├── .dockerignore ├── .github ├── ISSUE_TEMPLATE.md └── ISSUE_TEMPLATE │ ├── Browser.md │ └── Data_Question.md ├── .gitignore ├── ADMIN.md ├── CHANGELOG.md ├── LICENSE ├── README.md ├── deploy ├── dockerfiles │ ├── cloudscripts │ │ ├── copy-and-hold.sh │ │ ├── create-tabix-indexes.sh │ │ └── load-metrics.sh │ ├── gnomadbase.dockerfile │ ├── gnomadcopyreadviz.dockerfile │ ├── gnomadload.dockerfile │ ├── gnomadprecalculate.dockerfile │ ├── gnomadserve.dockerfile │ └── gnomadtabix.dockerfile ├── scripts │ ├── api.sh │ ├── copyreadviz.sh │ ├── create-disk.sh │ ├── images-build.sh │ ├── images-push.sh │ ├── load.sh │ ├── precalculate.sh │ ├── render.py │ ├── serve.sh │ ├── start-load-cluster.sh │ ├── start-serve-cluster.sh │ ├── tabix.sh │ ├── takedown-load.sh │ ├── takedown-serve.sh │ └── test.sh └── templates │ ├── template-config.sh │ ├── template-copy-readviz-pod.yaml │ ├── template-graphql-deployment.yaml │ ├── template-ingress.yaml │ ├── template-load-pod.yaml │ ├── template-mongo-controller.yaml │ ├── template-mongo-service.yaml │ ├── template-precalculate-pod.yaml │ ├── template-serve-rc.yaml │ └── template-tabix-pod.yaml ├── download_canonical_genes.pl ├── exac.py ├── genes_to_cache.txt ├── get_genes_by_var_count.py ├── gnomad ├── .babelrc ├── .eslintrc.json ├── config │ └── default.js ├── package.json ├── src │ ├── constants │ │ ├── categoryDefinitions.js │ │ ├── index.js │ │ ├── variantPageFields.js │ │ └── variantsTableFields.js │ └── services │ │ ├── combineDataForTable.js │ │ ├── combineForVariantPage.js │ │ ├── combineVariantData.js │ │ └── index.js ├── test │ ├── exac-gnomad │ │ ├── combineDataForTable-spec.js │ │ ├── gene-api-spec.js │ │ └── variant-api-spec.js │ ├── exac │ │ ├── consequence-filtering-spec.js │ │ ├── dbsnp-api-spec.js │ │ ├── gene-api-spec.js │ │ ├── region-api-spec.js │ │ ├── transcript-api-spec.js │ │ └── variant-api-spec.js │ ├── exampleData │ │ ├── gnomadVariantMaybe.js │ │ ├── metricsExample.js │ │ └── variantDataExample.js │ ├── mocha.opts │ └── scratchpad.js └── webpack.config.build.js ├── lookups.py ├── manage.py ├── parsing.py ├── requirements.txt ├── src └── precompute_histogram.py ├── static ├── bootstrap-theme.min.css ├── bootstrap.min.css ├── bootstrap.min.js ├── css │ ├── font-awesome.min.css │ └── igv.css ├── d3.v3.min.js ├── exac.js ├── fonts │ ├── FontAwesome.otf │ ├── fontawesome-webfont.eot │ ├── fontawesome-webfont.svg │ ├── fontawesome-webfont.ttf │ └── fontawesome-webfont.woff ├── igv.js ├── igv.min.js ├── images │ ├── exac_404_ripped_page.jpg │ └── exac_pca3.gif ├── index.js ├── jquery-1.11.1.min.js ├── jquery.tablesorter.min.js ├── jquery.tablesorter.pager.js ├── style.css ├── theme.default.css ├── typeahead.bundle.js ├── typeahead.bundle.min.js ├── typeaheadjs.css └── underscore-min.js ├── templates ├── about.html ├── contact.html ├── coverage_selectors.html ├── downloads.html ├── downloads_down.html ├── error.html ├── faq.html ├── gene.html ├── homepage.html ├── layout.html ├── not_found.html ├── region.html ├── region_display.html ├── report_variant.html ├── terms.html ├── thank_you.html ├── transcript.html ├── transcript_display.html ├── utils.html ├── variant.html ├── variant_consequences.html ├── variant_details.html ├── variant_selectors.html ├── variant_table.html └── variant_table_template.html ├── utils.py └── wsgi.py /.dockerignore: -------------------------------------------------------------------------------- 1 | gnomad 2 | node_modules -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/.github/ISSUE_TEMPLATE.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/Browser.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/.github/ISSUE_TEMPLATE/Browser.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/Data_Question.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/.github/ISSUE_TEMPLATE/Data_Question.md -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/.gitignore -------------------------------------------------------------------------------- /ADMIN.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/ADMIN.md -------------------------------------------------------------------------------- /CHANGELOG.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/CHANGELOG.md -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/README.md -------------------------------------------------------------------------------- /deploy/dockerfiles/cloudscripts/copy-and-hold.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/cloudscripts/copy-and-hold.sh -------------------------------------------------------------------------------- /deploy/dockerfiles/cloudscripts/create-tabix-indexes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/cloudscripts/create-tabix-indexes.sh -------------------------------------------------------------------------------- /deploy/dockerfiles/cloudscripts/load-metrics.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/cloudscripts/load-metrics.sh -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadbase.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadbase.dockerfile -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadcopyreadviz.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadcopyreadviz.dockerfile -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadload.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadload.dockerfile -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadprecalculate.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadprecalculate.dockerfile -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadserve.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadserve.dockerfile -------------------------------------------------------------------------------- /deploy/dockerfiles/gnomadtabix.dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/dockerfiles/gnomadtabix.dockerfile -------------------------------------------------------------------------------- /deploy/scripts/api.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/api.sh -------------------------------------------------------------------------------- /deploy/scripts/copyreadviz.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/copyreadviz.sh -------------------------------------------------------------------------------- /deploy/scripts/create-disk.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/create-disk.sh -------------------------------------------------------------------------------- /deploy/scripts/images-build.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/images-build.sh -------------------------------------------------------------------------------- /deploy/scripts/images-push.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/images-push.sh -------------------------------------------------------------------------------- /deploy/scripts/load.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/load.sh -------------------------------------------------------------------------------- /deploy/scripts/precalculate.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/precalculate.sh -------------------------------------------------------------------------------- /deploy/scripts/render.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/render.py -------------------------------------------------------------------------------- /deploy/scripts/serve.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/serve.sh -------------------------------------------------------------------------------- /deploy/scripts/start-load-cluster.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/start-load-cluster.sh -------------------------------------------------------------------------------- /deploy/scripts/start-serve-cluster.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/start-serve-cluster.sh -------------------------------------------------------------------------------- /deploy/scripts/tabix.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/tabix.sh -------------------------------------------------------------------------------- /deploy/scripts/takedown-load.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/takedown-load.sh -------------------------------------------------------------------------------- /deploy/scripts/takedown-serve.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/takedown-serve.sh -------------------------------------------------------------------------------- /deploy/scripts/test.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/scripts/test.sh -------------------------------------------------------------------------------- /deploy/templates/template-config.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-config.sh -------------------------------------------------------------------------------- /deploy/templates/template-copy-readviz-pod.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-copy-readviz-pod.yaml -------------------------------------------------------------------------------- /deploy/templates/template-graphql-deployment.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-graphql-deployment.yaml -------------------------------------------------------------------------------- /deploy/templates/template-ingress.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-ingress.yaml -------------------------------------------------------------------------------- /deploy/templates/template-load-pod.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-load-pod.yaml -------------------------------------------------------------------------------- /deploy/templates/template-mongo-controller.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-mongo-controller.yaml -------------------------------------------------------------------------------- /deploy/templates/template-mongo-service.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-mongo-service.yaml -------------------------------------------------------------------------------- /deploy/templates/template-precalculate-pod.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-precalculate-pod.yaml -------------------------------------------------------------------------------- /deploy/templates/template-serve-rc.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-serve-rc.yaml -------------------------------------------------------------------------------- /deploy/templates/template-tabix-pod.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/deploy/templates/template-tabix-pod.yaml -------------------------------------------------------------------------------- /download_canonical_genes.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/download_canonical_genes.pl -------------------------------------------------------------------------------- /exac.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/exac.py -------------------------------------------------------------------------------- /genes_to_cache.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/genes_to_cache.txt -------------------------------------------------------------------------------- /get_genes_by_var_count.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/get_genes_by_var_count.py -------------------------------------------------------------------------------- /gnomad/.babelrc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/.babelrc -------------------------------------------------------------------------------- /gnomad/.eslintrc.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/.eslintrc.json -------------------------------------------------------------------------------- /gnomad/config/default.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/config/default.js -------------------------------------------------------------------------------- /gnomad/package.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/package.json -------------------------------------------------------------------------------- /gnomad/src/constants/categoryDefinitions.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/constants/categoryDefinitions.js -------------------------------------------------------------------------------- /gnomad/src/constants/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/constants/index.js -------------------------------------------------------------------------------- /gnomad/src/constants/variantPageFields.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/constants/variantPageFields.js -------------------------------------------------------------------------------- /gnomad/src/constants/variantsTableFields.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/constants/variantsTableFields.js -------------------------------------------------------------------------------- /gnomad/src/services/combineDataForTable.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/services/combineDataForTable.js -------------------------------------------------------------------------------- /gnomad/src/services/combineForVariantPage.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/services/combineForVariantPage.js -------------------------------------------------------------------------------- /gnomad/src/services/combineVariantData.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/services/combineVariantData.js -------------------------------------------------------------------------------- /gnomad/src/services/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/src/services/index.js -------------------------------------------------------------------------------- /gnomad/test/exac-gnomad/combineDataForTable-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac-gnomad/combineDataForTable-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac-gnomad/gene-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac-gnomad/gene-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac-gnomad/variant-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac-gnomad/variant-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/consequence-filtering-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/consequence-filtering-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/dbsnp-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/dbsnp-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/gene-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/gene-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/region-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/region-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/transcript-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/transcript-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exac/variant-api-spec.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exac/variant-api-spec.js -------------------------------------------------------------------------------- /gnomad/test/exampleData/gnomadVariantMaybe.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exampleData/gnomadVariantMaybe.js -------------------------------------------------------------------------------- /gnomad/test/exampleData/metricsExample.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exampleData/metricsExample.js -------------------------------------------------------------------------------- /gnomad/test/exampleData/variantDataExample.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/exampleData/variantDataExample.js -------------------------------------------------------------------------------- /gnomad/test/mocha.opts: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/test/mocha.opts -------------------------------------------------------------------------------- /gnomad/test/scratchpad.js: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /gnomad/webpack.config.build.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/gnomad/webpack.config.build.js -------------------------------------------------------------------------------- /lookups.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/lookups.py -------------------------------------------------------------------------------- /manage.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/manage.py -------------------------------------------------------------------------------- /parsing.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/parsing.py -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/requirements.txt -------------------------------------------------------------------------------- /src/precompute_histogram.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/src/precompute_histogram.py -------------------------------------------------------------------------------- /static/bootstrap-theme.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/bootstrap-theme.min.css -------------------------------------------------------------------------------- /static/bootstrap.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/bootstrap.min.css -------------------------------------------------------------------------------- /static/bootstrap.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/bootstrap.min.js -------------------------------------------------------------------------------- /static/css/font-awesome.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/css/font-awesome.min.css -------------------------------------------------------------------------------- /static/css/igv.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/css/igv.css -------------------------------------------------------------------------------- /static/d3.v3.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/d3.v3.min.js -------------------------------------------------------------------------------- /static/exac.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/exac.js -------------------------------------------------------------------------------- /static/fonts/FontAwesome.otf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/fonts/FontAwesome.otf -------------------------------------------------------------------------------- /static/fonts/fontawesome-webfont.eot: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/fonts/fontawesome-webfont.eot -------------------------------------------------------------------------------- /static/fonts/fontawesome-webfont.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/fonts/fontawesome-webfont.svg -------------------------------------------------------------------------------- /static/fonts/fontawesome-webfont.ttf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/fonts/fontawesome-webfont.ttf -------------------------------------------------------------------------------- /static/fonts/fontawesome-webfont.woff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/fonts/fontawesome-webfont.woff -------------------------------------------------------------------------------- /static/igv.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/igv.js -------------------------------------------------------------------------------- /static/igv.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/igv.min.js -------------------------------------------------------------------------------- /static/images/exac_404_ripped_page.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/images/exac_404_ripped_page.jpg -------------------------------------------------------------------------------- /static/images/exac_pca3.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/images/exac_pca3.gif -------------------------------------------------------------------------------- /static/index.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/index.js -------------------------------------------------------------------------------- /static/jquery-1.11.1.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/jquery-1.11.1.min.js -------------------------------------------------------------------------------- /static/jquery.tablesorter.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/jquery.tablesorter.min.js -------------------------------------------------------------------------------- /static/jquery.tablesorter.pager.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/jquery.tablesorter.pager.js -------------------------------------------------------------------------------- /static/style.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/style.css -------------------------------------------------------------------------------- /static/theme.default.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/theme.default.css -------------------------------------------------------------------------------- /static/typeahead.bundle.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/typeahead.bundle.js -------------------------------------------------------------------------------- /static/typeahead.bundle.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/typeahead.bundle.min.js -------------------------------------------------------------------------------- /static/typeaheadjs.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/typeaheadjs.css -------------------------------------------------------------------------------- /static/underscore-min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/static/underscore-min.js -------------------------------------------------------------------------------- /templates/about.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/about.html -------------------------------------------------------------------------------- /templates/contact.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/contact.html -------------------------------------------------------------------------------- /templates/coverage_selectors.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/coverage_selectors.html -------------------------------------------------------------------------------- /templates/downloads.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/downloads.html -------------------------------------------------------------------------------- /templates/downloads_down.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/downloads_down.html -------------------------------------------------------------------------------- /templates/error.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/error.html -------------------------------------------------------------------------------- /templates/faq.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/faq.html -------------------------------------------------------------------------------- /templates/gene.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/gene.html -------------------------------------------------------------------------------- /templates/homepage.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/homepage.html -------------------------------------------------------------------------------- /templates/layout.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/layout.html -------------------------------------------------------------------------------- /templates/not_found.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/not_found.html -------------------------------------------------------------------------------- /templates/region.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/region.html -------------------------------------------------------------------------------- /templates/region_display.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/region_display.html -------------------------------------------------------------------------------- /templates/report_variant.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/report_variant.html -------------------------------------------------------------------------------- /templates/terms.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/terms.html -------------------------------------------------------------------------------- /templates/thank_you.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/thank_you.html -------------------------------------------------------------------------------- /templates/transcript.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/transcript.html -------------------------------------------------------------------------------- /templates/transcript_display.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/transcript_display.html -------------------------------------------------------------------------------- /templates/utils.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/utils.html -------------------------------------------------------------------------------- /templates/variant.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant.html -------------------------------------------------------------------------------- /templates/variant_consequences.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant_consequences.html -------------------------------------------------------------------------------- /templates/variant_details.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant_details.html -------------------------------------------------------------------------------- /templates/variant_selectors.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant_selectors.html -------------------------------------------------------------------------------- /templates/variant_table.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant_table.html -------------------------------------------------------------------------------- /templates/variant_table_template.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/templates/variant_table_template.html -------------------------------------------------------------------------------- /utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/utils.py -------------------------------------------------------------------------------- /wsgi.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/macarthur-lab/gnomad_browser/HEAD/wsgi.py --------------------------------------------------------------------------------