├── .gitignore ├── CZ-Krp_fetch.png ├── EC workflow.Rproj ├── EC_workflow ├── KRP16_settings_2025-04-27.R ├── WF_1_data_preparation_2025-04-27.R ├── WF_2_QC_2025-04-27.R ├── WF_3_GF_&_FP_2025-04-27.R ├── WF_4_Summary_2025-04-27.R └── utilities_2025-04-27.R ├── NEWS.md ├── Processing_chain.jpg ├── README.Rmd ├── README.md ├── ROI boundary example.jpg ├── combn_QC.jpg ├── qa_and_qc.jpg └── qc_application.jpg /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/.gitignore -------------------------------------------------------------------------------- /CZ-Krp_fetch.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/CZ-Krp_fetch.png -------------------------------------------------------------------------------- /EC workflow.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC workflow.Rproj -------------------------------------------------------------------------------- /EC_workflow/KRP16_settings_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/KRP16_settings_2025-04-27.R -------------------------------------------------------------------------------- /EC_workflow/WF_1_data_preparation_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/WF_1_data_preparation_2025-04-27.R -------------------------------------------------------------------------------- /EC_workflow/WF_2_QC_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/WF_2_QC_2025-04-27.R -------------------------------------------------------------------------------- /EC_workflow/WF_3_GF_&_FP_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/WF_3_GF_&_FP_2025-04-27.R -------------------------------------------------------------------------------- /EC_workflow/WF_4_Summary_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/WF_4_Summary_2025-04-27.R -------------------------------------------------------------------------------- /EC_workflow/utilities_2025-04-27.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/EC_workflow/utilities_2025-04-27.R -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/NEWS.md -------------------------------------------------------------------------------- /Processing_chain.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/Processing_chain.jpg -------------------------------------------------------------------------------- /README.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/README.Rmd -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/README.md -------------------------------------------------------------------------------- /ROI boundary example.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/ROI boundary example.jpg -------------------------------------------------------------------------------- /combn_QC.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/combn_QC.jpg -------------------------------------------------------------------------------- /qa_and_qc.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/qa_and_qc.jpg -------------------------------------------------------------------------------- /qc_application.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lsigut/EC_workflow/HEAD/qc_application.jpg --------------------------------------------------------------------------------