├── .gitignore ├── .travis.yml ├── Dynamics ├── CalculationWindow.py ├── GenionWindow.py ├── GromacsInput.py ├── GromacsOutput.py ├── InterpretationWindow.py ├── MdpConfig.py ├── ProgressStatus.py ├── RestraintsWindow.py ├── SimulationParameters.py ├── Vectors.py ├── WaterWindows.py ├── __init__.py ├── pymol_plugin_dynamics.py └── version.py ├── LICENSE ├── README ├── debian ├── changelog ├── compat ├── control ├── copyright └── rules ├── manual.odt └── tests ├── __init__.py ├── basic_simulation_test.py ├── gromacs_ver_test.py ├── init_test.py ├── requirements.txt ├── run.sh └── unit_tests.py /.gitignore: -------------------------------------------------------------------------------- 1 | # Compiled python code 2 | *.pyc 3 | __pycache__/ 4 | -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/makson96/Dynamics/HEAD/.travis.yml 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