├── .gitignore ├── Makefile ├── README.md ├── all-mss.c ├── arr-merge.c ├── arr-shuf.c ├── bwt ├── bwt-bcr.c ├── bwt-bcr1.c └── bwt-std.c ├── checksum ├── crc32-zlib.c ├── sha1-gs.c ├── sha1-oauth.c └── sha1-openssl.c ├── data ├── hs37d5.cen └── hs38.cen ├── eigen.c ├── getopt-test.c ├── getopt.c ├── getopt.h ├── inv-inthash.c ├── js ├── bedutils.js ├── chr-plot.js └── cosmic.js ├── klib └── khash.h ├── kmer-cnt.c ├── lis.c ├── manServer.pl ├── mastermind.c ├── mmap-test.c ├── res-sample.c └── x86-simd-test.c /.gitignore: -------------------------------------------------------------------------------- 1 | *.o 2 | *.a 3 | .*.swp 4 | -------------------------------------------------------------------------------- /Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lh3/lh3-snippets/HEAD/Makefile -------------------------------------------------------------------------------- /README.md: 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