├── .clang-format ├── .gitignore ├── CMakeLists.txt ├── COPYING.txt ├── README.md ├── data ├── bowtiefilters │ ├── bowtiefilters.json │ └── bowtiefilters.json.template ├── icons │ ├── icon.ico │ ├── icon.png │ ├── icon.rc │ ├── icon_fill.bmp │ ├── icon_fill.png │ ├── settings.png │ └── settings.svg └── phantoms │ ├── icrp │ ├── 00F │ │ ├── 00F_binary.dat │ │ ├── 00F_blood.dat │ │ ├── 00F_media.dat │ │ ├── 00F_organs.dat │ │ └── 00F_skeleton.dat │ ├── 00M │ │ ├── 00M_binary.dat │ │ ├── 00M_blood.dat │ │ ├── 00M_media.dat │ │ ├── 00M_organs.dat │ │ └── 00M_skeleton.dat │ ├── 01F │ │ ├── 01F_binary.dat │ │ ├── 01F_blood.dat │ │ ├── 01F_media.dat │ │ ├── 01F_organs.dat │ │ └── 01F_skeleton.dat │ ├── 01M │ │ ├── 01M_binary.dat │ │ ├── 01M_blood.dat │ │ ├── 01M_media.dat │ │ ├── 01M_organs.dat │ │ └── 01M_skeleton.dat │ ├── 05F │ │ ├── 05F_binary.dat │ │ ├── 05F_blood.dat │ │ ├── 05F_media.dat │ │ ├── 05F_organs.dat │ │ └── 05F_skeleton.dat │ ├── 05M │ │ ├── 05M_binary.dat │ │ ├── 05M_blood.dat │ │ ├── 05M_media.dat │ │ ├── 05M_organs.dat │ │ └── 05M_skeleton.dat │ ├── 10F │ │ ├── 10F_binary.dat │ │ ├── 10F_blood.dat │ │ ├── 10F_media.dat │ │ ├── 10F_organs.dat │ │ └── 10F_skeleton.dat │ ├── 10M │ │ ├── 10M_binary.dat │ │ ├── 10M_blood.dat │ │ ├── 10M_media.dat │ │ ├── 10M_organs.dat │ │ └── 10M_skeleton.dat │ ├── 15F │ │ ├── 15F_binary.dat │ │ ├── 15F_blood.dat │ │ ├── 15F_media.dat │ │ ├── 15F_organs.dat │ │ └── 15F_skeleton.dat │ ├── 15M │ │ ├── 15M_binary.dat │ │ ├── 15M_blood.dat │ │ ├── 15M_media.dat │ │ ├── 15M_organs.dat │ │ └── 15M_skeleton.dat │ ├── AF │ │ ├── AF_binary.dat │ │ ├── AF_blood.dat │ │ ├── AF_media.dat │ │ ├── AF_organs.dat │ │ └── AF_spongiosa.dat │ └── AM │ │ ├── AM_binary.dat │ │ ├── AM_blood.dat │ │ ├── AM_media.dat │ │ ├── AM_organs.dat │ │ └── AM_spongiosa.dat │ └── other │ ├── Baby_organs.dat │ ├── Child_organs.dat │ ├── Donna_organs.dat │ ├── Frank_organs.dat │ ├── Golem_organs.dat │ ├── Helga_organs.dat │ ├── Irene_organs.dat │ ├── Jo_organs.dat │ ├── Katja_organs.dat │ ├── Vishum_organs.dat │ └── media.dat ├── docs ├── CMakeLists.txt ├── Doxyfile.in └── screenshot │ └── dethorax.png ├── src ├── .directory ├── app │ ├── CMakeLists.txt │ ├── basesettingswidget.cpp │ ├── basesettingswidget.hpp │ ├── beamsettingswidget.cpp │ ├── beamsettingswidget.hpp │ ├── ctdicomimportwidget.cpp │ ├── ctdicomimportwidget.hpp │ ├── icrpphantomimportwidget.cpp │ ├── icrpphantomimportwidget.hpp │ ├── mainwindow.cpp │ ├── mainwindow.hpp │ ├── openxraymc.cpp │ ├── otherphantomimportwidget.cpp │ ├── otherphantomimportwidget.hpp │ ├── statusbar.cpp │ └── statusbar.hpp └── libopenxraymc │ ├── CMakeLists.txt │ ├── basepipeline.cpp │ ├── basepipeline.hpp │ ├── beamactorcontainer.cpp │ ├── beamactorcontainer.hpp │ ├── beamsettingsdelegate.cpp │ ├── beamsettingsdelegate.hpp │ ├── beamsettingsmodel.cpp │ ├── beamsettingsmodel.hpp │ ├── beamsettingsview.cpp │ ├── beamsettingsview.hpp │ ├── bowtiefilterreader.cpp │ ├── bowtiefilterreader.hpp │ ├── colormaps.cpp │ ├── colormaps.hpp │ ├── ctaecplot.cpp │ ├── ctaecplot.hpp │ ├── ctimageimportpipeline.cpp │ ├── ctimageimportpipeline.hpp │ ├── ctorgansegmentatorpipeline.cpp │ ├── ctorgansegmentatorpipeline.hpp │ ├── ctsegmentationpipeline.cpp │ ├── ctsegmentationpipeline.hpp │ ├── custominteractorstyleimage.cpp │ ├── custominteractorstyleimage.hpp │ ├── datacontainer.cpp │ ├── datacontainer.hpp │ ├── dosetablepipeline.cpp │ ├── dosetablepipeline.hpp │ ├── dosetablewidget.cpp │ ├── dosetablewidget.hpp │ ├── h5io.cpp │ ├── h5io.hpp │ ├── hdf5wrapper.cpp │ ├── hdf5wrapper.hpp │ ├── icrpphantomimportpipeline.cpp │ ├── icrpphantomimportpipeline.hpp │ ├── niftiwrapper.cpp │ ├── niftiwrapper.hpp │ ├── otherphantomimportpipeline.cpp │ ├── otherphantomimportpipeline.hpp │ ├── renderwidgetscollection.cpp │ ├── renderwidgetscollection.hpp │ ├── simulationpipeline.cpp │ ├── simulationpipeline.hpp │ ├── simulationwidget.cpp │ ├── simulationwidget.hpp │ ├── slicerenderwidget.cpp │ ├── 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