.prop │ ├── rV45.prop │ ├── rV46.prop │ ├── rV47.prop │ ├── rV48.prop │ ├── rV49.prop │ ├── rV5.prop │ ├── rV50.prop │ ├── rV51.prop │ ├── rV52.prop │ ├── rV53.prop │ ├── rV54.prop │ ├── rV55.prop │ ├── rV56.prop │ ├── rV57.prop │ ├── rV58.prop │ ├── rV59.prop │ ├── rV6.prop │ ├── rV60.prop │ ├── rV61.prop │ ├── rV62.prop │ ├── rV63.prop │ ├── rV7.prop │ ├── rV8.prop │ └── rV9.prop │ ├── helper.py │ ├── mutactions.txt │ ├── mutmodels.txt │ ├── priors.ods │ ├── tyson13-PW2.prop │ ├── tyson13-skeleton.prop │ ├── yeast.conf │ ├── yeast.cps │ ├── yeast.xml │ ├── yeast_15.cps │ ├── yeast_15.xml │ ├── yeast_28.cps │ ├── yeast_28.xml │ ├── yeast_ade.conf │ ├── yeast_alpha.cps │ ├── yeast_alpha.xml │ ├── yeast_manual_peaks.cps │ └── yeast_simple.conf ├── pybnf-runner.py ├── pybnf ├── __init__.py ├── __main__.py ├── algorithms.py ├── cluster.py ├── config.py ├── constraint.py ├── data.py ├── objective.py ├── parse.py ├── printing.py ├── pset.py └── pybnf.py ├── sbml_runner.py ├── setup.py └── tests ├── __init__.py ├── bngl_files ├── ErrNoFrees.bngl ├── LilyIgE.bngl ├── NFmodel.bngl ├── ParamsEverywhere.bngl ├── Simple.bngl ├── Simple_AddActions.bngl ├── Simple_Answer.bngl ├── Simple_GenOnly.bngl ├── Simple_nogen.bngl ├── Tricky.bngl ├── TrickyUS.bngl ├── TrickyWP_p1_5.net ├── abc.conf ├── abc.cps ├── abc.xml ├── abc │ ├── abc_2scan.exp │ ├── abc_ICscan.exp │ ├── abc_data.exp │ ├── abc_data_mutant.exp │ └── abc_scan.exp ├── abc_2scan.conf ├── abc_ICfit.conf ├── abc_ICscan.conf ├── abc_mutant.conf ├── abc_scan.conf ├── abc_ssa.conf ├── con_test.gdat ├── con_test.prop ├── con_test_likelihood.prop ├── errors │ ├── actions_syntax.bngl │ ├── actions_syntax.conf │ ├── bad_exp.conf │ ├── bad_exp │ │ └── par1.exp │ ├── bad_exp_number.conf │ ├── bad_fit_type.conf │ ├── bad_initialization.conf │ ├── bad_objfunc.conf │ ├── blank.conf │ ├── bng_badcommand.conf │ ├── bng_error.bngl │ ├── bng_error.conf │ ├── chisq_no_sd.conf │ ├── chisq_no_sd │ │ └── par1.exp │ ├── constraint_domain │ │ ├── always │ │ │ └── par1.prop │ │ ├── at │ │ │ └── par1.prop │ │ ├── between │ │ │ └── par1.prop │ │ └── parabola.bngl │ ├── constraint_domain_always.conf │ ├── constraint_domain_at.conf │ ├── constraint_domain_between.conf │ ├── constraint_invalid_suffix.conf │ ├── constraint_missing_file.conf │ ├── constraint_suffix.conf │ ├── constraint_suffix │ │ ├── par1.prop │ │ └── xyz.prop │ ├── constraint_syntax.conf │ ├── constraint_syntax │ │ └── par1.prop │ ├── constraint_variable.conf │ ├── constraint_variable │ │ └── par1.prop │ ├── copasi_badparam.conf │ ├── copasi_missing.conf │ ├── copasi_missing.xml │ ├── data_not_found.conf │ ├── data_not_found_2.conf │ ├── data_not_specified.conf │ ├── duplicate_key.conf │ ├── duplicate_var.conf │ ├── free_extra.conf │ ├── free_missing.bngl │ ├── free_missing.conf │ ├── garbage_line.conf │ ├── info.txt │ ├── invalid_config_key.conf │ ├── key_bad_value.conf │ ├── key_bad_value_2.conf │ ├── key_wrong_type.conf │ ├── long_output_tree.conf │ ├── model_not_found.conf │ ├── model_not_specified.conf │ ├── no_frees.bngl │ ├── no_frees.conf │ ├── no_generate_network.bngl │ ├── no_generate_network.conf │ ├── no_size.conf │ ├── no_suffix.bngl │ ├── no_suffix.conf │ ├── no_write_access.conf │ ├── normalization_badindices.conf │ ├── normalization_badpairing.conf │ ├── normalization_contradiction.conf │ ├── normalization_contradiction2.conf │ ├── normalization_disaster.conf │ ├── normalization_mixed_types.conf │ ├── normalize_badfile.conf │ ├── normalize_badtype.conf │ ├── overflow.conf │ ├── seed.conf │ ├── simple_nf_seed.bngl │ ├── working.conf │ ├── xml_notfound.conf │ ├── xml_wrongformat.conf │ └── xml_wrongformat.xml ├── nf1.exp ├── nf_cmdline.conf ├── p1_5.exp ├── p1_5.prop ├── par1.exp ├── par1.prop ├── par1_mutant.exp ├── parabola.bngl ├── parabola.conf ├── parabola_cluster.conf ├── parabola_cmdline.conf ├── parabola_cmdline_ade.conf ├── parabola_cmdline_bmc.conf ├── parabola_cmdline_de.conf ├── parabola_cmdline_de_refine.conf ├── parabola_cmdline_pt.conf ├── parabola_cmdline_sa.conf ├── parabola_cmdline_sim.conf ├── parabola_cmdline_smoothing.conf ├── parabola_cmdline_ss.conf ├── parabola_con.conf ├── parabola_mutant.conf ├── raf.xml ├── special_cases │ ├── abc_offset.conf │ ├── abc_offset.cps │ ├── abc_offset.exp │ ├── abc_offset.xml │ ├── add_action.conf │ ├── add_action │ │ ├── par1.exp │ │ └── par2.exp │ ├── delete_files.conf │ ├── duplicate_names │ │ ├── duplicate.conf │ │ ├── duplicate2.conf │ │ ├── par1.exp │ │ ├── par2.exp │ │ └── parabola2.bngl │ ├── exp_spaces.conf │ ├── exp_spaces │ │ └── par1.exp │ ├── integrators │ │ ├── abc_euler.conf │ │ ├── abc_gillespie.conf │ │ ├── abc_rk4.conf │ │ └── abc_rk45.conf │ ├── min_objective.conf │ ├── model_check │ │ ├── extrakeys.conf │ │ ├── parabola.bngl │ │ └── parabola_check.conf │ ├── normalize.conf │ ├── normalize │ │ └── par1.exp │ ├── normalize_2.conf │ ├── normalize_3.conf │ ├── output_limit.conf │ ├── par1.prop │ ├── parabola_bootstrap.conf │ ├── parabola_cmdline_bmc_boxerrors.conf │ ├── parabola_cmdline_bmc_normrand.conf │ ├── parabola_cmdline_de_largesize.conf │ ├── parabola_cmdline_de_unusedkeys.conf │ ├── parabola_con_2.conf │ ├── postprocess │ │ ├── bugscript.py │ │ ├── myscript.py │ │ ├── par1.exp │ │ ├── parabola_cmdline_de.conf │ │ ├── parabola_cmdline_de_local.conf │ │ └── unit_test_data.gdat │ ├── pso_stop.conf │ ├── sim_stop.conf │ ├── unused_data │ │ ├── par1.exp │ │ ├── parabola.conf │ │ └── parabola_local.conf │ ├── verbosity.conf │ ├── verbosity2.conf │ └── verbosity3.conf ├── test.gdat ├── thing.exp ├── traj.txt └── verbosity.conf ├── context.py ├── full_tests ├── T1-ssprop │ ├── mut.prop │ ├── mutv2.exp │ ├── polynomial.bngl │ ├── polynomial.conf │ ├── wt.exp │ └── wt.prop ├── T2-ade-abcd │ ├── d1.exp │ ├── d1.prop │ ├── fit_ade.conf │ ├── m1.xml │ └── postproc.py ├── T3-de-egg │ ├── egg-de.conf │ ├── egg.bngl │ └── egg.exp ├── T4-pso-nf │ ├── receptor_nf.bngl │ ├── receptor_nf.exp │ └── rnf.conf ├── T5-pt-trivial │ ├── data.exp │ ├── trivial.bngl │ └── trivial_pt.conf ├── T6-check │ ├── mut.prop │ ├── polynomial.bngl │ ├── polynomial.conf │ ├── wt.exp │ └── wt.prop ├── cluster.sh ├── cluster_manual.sh ├── example_summary.txt ├── example_summary_sf.txt ├── example_summary_ssh.txt └── run_all.py ├── test_bayes_mcmc.py ├── test_config_class.py ├── test_constraint.py ├── test_data_class.py ├── test_diff_evolution.py ├── test_dream_class.py ├── test_freeparameter_class.py ├── test_job_class.py ├── test_model_class.py ├── test_objective_funcs.py ├── test_parse_class.py ├── test_particle_swarm.py ├── test_pset_class.py ├── test_sbml_model.py ├── test_scatter.py ├── 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IN_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.5486290287336627e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Bloomsburg-Berwick, PA/Bloomsburg-Berwick, PA_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.6292461669525610e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Boise City, ID/Boise City, ID_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.6831268321904527e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Boulder, CO/Boulder, CO_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.2013546520907212e-01 2 | 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OH-KY-IN_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 9.7635252152513910e-02 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Cleveland-Elyria, OH/Cleveland-Elyria, OH_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 9.8750923317770037e-02 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/College Station-Bryan, TX/College Station-Bryan, TX_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.7820629010546446e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Colorado Springs, CO/Colorado Springs, CO_output/adaptive_files/diff.txt: 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CA_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.4136091435899817e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/El Paso, TX/El Paso, TX_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.5701958800165200e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Elkhart-Goshen, IN/Elkhart-Goshen, IN_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.2541962798831582e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Evansville, IN-KY/Evansville, IN-KY_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.2618828028996973e-01 2 | 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| 1.0662690979314027e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Gulfport-Biloxi, MS/Gulfport-Biloxi, MS_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.2103027824826285e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Hammond, LA/Hammond, LA_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.4944867564303977e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Hanford-Corcoran, CA/Hanford-Corcoran, CA_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.8074624644105134e-01 2 | -------------------------------------------------------------------------------- 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FL_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.1545985098977372e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Janesville-Beloit, WI/Janesville-Beloit, WI_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 2.1527485678676070e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Kalamazoo-Portage, MI/Kalamazoo-Portage, MI_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 1.3621288294719033e-01 2 | -------------------------------------------------------------------------------- /examples/Mallela2022MSAs/Kankakee, IL/Kankakee, IL_output/adaptive_files/diff.txt: -------------------------------------------------------------------------------- 1 | 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