├── .codecov.yml ├── .gitattributes ├── .github ├── CONTRIBUTING.md ├── PULL_REQUEST_TEMPLATE.md └── workflows │ └── CI.yaml ├── .gitignore ├── .lgtm.yml ├── CODE_OF_CONDUCT.md ├── LICENSE ├── MANIFEST.in ├── Mochi.png ├── README.md ├── devtools ├── README.md ├── conda-envs │ └── test_env.yaml ├── legacy-miniconda-setup │ └── before_install.sh └── scripts │ └── create_conda_env.py ├── docs ├── INSTALLATION.md ├── Makefile ├── README.md ├── _build │ ├── doctrees │ │ ├── api.doctree │ │ ├── autosummary │ │ │ ├── ._pymochi.data.doctree │ │ │ ├── pymochi.data.doctree │ │ │ ├── sphinx.environment.BuildEnvironment.doctree │ │ │ └── sphinx.util.relative_uri.doctree │ │ ├── environment.pickle │ │ ├── getting_started.doctree │ │ └── index.doctree │ └── html │ │ ├── _modules │ │ ├── index.html │ │ ├── pymochi │ │ │ ├── data.html │ │ │ ├── misc.html │ │ │ ├── models.html │ │ │ ├── report.html │ │ │ └── transformation.html │ │ └── sphinx │ │ │ ├── environment.html │ │ │ └── util │ │ │ └── osutil.html │ │ ├── _sources │ │ ├── api.rst.txt │ │ ├── autosummary │ │ │ ├── pymochi.data.rst.txt │ │ │ ├── sphinx.environment.BuildEnvironment.rst.txt │ │ │ └── sphinx.util.relative_uri.rst.txt │ │ ├── getting_started.rst.txt │ │ └── index.rst.txt │ │ ├── _static │ │ ├── README.md │ │ ├── _sphinx_javascript_frameworks_compat.js │ │ ├── basic.css │ │ ├── css │ │ │ ├── badge_only.css │ │ │ ├── fonts │ │ │ │ ├── Roboto-Slab-Bold.woff │ │ │ │ ├── Roboto-Slab-Bold.woff2 │ │ │ │ ├── Roboto-Slab-Regular.woff │ │ │ │ ├── Roboto-Slab-Regular.woff2 │ │ │ │ ├── fontawesome-webfont.eot │ │ │ │ ├── fontawesome-webfont.svg │ │ │ │ ├── fontawesome-webfont.ttf │ │ │ │ ├── fontawesome-webfont.woff │ │ │ │ ├── fontawesome-webfont.woff2 │ │ │ │ ├── lato-bold-italic.woff │ │ │ │ ├── lato-bold-italic.woff2 │ │ │ │ ├── lato-bold.woff │ │ │ │ ├── lato-bold.woff2 │ │ │ │ ├── lato-normal-italic.woff │ │ │ │ ├── lato-normal-italic.woff2 │ │ │ │ ├── lato-normal.woff │ │ │ │ └── lato-normal.woff2 │ │ │ └── theme.css │ │ ├── doctools.js │ │ ├── documentation_options.js │ │ ├── file.png │ │ ├── jquery-3.6.0.js │ │ ├── jquery.js │ │ ├── js │ │ │ ├── badge_only.js │ │ │ ├── html5shiv-printshiv.min.js │ │ │ ├── html5shiv.min.js │ │ │ └── theme.js │ │ ├── language_data.js │ │ ├── minus.png │ │ ├── plus.png │ │ ├── pygments.css │ │ ├── searchtools.js │ │ ├── sphinx_highlight.js │ │ ├── underscore-1.13.1.js │ │ └── underscore.js │ │ ├── api.html │ │ ├── autosummary │ │ ├── pymochi.data.html │ │ ├── sphinx.environment.BuildEnvironment.html │ │ └── sphinx.util.relative_uri.html │ │ ├── genindex.html │ │ ├── getting_started.html │ │ ├── index.html │ │ ├── objects.inv │ │ ├── py-modindex.html │ │ ├── search.html │ │ └── searchindex.js ├── _static │ └── README.md ├── _templates │ └── README.md ├── api.rst ├── conf.py ├── getting_started.rst ├── index.rst ├── make.bat └── requirements.yaml ├── pymochi.yaml ├── pymochi ├── __init__.py ├── _version.py ├── bin │ ├── demo_mochi.py │ └── run_mochi.py ├── 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