├── Brain_MRI ├── __init__.py ├── __pycache__ │ ├── InferenceSdk_AutoRG.cpython-38.pyc │ ├── InferenceSdk_UniBrain.cpython-38.pyc │ ├── __init__.cpython-37.pyc │ ├── __init__.cpython-38.pyc │ ├── inferenceSdk.cpython-37.pyc │ ├── inferenceSdk.cpython-38.pyc │ └── inferenceSdk_build_data.cpython-38.pyc ├── configs │ ├── anatomy.json │ ├── anatomy_name.json │ ├── anatomy_name_chn.json │ ├── anatomy_order.json │ ├── config_UniBrain.yaml │ ├── dis_description.json │ ├── dis_order.json │ ├── dis_order_id.json │ ├── label1.npy │ ├── modal_id.json │ ├── thresh.json │ └── utils.py ├── inferenceSdk.py └── models │ ├── __init__.py │ ├── __pycache__ │ ├── __init__.cpython-38.pyc │ ├── augment.cpython-38.pyc │ └── dataset.cpython-38.pyc │ ├── diagnosis │ ├── __pycache__ │ │ ├── augment.cpython-38.pyc │ │ ├── before_fuse.cpython-38.pyc │ │ ├── dataset.cpython-38.pyc │ │ ├── imageEncoder.cpython-38.pyc │ │ ├── model_MedKLIP_before_fuse.cpython-38.pyc │ │ ├── resnet.cpython-38.pyc │ │ ├── tokenization_bert.cpython-38.pyc │ │ ├── transformer.cpython-38.pyc │ │ └── utils.cpython-38.pyc │ ├── augment.py │ ├── before_fuse.py │ ├── dataset.py │ ├── imageEncoder.py │ ├── model_MedKLIP_before_fuse.py │ ├── resnet.py │ ├── tokenization_bert.py │ ├── transformer.py │ └── utils.py │ ├── run │ ├── __pycache__ │ │ ├── default_configuration.cpython-38.pyc │ │ ├── default_configuration.cpython-39.pyc │ │ └── load_pretrained_weights.cpython-38.pyc │ ├── default_configuration.py │ └── load_pretrained_weights.py │ ├── utilities │ ├── __pycache__ │ │ ├── add_mask_img.cpython-38.pyc │ │ ├── gen_data_json.cpython-38.pyc │ │ ├── llm_metric.cpython-38.pyc │ │ ├── nd_softmax.cpython-38.pyc │ │ ├── one_hot_encoding.cpython-38.pyc │ │ ├── random_stuff.cpython-38.pyc │ │ ├── segmentation_export.cpython-38.pyc │ │ ├── set_n_proc_DA.cpython-38.pyc │ │ ├── summarize_plans.cpython-38.pyc │ │ ├── task_name_id_conversion.cpython-38.pyc │ │ ├── tensor_utilities.cpython-38.pyc │ │ └── to_torch.cpython-38.pyc │ ├── add_mask_img.py │ ├── gen_data_json.py │ ├── llm_metric.py │ ├── nd_softmax.py │ ├── nii2jpg.py │ ├── one_hot_encoding.py │ ├── random_stuff.py │ ├── segmentation_export.py │ ├── set_n_proc_DA.py │ ├── summarize_plans.py │ ├── task_name_id_conversion.py │ ├── tensor_utilities.py │ └── to_torch.py │ └── utils_file │ ├── a02_image.nii.gz │ ├── a02_image_0000.nii.gz │ ├── nnUNetPlansv2.1_plans_3D.pkl │ ├── seg.json │ ├── seg_modal_dic.json │ └── val_choose_number.json ├── README.md ├── README_CN.md ├── README_EN.md ├── assets └── graphical_abstract.png ├── docs ├── hammer_anas.json ├── test_file_multi.json └── test_file_single.json ├── requirements.txt └── sdk_api.py /Brain_MRI/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Brain_MRI/__pycache__/InferenceSdk_AutoRG.cpython-38.pyc: 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