├── LICENSE ├── README.md ├── actinn_format.py ├── actinn_predict.py ├── tSNE_Example ├── R_tSNE_Plot_by_Seurat.R ├── R_tSNE_Plot_by_Seurat3.R └── tSNE_Plot.png └── test_data ├── test_set.h5 ├── train_label.txt.gz ├── train_set.csv.gz ├── train_set.h5 ├── train_set.txt.gz └── train_set_10x ├── barcodes.tsv ├── genes.tsv └── matrix.mtx /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/README.md -------------------------------------------------------------------------------- /actinn_format.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/actinn_format.py -------------------------------------------------------------------------------- /actinn_predict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/actinn_predict.py -------------------------------------------------------------------------------- /tSNE_Example/R_tSNE_Plot_by_Seurat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/tSNE_Example/R_tSNE_Plot_by_Seurat.R -------------------------------------------------------------------------------- /tSNE_Example/R_tSNE_Plot_by_Seurat3.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/tSNE_Example/R_tSNE_Plot_by_Seurat3.R -------------------------------------------------------------------------------- /tSNE_Example/tSNE_Plot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/tSNE_Example/tSNE_Plot.png -------------------------------------------------------------------------------- /test_data/test_set.h5: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/test_set.h5 -------------------------------------------------------------------------------- /test_data/train_label.txt.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_label.txt.gz -------------------------------------------------------------------------------- /test_data/train_set.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set.csv.gz -------------------------------------------------------------------------------- /test_data/train_set.h5: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set.h5 -------------------------------------------------------------------------------- /test_data/train_set.txt.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set.txt.gz -------------------------------------------------------------------------------- /test_data/train_set_10x/barcodes.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set_10x/barcodes.tsv -------------------------------------------------------------------------------- /test_data/train_set_10x/genes.tsv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set_10x/genes.tsv -------------------------------------------------------------------------------- /test_data/train_set_10x/matrix.mtx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mafeiyang/ACTINN/HEAD/test_data/train_set_10x/matrix.mtx --------------------------------------------------------------------------------