├── CreateChrBedFromVCF.pl ├── CreateChrBedFromVCF2.pl ├── MS2LDhat.pl ├── MS2PHASE.pl ├── README.md ├── fastPHASE2LDhat.pl ├── fastPHASE2VCF.pl ├── license.txt ├── thinVCF.pl ├── vcf2MS.pl ├── vcf2PHASE.pl ├── vcf2fastPHASE.pl ├── vcf2fastPHASE_4males.pl └── vcf_merge.pl /CreateChrBedFromVCF.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/CreateChrBedFromVCF.pl -------------------------------------------------------------------------------- /CreateChrBedFromVCF2.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/CreateChrBedFromVCF2.pl -------------------------------------------------------------------------------- /MS2LDhat.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/MS2LDhat.pl -------------------------------------------------------------------------------- /MS2PHASE.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/MS2PHASE.pl -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/README.md -------------------------------------------------------------------------------- /fastPHASE2LDhat.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/fastPHASE2LDhat.pl -------------------------------------------------------------------------------- /fastPHASE2VCF.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/fastPHASE2VCF.pl -------------------------------------------------------------------------------- /license.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/license.txt -------------------------------------------------------------------------------- /thinVCF.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/thinVCF.pl -------------------------------------------------------------------------------- /vcf2MS.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/vcf2MS.pl -------------------------------------------------------------------------------- /vcf2PHASE.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/vcf2PHASE.pl -------------------------------------------------------------------------------- /vcf2fastPHASE.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/vcf2fastPHASE.pl -------------------------------------------------------------------------------- /vcf2fastPHASE_4males.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/vcf2fastPHASE_4males.pl -------------------------------------------------------------------------------- /vcf_merge.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/lstevison/vcf-conversion-tools/HEAD/vcf_merge.pl --------------------------------------------------------------------------------