├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── NAMESPACE ├── R ├── data.R ├── makeMovieObject.R ├── plotLinePlot.R ├── plotMoviePlotGrid.R ├── plotMoviePlots.R ├── plots.R └── scaleFunction.R ├── README.md ├── data └── mccares.RData ├── inst └── long_vignettes │ ├── CVAnalysisWorkflow.Rmd │ └── CVAnalysisWorkflow.html ├── man ├── cvContribution_CNV_MCCA.Rd ├── cvContribution_RNA_MCCA.Rd ├── cvContribution_miRNA_MCCA.Rd ├── foldMem.Rd ├── fullContribution_CNV_MCCA.Rd ├── fullContribution_RNA_MCCA.Rd ├── fullContribution_miRNA_MCCA.Rd ├── makeMovieObject.Rd └── plot.movie.Rd └── vignettes ├── movie.R ├── movie.Rmd └── movie.html /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- 1 | .Rproj.user 2 | .Rhistory 3 | .RData 4 | inst/doc 5 | -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/data.R -------------------------------------------------------------------------------- /R/makeMovieObject.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/makeMovieObject.R -------------------------------------------------------------------------------- /R/plotLinePlot.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/plotLinePlot.R -------------------------------------------------------------------------------- /R/plotMoviePlotGrid.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/plotMoviePlotGrid.R -------------------------------------------------------------------------------- /R/plotMoviePlots.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/plotMoviePlots.R -------------------------------------------------------------------------------- /R/plots.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/plots.R -------------------------------------------------------------------------------- /R/scaleFunction.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/R/scaleFunction.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/README.md -------------------------------------------------------------------------------- /data/mccares.RData: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/data/mccares.RData -------------------------------------------------------------------------------- /inst/long_vignettes/CVAnalysisWorkflow.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/inst/long_vignettes/CVAnalysisWorkflow.Rmd -------------------------------------------------------------------------------- /inst/long_vignettes/CVAnalysisWorkflow.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/inst/long_vignettes/CVAnalysisWorkflow.html -------------------------------------------------------------------------------- /man/cvContribution_CNV_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/cvContribution_CNV_MCCA.Rd -------------------------------------------------------------------------------- /man/cvContribution_RNA_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/cvContribution_RNA_MCCA.Rd -------------------------------------------------------------------------------- /man/cvContribution_miRNA_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/cvContribution_miRNA_MCCA.Rd -------------------------------------------------------------------------------- /man/foldMem.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/foldMem.Rd -------------------------------------------------------------------------------- /man/fullContribution_CNV_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/fullContribution_CNV_MCCA.Rd -------------------------------------------------------------------------------- /man/fullContribution_RNA_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/fullContribution_RNA_MCCA.Rd -------------------------------------------------------------------------------- /man/fullContribution_miRNA_MCCA.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/fullContribution_miRNA_MCCA.Rd -------------------------------------------------------------------------------- /man/makeMovieObject.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/makeMovieObject.Rd -------------------------------------------------------------------------------- /man/plot.movie.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/man/plot.movie.Rd -------------------------------------------------------------------------------- /vignettes/movie.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/vignettes/movie.R -------------------------------------------------------------------------------- /vignettes/movie.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/vignettes/movie.Rmd -------------------------------------------------------------------------------- /vignettes/movie.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mccabes292/movie/HEAD/vignettes/movie.html --------------------------------------------------------------------------------