├── .gitattributes ├── .gitignore ├── .nojekyll ├── Glossary.pdf ├── LICENSE.md ├── MLtechrep.bib ├── README.md ├── _bookdown.yml ├── _bookdown_files └── introduction-to-machine-learning_files │ ├── figure-html │ ├── featureplot-1.png │ ├── featureplot-1.svg │ ├── ggsenate-1.svg │ ├── knn_lime-1.svg │ ├── knn_lime-2.svg │ ├── knnvarimp-1.svg │ ├── learning_curve-1.svg │ ├── min_depth_plot-1.svg │ ├── min_depth_plot-2.svg │ ├── other_imps_plot-1.svg │ ├── regregvarimp-1.svg │ ├── rf_lime-1.svg │ ├── rf_lime-2.svg │ ├── rf_lime_vis1-1.svg │ ├── rf_lime_vis1_clean-1.svg │ ├── rf_lime_vis2-1.svg │ ├── rf_lime_vis2_clean-1.svg │ ├── rf_pd_plot-1.svg │ ├── rf_pd_plot_true-1.svg │ ├── svm2d-1.svg │ ├── unnamed-chunk-2-1.svg │ └── unnamed-chunk-3-1.svg │ └── figure-html4 │ ├── featureplot-1.svg │ ├── regregvarimp-1.svg │ ├── svm2d-1.svg │ └── unnamed-chunk-2-1.svg ├── _build.sh ├── _deploy.sh ├── _output.yml ├── appendix.Rmd ├── black_box.ipynb ├── blackbox.Rmd ├── by-sa_4.0.txt ├── concepts.Rmd ├── css ├── book.css ├── old │ ├── mytufte.css │ ├── standard_html.css │ └── toc.css └── standard_html.css ├── data ├── Senate_Raw.csv ├── knn_explain.RData ├── results_knn.RData ├── results_nnet.RData ├── results_regreg.RData ├── results_rf.RData ├── results_svm.RData ├── results_xgb.RData ├── rf_explain.RData ├── rf_explainer_min_depth.RData ├── rf_ggrf_min_depth.RData ├── rf_variable_importance.RData ├── senate_graph (Nodes).csv ├── wine.csv ├── winequality-red.csv ├── winequality-white.csv └── winequality.names ├── docs ├── appendix.html ├── blackbox.html ├── concepts.html ├── css │ ├── book.css │ └── standard_html.css ├── img │ ├── 198R.png │ ├── ARC-acronym-signature.png │ ├── ARC_logos │ │ └── ARC-acronym-signature.png │ ├── CSCAR_logos │ │ └── signature-acronym.png │ ├── biasvar2.svg │ ├── biasvar_gp.svg │ ├── biasvartarget.svg │ ├── ccbysa.png │ ├── kfold.svg │ ├── learningcurve.svg │ ├── lossfuncs.png │ ├── lvmodel.png │ ├── mc.png │ ├── mc_logo.png │ ├── min_depth_1.png │ ├── min_depth_2.png │ ├── nineteeneightyR.png │ ├── nnet.png │ ├── senate.png │ ├── signature-acronym.png │ ├── svm3d.png │ ├── tree1.png │ └── tree2.png ├── index.html ├── intro.html ├── introduction-to-machine-learning_files │ └── figure-html │ │ ├── featureplot-1.svg │ │ ├── ggsenate-1.svg │ │ ├── knn_lime-1.svg │ │ ├── knn_lime-2.svg │ │ ├── learning_curve-1.svg │ │ ├── min_depth_plot-1.svg │ │ ├── min_depth_plot-2.svg │ │ ├── other_imps_plot-1.svg │ │ ├── regregvarimp-1.svg │ │ ├── rf_lime-1.svg │ │ ├── rf_lime-2.svg │ │ ├── rf_lime_vis1-1.svg │ │ ├── rf_lime_vis1_clean-1.svg │ │ ├── rf_lime_vis2-1.svg │ │ ├── rf_lime_vis2_clean-1.svg │ │ ├── rf_pd_plot-1.svg │ │ ├── rf_pd_plot_true-1.svg │ │ ├── svm2d-1.svg │ │ ├── unnamed-chunk-2-1.svg │ │ └── unnamed-chunk-3-1.svg ├── introduction.html ├── libs │ ├── DiagrammeR-styles-0.2 │ │ └── styles.css │ ├── crosstalk-1.0.0 │ │ ├── css │ │ │ └── crosstalk.css │ │ └── js │ │ │ └── crosstalk.min.js │ ├── d3-3.5.3 │ │ └── d3.min.js │ ├── d3-tip-0.6.6 │ │ └── index.js │ ├── d3heatmap-binding-0.6.1.1 │ │ └── d3heatmap.js │ ├── d3heatmap-binding-0.6.1.2 │ │ └── d3heatmap.js │ ├── d3heatmapcore-0.0.0 │ │ ├── heatmapcore.css │ │ └── heatmapcore.js │ ├── datatables-binding-0.2 │ │ └── datatables.js │ ├── datatables-binding-0.4 │ │ └── datatables.js │ ├── datatables-css-0.0.0 │ │ └── datatables-crosstalk.css │ ├── dt-core-1.10.12 │ │ ├── css │ │ │ ├── jquery.dataTables.extra.css │ │ │ └── jquery.dataTables.min.css │ │ └── js │ │ │ └── jquery.dataTables.min.js │ ├── dt-core-1.10.16 │ │ ├── css │ │ │ ├── jquery.dataTables.extra.css │ │ │ └── jquery.dataTables.min.css │ │ └── js │ │ │ └── jquery.dataTables.min.js │ ├── gitbook-2.6.7 │ │ ├── css │ │ │ ├── fontawesome │ │ │ │ └── fontawesome-webfont.ttf │ │ │ ├── plugin-bookdown.css │ │ │ ├── plugin-fontsettings.css │ │ │ ├── plugin-highlight.css │ │ │ ├── plugin-search.css │ │ │ ├── plugin-table.css │ │ │ └── style.css │ │ └── js │ │ │ ├── app.min.js │ │ │ ├── jquery.highlight.js │ │ │ ├── lunr.js │ │ │ ├── plugin-bookdown.js │ │ │ ├── plugin-fontsettings.js │ │ │ ├── plugin-search.js │ │ │ └── plugin-sharing.js │ ├── grViz-binding-0.9.2 │ │ └── grViz.js │ ├── grViz-binding-1.0.0 │ │ └── grViz.js │ ├── htmlwidgets-0.9 │ │ └── htmlwidgets.js │ ├── htmlwidgets-1.0 │ │ └── htmlwidgets.js │ ├── htmlwidgets-1.3 │ │ └── htmlwidgets.js │ ├── jquery-2.2.3 │ │ └── jquery.min.js │ ├── plotly-binding-4.7.1 │ │ └── plotly.js │ ├── plotly-binding-4.8.0 │ │ └── plotly.js │ ├── plotly-htmlwidgets-css-1.39.2 │ │ └── plotly-htmlwidgets.css │ ├── plotly-main-1.39.2 │ │ └── plotly-latest.min.js │ ├── plotlyjs-1.29.2 │ │ ├── plotly-htmlwidgets.css │ │ └── plotly-latest.min.js │ ├── typedarray-0.1 │ │ └── typedarray.min.js │ └── viz-0.3 │ │ └── viz.js ├── opening-the-black-box.html ├── other.html ├── preface.html ├── references.html ├── search_index.json └── wrap-up.html ├── img ├── 198R.png ├── 198R_small.png ├── ARC-acronym-signature.png ├── ARC_logos │ ├── ARC-acronym-signature-white.png │ ├── ARC-acronym-signature.png │ ├── signature-informal-white.png │ ├── signature-informal.png │ ├── signature-marketing-white.png │ ├── signature-marketing.png │ ├── signature-stationery-white - large copy.png │ ├── signature-stationery-white.png │ ├── signature-stationery.png │ ├── signature-vertical-white.png │ └── signature-vertical.png ├── CSCAR_logos │ ├── signature-acronym-white.png │ ├── signature-acronym.png │ ├── signature-marketing-white.png │ ├── signature-marketing.png │ ├── signature-social.png │ ├── signature-vertical-informal.png │ ├── signature-vertical-white.png │ └── signature-vertical.png ├── R.ico ├── biasvar2.svg ├── biasvar_gp.svg ├── biasvartarget.svg ├── ccbysa_compact.png ├── ccbysa_test.png ├── favicons.zip ├── kfold.svg ├── learningcurve.svg ├── lossfuncs.png ├── lvmodel.png ├── mc.png ├── mc_logo.png ├── mc_sunset_2.png ├── min_depth_1.png ├── min_depth_2.png ├── nineteeneightyR.png ├── nnet.png ├── readmeimg1.png ├── rf.png ├── senate.png ├── senate.svg ├── signature-acronym.png ├── svm2d_temp.svg ├── svm3d.png ├── svm3d_temp.png ├── svm3d_temp.svg ├── tree1.png └── tree2.png ├── index.Rmd ├── intro.Rmd ├── introduction-to-machine-learning.Rproj ├── marcio_workshop.ipynb ├── mlcrash.pdf ├── old.7z ├── original wine data paper.pdf ├── other.Rmd ├── preface.Rmd ├── python_demo.py ├── references.Rmd ├── refs.bib ├── workshop.zip └── workshop ├── data ├── results_knn.RData ├── results_nnet.RData ├── results_regreg.RData ├── results_rf.RData ├── results_svm.RData ├── results_xgb.RData └── wine.csv ├── python_examples ├── README.md ├── Workshop.ipynb ├── adult.csv ├── adult_notes.rtf └── wine.csv ├── workshop.Rproj └── worskhop_code.R /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/m-clark/introduction-to-machine-learning/HEAD/.gitattributes -------------------------------------------------------------------------------- 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