├── Code ├── CTCF.py ├── CTCF.pyc ├── entrance.py ├── genInteraction_new.py ├── genInteraction_new.pyc ├── genLabelData.py ├── genLabelData.pyc ├── genNegativeData.py ├── genNegativeData.pyc ├── genVecs.py ├── genVecs.pyc ├── processSeq.py ├── processSeq.pyc ├── train.py └── train.pyc ├── Data └── gm12878 │ ├── CTCF_age2 │ ├── CTCF_peak.bed │ ├── DNase_Duke.bed │ ├── fimo2.csv │ └── loop_from_Ch.csv ├── LICENSE ├── MA0139.1.meme └── README.md /Code/CTCF.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ma-compbio/CTCF-MP/HEAD/Code/CTCF.py -------------------------------------------------------------------------------- /Code/CTCF.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ma-compbio/CTCF-MP/HEAD/Code/CTCF.pyc -------------------------------------------------------------------------------- /Code/entrance.py: 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