├── .github ├── CODE_OF_CONDUCT.rst ├── ISSUE_TEMPLATE │ ├── bug-report.md │ └── feature_request.md ├── dependabot.yml └── workflows │ ├── ci.yml │ └── pypi-publish.yml ├── .gitignore ├── .readthedocs.yaml ├── CHANGES.rst ├── Corrfunc ├── __init__.py ├── io.py ├── mocks │ ├── DDrppi_mocks.py │ ├── DDsmu_mocks.py │ ├── DDtheta_mocks.py │ ├── __init__.py │ └── vpf_mocks.py ├── tests │ ├── __init__.py │ ├── common.py │ ├── test_mocks.py │ └── test_theory.py ├── theory │ ├── DD.py │ ├── DDrppi.py │ ├── DDsmu.py │ ├── __init__.py │ ├── vpf.py │ ├── wp.py │ └── xi.py └── utils.py ├── FAQ ├── LICENSE ├── MANIFEST.in ├── Makefile ├── README.rst ├── common.mk ├── corrfunc_logo.png ├── docs ├── Makefile └── source │ ├── all-interfaces.rst │ ├── api │ ├── Corrfunc.mocks.rst │ ├── Corrfunc.rst │ ├── Corrfunc.theory.rst │ └── modules.rst │ ├── apidoc.sh │ ├── commandline-interface.rst │ ├── conf.py │ ├── corrfunc-logo-no-text.ico │ ├── corrfunc_logo_320px_240px.png │ ├── development │ ├── bug_reports.rst │ ├── citing_corrfunc.rst │ ├── contributing.rst │ ├── contributors.rst │ ├── index.rst │ └── staying_up_to_date.rst │ ├── index.rst │ ├── install.rst │ ├── modules │ ├── computing_wp_and_xi.rst │ ├── converting_3d_counts.rst │ ├── converting_ddtheta_mocks.rst │ ├── converting_rp_pi_counts.rst │ ├── converting_rp_pi_mocks.rst │ ├── custom_weighting.rst │ ├── fast_food_binary.rst │ ├── generate_bins.rst │ ├── index.rst │ ├── mock_functions.rst │ ├── read_catalog.rst │ ├── rr_autocorrelations.rst │ ├── theory_functions.rst │ ├── weighted_correlations.rst │ └── which_corrfunc.rst │ ├── python-interface.rst │ ├── quickstart.rst │ ├── requirements.txt │ └── staticlibrary-interface.rst ├── io ├── Makefile ├── ftread.c ├── ftread.h ├── io.c └── io.h ├── mocks.options ├── mocks ├── DDrppi_mocks │ ├── DDrppi_mocks.c │ ├── Makefile │ ├── countpairs_rp_pi_mocks.c │ ├── countpairs_rp_pi_mocks.h │ ├── countpairs_rp_pi_mocks_impl.c.src │ ├── countpairs_rp_pi_mocks_impl.h.src │ ├── countpairs_rp_pi_mocks_kernels.c.src │ └── wprp_mocks.c ├── DDsmu_mocks │ ├── DDsmu_mocks.c │ ├── Makefile │ ├── countpairs_s_mu_mocks.c │ ├── countpairs_s_mu_mocks.h │ ├── countpairs_s_mu_mocks_impl.c.src │ ├── countpairs_s_mu_mocks_impl.h.src │ └── countpairs_s_mu_mocks_kernels.c.src ├── DDtheta_mocks │ ├── DDtheta_mocks.c │ ├── Makefile │ ├── countpairs_theta_mocks.c │ ├── countpairs_theta_mocks.h │ ├── countpairs_theta_mocks_impl.c.src │ ├── countpairs_theta_mocks_impl.h.src │ ├── countpairs_theta_mocks_kernels.c.src │ └── wtheta.c ├── Makefile ├── benchmarks │ ├── timings_Mr19_mocks_openmp.eps │ ├── timings_Mr19_mocks_openmp.tex │ ├── timings_Mr19_mocks_rmax.eps │ ├── timings_Mr19_mocks_rmax.pdf │ └── timings_Mr19_mocks_rmax.txt ├── examples │ ├── Makefile │ └── run_correlations_mocks.c ├── python_bindings │ ├── Makefile │ ├── _countpairs_mocks.c │ └── call_correlation_functions_mocks.py ├── tests │ ├── Makefile │ ├── Mr19_mock.DD │ ├── Mr19_mock.DR │ ├── Mr19_mock_DDsmu.DR │ ├── Mr19_mock_DDsmu.RR │ ├── Mr19_mock_vpf │ ├── Mr19_mock_wtheta.DD │ ├── Mr19_mock_wtheta.DR │ ├── Mr19_randoms_vpf │ ├── angular_bins │ ├── bins │ ├── data │ │ ├── Mr19_centers_xyz_forVPF_rmax_10Mpc.txt │ │ ├── Mr19_mock_northonly.rdcz.dat │ │ ├── Mr19_mock_northonly.rdcz.ff │ │ └── Mr19_randoms_northonly.rdcz.ff │ └── tests_mocks.c └── vpf_mocks │ ├── Makefile │ ├── countspheres_mocks.c │ ├── countspheres_mocks.h │ ├── countspheres_mocks_impl.c.src │ ├── countspheres_mocks_impl.h.src │ ├── vpf_mocks.c │ └── vpf_mocks_kernels.c.src ├── paper ├── figures │ └── generate_sphere_grid.py ├── scripts │ ├── codes_scaling_numpart.npz │ ├── codes_scaling_numpart_parallel.npz │ ├── cute_box_param.txt │ ├── generate_code_comparison.py │ ├── generate_nthreads_scaling.py │ ├── generate_numpart_scaling.py │ ├── generate_rmax_scaling.py │ ├── get_speedups.py │ ├── mocks_scaling_nthreads.npz │ ├── mocks_scaling_nthreads_stampede_icc15.npz │ ├── mocks_scaling_nthreads_stampede_icc15_after_weights.npz │ ├── mocks_scaling_numpart.npz │ ├── mocks_scaling_numpart_stampede_icc15_after_weights.npz │ ├── mocks_scaling_rmax.npz │ ├── mocks_scaling_rmax_stampede_icc15.npz │ ├── mocks_scaling_rmax_stampede_icc15_after_weights.npz │ ├── runtimes_bender_icc14.npz │ ├── runtimes_stampede_icc15.npz │ ├── swot_config.txt │ ├── theory_scaling_nthreads.npz │ ├── theory_scaling_nthreads_stampede_icc15.npz │ ├── theory_scaling_nthreads_stampede_icc15_after_weights.npz │ ├── theory_scaling_numpart.npz │ ├── theory_scaling_numpart_stampede_icc15_after_weights.npz │ ├── theory_scaling_rmax.npz │ ├── theory_scaling_rmax_stampede_icc15.npz │ ├── theory_scaling_rmax_stampede_icc15_after_weights.npz │ └── utils.py └── tables │ ├── timings_Mr19_numpart_theory_simd_speedup.tex │ ├── timings_Mr19_openmp_mocks.tex │ ├── timings_Mr19_openmp_theory.tex │ └── timings_Mr19_rmax_theory_simd_speedup.tex ├── rules.mk ├── setup.py ├── theory.options ├── theory ├── DD │ ├── DD.c │ ├── Makefile │ ├── countpairs.c │ ├── countpairs.h │ ├── countpairs_impl.c.src │ ├── countpairs_impl.h.src │ ├── countpairs_kernels.c.src │ └── xi_of_r_scaling_Mr19.png ├── DDrppi │ ├── DDrppi.c │ ├── Makefile │ ├── countpairs_rp_pi.c │ ├── countpairs_rp_pi.h │ ├── countpairs_rp_pi_impl.c.src │ ├── countpairs_rp_pi_impl.h.src │ ├── countpairs_rp_pi_kernels.c.src │ ├── wprp.c │ └── xi_rp_pi_scaling_Mr19.png ├── DDsmu │ ├── DDsmu.c │ ├── Makefile │ ├── countpairs_s_mu.c │ ├── countpairs_s_mu.h │ ├── countpairs_s_mu_impl.c.src │ ├── countpairs_s_mu_impl.h.src │ └── countpairs_s_mu_kernels.c.src ├── Makefile ├── README.rst ├── benchmarks │ ├── timings_Mr19_numpart.eps │ ├── timings_Mr19_numpart.pdf │ ├── timings_Mr19_numpart.txt │ ├── timings_Mr19_openmp.eps │ ├── timings_Mr19_openmp.pdf │ ├── timings_Mr19_openmp.tex │ ├── timings_Mr19_openmp.txt │ ├── timings_Mr19_rmax.eps │ ├── timings_Mr19_rmax.pdf │ └── timings_Mr19_rmax.txt ├── bins ├── examples │ ├── Makefile │ └── run_correlations.c ├── logbins.c ├── python_bindings │ ├── Makefile │ ├── _countpairs.c │ └── call_correlation_functions.py ├── tests │ ├── Makefile │ ├── Mr19_DD_nonperiodic │ ├── Mr19_DD_periodic │ ├── Mr19_DDrppi_nonperiodic │ ├── Mr19_DDrppi_periodic │ ├── Mr19_DDsmu_nonperiodic │ ├── Mr19_DDsmu_periodic │ ├── Mr19_vpf_periodic │ ├── Mr19_wp │ ├── Mr19_xi │ ├── bins │ ├── cmass_DD_periodic │ ├── cmass_DR_nonperiodic │ ├── cmass_DR_periodic │ ├── cmass_RR_periodic │ ├── data │ │ ├── cmassmock_Zspace.ff │ │ ├── gals_Mr19.ff │ │ └── random_Zspace.ff │ ├── test_nonperiodic.c │ └── test_periodic.c ├── vpf │ ├── Makefile │ ├── countspheres.c │ ├── countspheres.h │ ├── countspheres_impl.c.src │ ├── countspheres_impl.h.src │ ├── vpf.c │ └── vpf_kernels.c.src ├── wp │ ├── Makefile │ ├── countpairs_wp.c │ ├── countpairs_wp.h │ ├── countpairs_wp_impl.c.src │ ├── countpairs_wp_impl.h.src │ ├── wp.c │ ├── wp_kernels.c.src │ └── wp_scaling_Mr19.png └── xi │ ├── Makefile │ ├── countpairs_xi.c │ ├── countpairs_xi.h │ ├── countpairs_xi_impl.c.src │ ├── 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