├── .Rbuildignore ├── .Rprofile ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── README.md ├── _site.yml ├── docs ├── index.html ├── lesson1-tasks.html ├── lesson1.html ├── lesson2-tasks.html ├── lesson2.html ├── lesson2_files │ └── figure-html │ │ ├── density-underdetermined-1.png │ │ └── density-underdetermined-2.png ├── lesson3-tasks.html ├── lesson3.html ├── lesson4-tasks.html ├── lesson4.html ├── lesson5.html ├── lesson6.html ├── site_libs │ ├── bootstrap-3.3.5 │ │ ├── css │ │ │ ├── bootstrap-theme.css │ │ │ ├── bootstrap-theme.css.map │ │ │ ├── bootstrap-theme.min.css │ │ │ ├── bootstrap.css │ │ │ ├── bootstrap.css.map │ │ │ ├── bootstrap.min.css │ │ │ ├── cerulean.min.css │ │ │ ├── cosmo.min.css │ │ │ ├── darkly.min.css │ │ │ ├── flatly.min.css │ │ │ ├── fonts │ │ │ │ ├── Lato.ttf │ │ │ │ ├── LatoBold.ttf │ │ │ │ ├── LatoItalic.ttf │ │ │ │ ├── NewsCycle.ttf │ │ │ │ ├── NewsCycleBold.ttf │ │ │ │ ├── OpenSans.ttf │ │ │ │ ├── OpenSansBold.ttf │ │ │ │ ├── OpenSansBoldItalic.ttf │ │ │ │ ├── OpenSansItalic.ttf │ │ │ │ ├── OpenSansLight.ttf │ │ │ │ ├── OpenSansLightItalic.ttf │ │ │ │ ├── Raleway.ttf │ │ │ │ ├── RalewayBold.ttf │ │ │ │ ├── Roboto.ttf │ │ │ │ ├── RobotoBold.ttf │ │ │ │ ├── RobotoLight.ttf │ │ │ │ ├── RobotoMedium.ttf │ │ │ │ ├── SourceSansPro.ttf │ │ │ │ ├── SourceSansProBold.ttf │ │ │ │ ├── SourceSansProItalic.ttf │ │ │ │ ├── SourceSansProLight.ttf │ │ │ │ └── Ubuntu.ttf │ │ │ ├── journal.min.css │ │ │ ├── lumen.min.css │ │ │ ├── paper.min.css │ │ │ ├── readable.min.css │ │ │ ├── sandstone.min.css │ │ │ ├── simplex.min.css │ │ │ ├── spacelab.min.css │ │ │ ├── united.min.css │ │ │ └── yeti.min.css │ │ ├── fonts │ │ │ ├── glyphicons-halflings-regular.eot │ │ │ ├── glyphicons-halflings-regular.svg │ │ │ ├── glyphicons-halflings-regular.ttf │ │ │ ├── glyphicons-halflings-regular.woff │ │ │ └── glyphicons-halflings-regular.woff2 │ │ ├── js │ │ │ ├── bootstrap.js │ │ │ ├── bootstrap.min.js │ │ │ └── npm.js │ │ └── shim │ │ │ ├── html5shiv.min.js │ │ │ └── respond.min.js │ ├── header-attrs-2.25 │ │ └── header-attrs.js │ ├── highlightjs-9.12.0 │ │ ├── default.css │ │ ├── highlight.js │ │ └── textmate.css │ ├── jquery-3.6.0 │ │ ├── jquery-3.6.0.js │ │ ├── jquery-3.6.0.min.js │ │ └── jquery-3.6.0.min.map │ └── navigation-1.1 │ │ ├── codefolding-lua.css │ │ ├── codefolding.js │ │ ├── sourceembed.js │ │ └── tabsets.js └── stan │ ├── lesson1 │ ├── initial.stan │ └── with_sigma_prior.stan │ └── lesson2 │ └── neg_binom.stan ├── index.Rmd ├── lesson1-tasks.Rmd ├── lesson1.Rmd ├── lesson2-tasks.Rmd ├── lesson2.Rmd ├── lesson3-tasks.Rmd ├── lesson3.Rmd ├── lesson4-tasks.Rmd ├── lesson4.Rmd ├── lesson5.Rmd ├── lesson6.Rmd ├── modelling-in-stan-2024.Rproj ├── renv.lock ├── renv ├── .gitignore ├── activate.R └── settings.json ├── solutions ├── lesson1-solutions.Rmd └── lesson2-solutions.Rmd └── stan ├── lesson1 ├── initial.stan └── with_sigma_prior.stan └── lesson2 └── neg_binom.stan /.Rbuildignore: 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