├── .gitattributes ├── README.md ├── app.R ├── data ├── Initialize_expression.rda ├── Initialize_metadata.rda ├── Saved_genes_panel.rda ├── accounts.csv ├── color_panel.R ├── dataset_map.csv ├── test1_expression.rda ├── test1_metadata.rda ├── test2_expression.rda ├── test2_metadata.rda ├── test3_expression.rda ├── test3_metadata.rda ├── test4_expression.rda └── test4_metadata.rda ├── dataprepare_utils.R ├── img ├── page_layout.png └── plot.png ├── plot_utils.R └── www └── User Manual of scDVA.pdf /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/.gitattributes -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/README.md -------------------------------------------------------------------------------- /app.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/app.R -------------------------------------------------------------------------------- /data/Initialize_expression.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/Initialize_expression.rda -------------------------------------------------------------------------------- /data/Initialize_metadata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/Initialize_metadata.rda -------------------------------------------------------------------------------- /data/Saved_genes_panel.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/Saved_genes_panel.rda -------------------------------------------------------------------------------- /data/accounts.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/accounts.csv -------------------------------------------------------------------------------- /data/color_panel.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/color_panel.R -------------------------------------------------------------------------------- /data/dataset_map.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/dataset_map.csv -------------------------------------------------------------------------------- /data/test1_expression.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test1_expression.rda -------------------------------------------------------------------------------- /data/test1_metadata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test1_metadata.rda -------------------------------------------------------------------------------- /data/test2_expression.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test2_expression.rda -------------------------------------------------------------------------------- /data/test2_metadata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test2_metadata.rda -------------------------------------------------------------------------------- /data/test3_expression.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test3_expression.rda -------------------------------------------------------------------------------- /data/test3_metadata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test3_metadata.rda -------------------------------------------------------------------------------- /data/test4_expression.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test4_expression.rda -------------------------------------------------------------------------------- /data/test4_metadata.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/data/test4_metadata.rda -------------------------------------------------------------------------------- /dataprepare_utils.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/dataprepare_utils.R -------------------------------------------------------------------------------- /img/page_layout.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/img/page_layout.png -------------------------------------------------------------------------------- /img/plot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/img/plot.png -------------------------------------------------------------------------------- /plot_utils.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/plot_utils.R -------------------------------------------------------------------------------- /www/User Manual of scDVA.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/liziyie/scDVA/HEAD/www/User Manual of scDVA.pdf --------------------------------------------------------------------------------