├── .dep.inc ├── .dockerignore ├── .gitattributes ├── .gitignore ├── ARMADILLO_NOTICE.txt ├── CMakeLists.txt ├── Dockerfile ├── LICENSE ├── Makefile ├── R └── gpgomea.R ├── README.md ├── Tests └── TestsSemanticBackpropagation.h ├── deps_fedora ├── deps_ubuntu ├── environment.yml ├── examples ├── R │ ├── cv_example.R │ └── quickstart.R └── python │ ├── examplepythonprob.py │ ├── grid_search.py │ ├── quickstart.py │ └── test.py ├── params ├── params_gomea.txt ├── params_multiobj.txt ├── params_pythonprob.txt ├── params_semback.txt └── params_sgp.txt ├── pythonpkg ├── pyGPGOMEA.egg-info │ ├── PKG-INFO │ ├── SOURCES.txt │ ├── dependency_links.txt │ ├── requires.txt │ └── top_level.txt ├── pyGPGOMEA │ ├── GPGOMEARegressor.py │ └── __init__.py ├── requirements.txt └── setup.py ├── srbench_results.png └── src ├── CMakeLists.txt ├── Evolution ├── CMakeLists.txt ├── EvolutionRun.cpp ├── EvolutionState.cpp ├── GenerationHandler.cpp ├── NSGA2GenerationHandler.cpp └── PopulationInitializer.cpp ├── Fitness ├── AccuracyFitness.cpp ├── CMakeLists.txt ├── Fitness.cpp ├── InterpretabilityPHIFitness.cpp ├── MOFitness.cpp ├── PythonFitness.cpp ├── SolutionSizeFitness.cpp └── SymbolicRegressionFitness.cpp ├── GOMEA ├── CMakeLists.txt ├── GOMEAFOS.cpp ├── GOMEAGenerationHandler.cpp ├── GOMEATreeInitializer.cpp └── GOMVariator.cpp ├── Genotype ├── CMakeLists.txt └── Node.cpp ├── Include └── GPGOMEA │ ├── Evolution │ ├── EvolutionRun.h │ ├── EvolutionState.h │ ├── GenerationHandler.h │ ├── NSGA2GenerationHandler.h │ └── PopulationInitializer.h │ ├── Fitness │ ├── AccuracyFitness.h │ ├── Fitness.h │ ├── InterpretabilityPHIFitness.h │ ├── MOFitness.h │ ├── PythonFitness.h │ ├── SolutionSizeFitness.h │ └── SymbolicRegressionFitness.h │ ├── GOMEA │ ├── GOMEAFOS.h │ ├── GOMEAGenerationHandler.h │ ├── GOMEATreeInitializer.h │ └── GOMVariator.h │ ├── Genotype │ └── Node.h │ ├── Operators │ ├── Boolean │ │ ├── OpAnd.h │ │ ├── OpNand.h │ │ ├── OpNor.h │ │ ├── OpNot.h │ │ ├── OpOr.h │ │ └── OpXor.h │ ├── OpVariable.h │ ├── Operator.h │ └── Regression │ │ ├── OpAnalyticLog_01.h │ │ ├── OpAnalyticQuotient.h │ │ ├── OpAnalyticQuotient_01.h │ │ ├── OpCos.h │ │ ├── OpExp.h │ │ ├── OpLog.h │ │ ├── OpMinus.h │ │ ├── OpNewProtectedDivision.h │ │ ├── OpPlus.h │ │ ├── OpRegrConstant.h │ │ ├── OpSin.h │ │ ├── OpSquare.h │ │ ├── OpSquareRoot.h │ │ └── OpTimes.h │ ├── RunHandling │ └── IMSHandler.h │ ├── Selection │ └── TournamentSelection.h │ ├── Semantics │ ├── SemanticBackpropagator.h │ ├── SemanticLibrary.h │ └── TestDerivatives.h │ ├── Utils │ ├── ConfigurationOptions.h │ ├── Exceptions.h │ ├── KDTree.h │ ├── Logger.h │ └── Utils.h │ └── Variation │ ├── SubtreeVariator.h │ └── TreeInitializer.h ├── Operators ├── CMakeLists.txt └── Operator.cpp ├── RunHandling ├── CMakeLists.txt └── IMSHandler.cpp ├── Selection ├── CMakeLists.txt └── TournamentSelection.cpp ├── Semantics ├── CMakeLists.txt ├── SemanticBackpropagator.cpp └── SemanticLibrary.cpp ├── Utils ├── CMakeLists.txt ├── KDTree.cpp 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